- Gene ID
- Bathy08g04100
- Locus
- Bathy08g04100
- Functional Description
- thioredoxin
- Gene Type
- protein-coding gene
- Contig
- bathy_chrom_08
- Last Modified On
- 12 July 2011 21h39
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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pico-PLAZA - lookup this gene in the PLAZA resource |
Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- thioredoxin
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
n/a
- Biological Process
-
1.
cell redox homeostasis
Protein Domains
Protein Homologs
ProteinID | Description / BlastScore | Database | Actions |
XP_001420234.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 7e-41 | Bitscore: 170 Identities = 80/108 (74%), Positives = 94/108 (87%), Gaps = 2/108 (2%) |
NCBI |
Show Blast
|
XP_002509120.1 |
thioredoxin-like protein [Micromonas sp. RCC299]
Evalue: 3e-35 | Bitscore: 151 Identities = 71/107 (66%), Positives = 85/107 (79%), Gaps = 2/107 (2%) |
NCBI |
Show Blast
|
XP_003061642.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 1e-34 | Bitscore: 149 Identities = 71/107 (66%), Positives = 83/107 (78%), Gaps = 2/107 (2%) |
NCBI |
Show Blast
|
XP_002971310.1 |
hypothetical protein SELMODRAFT_94818 [Selaginella moellendorffii]
Evalue: 3e-19 | Bitscore: 98 Identities = 44/82 (54%), Positives = 59/82 (72%), Gaps = 1/82 (1%) |
NCBI |
Show Blast
|
XP_002961497.1 |
hypothetical protein SELMODRAFT_77812 [Selaginella moellendorffii]
Evalue: 9e-19 | Bitscore: 96 Identities = 43/80 (54%), Positives = 58/80 (73%), Gaps = 1/80 (1%) |
NCBI |
Show Blast
|
ABK21872.1 |
unknown [Picea sitchensis]
Evalue: 6e-18 | Bitscore: 94 Identities = 44/88 (50%), Positives = 57/88 (65%), Gaps = 1/88 (1%) |
NCBI |
Show Blast
|
CBJ29912.1 |
flagellar outer arm dynein 14 kDa light chain LC5 [Ectocarpus siliculosus]
Evalue: 7e-16 | Bitscore: 87 Identities = 42/97 (43%), Positives = 63/97 (65%), Gaps = 2/97 (2%) |
NCBI |
Show Blast
|
XP_001780075.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 5e-15 | Bitscore: 84 Identities = 38/80 (48%), Positives = 54/80 (68%), Gaps = 1/80 (1%) |
NCBI |
Show Blast
|
XP_001781911.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 7e-15 | Bitscore: 83 Identities = 39/80 (49%), Positives = 55/80 (69%), Gaps = 1/80 (1%) |
NCBI |
Show Blast
|
XP_002287462.1 |
thioredoxin f [Thalassiosira pseudonana CCMP1335]
Evalue: 2e-14 | Bitscore: 82 Identities = 40/90 (44%), Positives = 59/90 (66%), Gaps = 2/90 (2%) |
NCBI |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
XP_001420234.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 7e-41 | Bitscore: 170 Identities = 80/108 (74%), Positives = 94/108 (87%), Gaps = 2/108 (2%) |
NCBI |
Show Blast
|
XP_002509120.1 |
thioredoxin-like protein [Micromonas sp. RCC299]
Evalue: 3e-35 | Bitscore: 151 Identities = 71/107 (66%), Positives = 85/107 (79%), Gaps = 2/107 (2%) |
NCBI |
Show Blast
|
XP_003061642.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 1e-34 | Bitscore: 149 Identities = 71/107 (66%), Positives = 83/107 (78%), Gaps = 2/107 (2%) |
NCBI |
Show Blast
|
XP_002971310.1 |
hypothetical protein SELMODRAFT_94818 [Selaginella moellendorffii]
Evalue: 3e-19 | Bitscore: 98 Identities = 44/82 (54%), Positives = 59/82 (72%), Gaps = 1/82 (1%) |
NCBI |
Show Blast
|
XP_002961497.1 |
