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Bathycoccus prasinos


Gene ID
Bathy08g02690
Locus
Bathy08g02690
Functional Description
glutathione-s-transferase (ISS)
Gene Type
protein-coding gene
Contig
bathy_chrom_08
Last Modified On
12 July 2011 21h39
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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pico-PLAZA - lookup this gene in the PLAZA resource

Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
glutathione-s-transferase (ISS)
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
n/a
Molecular Function
1.
protein binding

Biological Process
n/a

Protein Domains 


Domain IDDescriptionDatabase
IPR012335 Thioredoxin fold InterPro
PTHR11571 FAMILY NOT NAMED HMMPanther
IPR010987 Glutathione S-transferase, C-terminal-like InterPro
IPR004046 Glutathione S-transferase, C-terminal InterPro
IPR017933 Glutathione S-transferase/chloride channel, C-terminal InterPro
IPR004045 Glutathione S-transferase, N-terminal InterPro
IPR012336 Thioredoxin-like fold InterPro

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
XP_003078868.1 glutathione-s-transferase (ISS) [Ostreococcus tauri]
Evalue: 2e-32 | Bitscore: 144
Identities = 89/240 (37%), Positives = 136/240 (57%), Gaps = 26/240 (11%)
NCBI
Show Blast
XP_001417544.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 5e-29 | Bitscore: 132
Identities = 84/241 (35%), Positives = 123/241 (51%), Gaps = 26/241 (11%)
NCBI
Show Blast
AAT09082.1 glutathione-s-transferase [Bigelowiella natans]
Evalue: 1e-25 | Bitscore: 121
Identities = 81/255 (32%), Positives = 123/255 (48%), Gaps = 48/255 (19%)
NCBI
Show Blast
EGB12293.1 hypothetical protein AURANDRAFT_19765 [Aureococcus anophagefferens]
Evalue: 3e-23 | Bitscore: 113
Identities = 76/245 (31%), Positives = 117/245 (48%), Gaps = 29/245 (12%)
NCBI
Show Blast
ACJ06748.1 glutathione S-transferase mu class protein [Crassostrea ariakensis]
Evalue: 5e-16 | Bitscore: 89
Identities = 73/249 (29%), Positives = 120/249 (48%), Gaps = 43/249 (17%)
NCBI
Show Blast
CAD90167.1 mu class glutathione S-transferase [Crassostrea gigas]
Evalue: 6e-16 | Bitscore: 89
Identities = 80/253 (32%), Positives = 121/253 (48%), Gaps = 55/253 (22%)
NCBI
Show Blast
ABS32297.1 glutathione S-transferase class mu [Cyphoma gibbosum]
Evalue: 2e-15 | Bitscore: 87
Identities = 77/254 (30%), Positives = 120/254 (47%), Gaps = 57/254 (22%)
NCBI
Show Blast
EFX88321.1 hypothetical protein DAPPUDRAFT_305501 [Daphnia pulex]
Evalue: 3e-14 | Bitscore: 83
Identities = 72/242 (30%), Positives = 109/242 (45%), Gaps = 38/242 (16%)
NCBI
Show Blast
ABY87352.1 glutathione-S-transferase isoform [Haliotis diversicolor]
Evalue: 3e-14 | Bitscore: 83
Identities = 75/253 (30%), Positives = 117/253 (46%), Gaps = 51/253 (20%)
NCBI
Show Blast
ABS32298.1 glutathione S-transferase class mu [Cyphoma gibbosum]
Evalue: 8e-14 | Bitscore: 82
Identities = 73/251 (29%), Positives = 117/251 (47%), Gaps = 51/251 (20%)
NCBI
Show Blast

Gene Structure 

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Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
-
Structure Quality
2

Alternative Models  

n/a
 

CDS  

Locus ID
Bathy08g02690
Redo Blast
CDS Length
858 nucleotides
CDS Sequence

Protein 

Locus ID
Bathy08g02690
Redo Blast
Protein Length
286 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

n/a