hypothetical protein SELMODRAFT_77812 [Selaginella moellendorffii]
Evalue: 9e-19 | Bitscore: 96 Identities = 43/80 (54%), Positives = 58/80 (73%), Gaps = 1/80 (1%) |
NCBI |
Show Blast
|
ABK21872.1 |
unknown [Picea sitchensis]
Evalue: 6e-18 | Bitscore: 94 Identities = 44/88 (50%), Positives = 57/88 (65%), Gaps = 1/88 (1%) |
NCBI |
Show Blast
|
CBJ29912.1 |
flagellar outer arm dynein 14 kDa light chain LC5 [Ectocarpus siliculosus]
Evalue: 7e-16 | Bitscore: 87 Identities = 42/97 (43%), Positives = 63/97 (65%), Gaps = 2/97 (2%) |
NCBI |
Show Blast
|
XP_001780075.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 5e-15 | Bitscore: 84 Identities = 38/80 (48%), Positives = 54/80 (68%), Gaps = 1/80 (1%) |
NCBI |
Show Blast
|
XP_001781911.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 7e-15 | Bitscore: 83 Identities = 39/80 (49%), Positives = 55/80 (69%), Gaps = 1/80 (1%) |
NCBI |
Show Blast
|
XP_002287462.1 |
thioredoxin f [Thalassiosira pseudonana CCMP1335]
Evalue: 2e-14 | Bitscore: 82 Identities = 40/90 (44%), Positives = 59/90 (66%), Gaps = 2/90 (2%) |
NCBI |
Show Blast
|
No hits found against database Self with an e-value better than 1e-3. |
ProteinID | Description / BlastScore | Database | Actions |
O48897 |
Thioredoxin F-type, chloroplastic OS=Brassica napus GN=TRXF PE=2 SV=1
Evalue: 1e-12 | Bitscore: 72 Identities = 37/97 (38%), Positives = 58/97 (59%), Gaps = 3/97 (3%) |
SwissP |
Show Blast
|
Q9XFH8 |
Thioredoxin F1, chloroplastic OS=Arabidopsis thaliana GN=At3g02730 PE=1 SV=2
Evalue: 4e-12 | Bitscore: 70 Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 3/97 (3%) |
SwissP |
Show Blast
|
Q9XFH9 |
Thioredoxin F2, chloroplastic OS=Arabidopsis thaliana GN=At5g16400 PE=2 SV=1
Evalue: 4e-11 | Bitscore: 67 Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 3/97 (3%) |
SwissP |
Show Blast
|
P09856 |
Thioredoxin F-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2
Evalue: 5e-11 | Bitscore: 67 Identities = 36/102 (35%), Positives = 56/102 (54%), Gaps = 3/102 (2%) |
SwissP |
Show Blast
|
P29450 |
Thioredoxin F-type, chloroplastic OS=Pisum sativum PE=2 SV=1
Evalue: 2e-10 | Bitscore: 64 Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 3/95 (3%) |
SwissP |
Show Blast
|
Q8S091 |
Thioredoxin F, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0913000 PE=2 SV=1
Evalue: 5e-10 | Bitscore: 63 Identities = 33/101 (32%), Positives = 59/101 (58%), Gaps = 3/101 (2%) |
SwissP |
Show Blast
|
O14463 |
Thioredoxin-1 OS=Schizosaccharomyces pombe GN=trx1 PE=2 SV=3
Evalue: 5e-10 | Bitscore: 63 Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 5/107 (4%) |
SwissP |
Show Blast
|
P08629 |
Thioredoxin OS=Gallus gallus GN=TXN PE=3 SV=2
Evalue: 1e-09 | Bitscore: 62 Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 5/106 (4%) |
SwissP |
Show Blast
|
Q9USR1 |
Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe GN=txl1 PE=2 SV=1
Evalue: 5e-09 | Bitscore: 60 Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 4/86 (4%) |
SwissP |
Show Blast
|
O65049 |
Thioredoxin H-type OS=Picea mariana GN=SB09 PE=2 SV=1
Evalue: 8e-09 | Bitscore: 59 Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 4/84 (4%) |
SwissP |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Alternative Models
- n/a
-
Protein
Associated ESTs/cDNAs
- n/a
-
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