- Gene ID
- Bathy08g01030
- Locus
- Bathy08g01030
- Functional Description
- VCBS
- Gene Type
- protein-coding gene
- Contig
- bathy_chrom_08
- Last Modified On
- 12 July 2011 21h39
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
Sorry, only history comparison allowed for non logged in users!! |
Compare this version with : Go! |
Link Out
pico-PLAZA - lookup this gene in the PLAZA resource |
Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- VCBS
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- n/a
-
Protein Domains
Domain ID | Description | Database |
IPR018247 |
EF-Hand 1, calcium-binding site |
InterPro |
IPR018249 |
EF-HAND 2 |
InterPro |
IPR013320 |
Concanavalin A-like lectin/glucanase, subgroup |
InterPro |
Protein Homologs
ProteinID | Description / BlastScore | Database | Actions |
ZP_01691552.1 |
conserved hypothetical protein [Microscilla marina ATCC 23134]
Evalue: 1e-16 | Bitscore: 92 Identities = 61/179 (34%), Positives = 92/179 (51%), Gaps = 7/179 (4%) |
NCBI |
Show Blast
|
ZP_04604577.1 |
hypothetical protein MCAG_00834 [Micromonospora sp. ATCC 39149]
Evalue: 4e-15 | Bitscore: 87 Identities = 62/208 (30%), Positives = 102/208 (49%), Gaps = 17/208 (8%) |
NCBI |
Show Blast
|
CAM76811.1 |
HEMAGGLUTININ/HEMOLYSIN-RELATED PROTEIN [Magnetospirillum gryphiswaldense MSR-1]
Evalue: 8e-13 | Bitscore: 79 Identities = 61/186 (33%), Positives = 94/186 (51%), Gaps = 20/186 (11%) |
NCBI |
Show Blast
|
ZP_01623702.1 |
hypothetical protein L8106_29050 [Lyngbya sp. PCC 8106]
Evalue: 1e-12 | Bitscore: 79 Identities = 60/210 (29%), Positives = 98/210 (47%), Gaps = 12/210 (6%) |
NCBI |
Show Blast
|
EGF24533.1 |
protein containing Cadherin domain [Rhodopirellula baltica WH47]
Evalue: 3e-12 | Bitscore: 77 Identities = 59/203 (29%), Positives = 93/203 (46%), Gaps = 13/203 (6%) |
NCBI |
Show Blast
|
NP_490410.1 |
hypothetical protein alr7304 [Nostoc sp. PCC 7120]
Evalue: 4e-12 | Bitscore: 77 Identities = 67/228 (29%), Positives = 100/228 (44%), Gaps = 28/228 (12%) |
NCBI |
Show Blast
|
NP_864533.1 |
hypothetical protein RB1661 [Rhodopirellula baltica SH 1]
Evalue: 1e-11 | Bitscore: 75 Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 13/203 (6%) |
NCBI |
Show Blast
|
ZP_08220466.1 |
hypothetical protein SclaA2_31927 [Streptomyces clavuligerus ATCC 27064]
Evalue: 3e-10 | Bitscore: 70 Identities = 41/125 (33%), Positives = 65/125 (52%), Gaps = 12/125 (10%) |
NCBI |
Show Blast
|
ZP_06775577.1 |
Hypothetical protein SCLAV_p0395 [Streptomyces clavuligerus ATCC 27064]
Evalue: 4e-10 | Bitscore: 70 Identities = 41/125 (33%), Positives = 65/125 (52%), Gaps = 12/125 (10%) |
NCBI |
Show Blast
|
ADI18641.1 |
rtx toxins and related ca2+-binding proteins [uncultured Rhodospirillales bacterium HF4000_24M03]
Evalue: 4e-10 | Bitscore: 70 Identities = 52/209 (25%), Positives = 105/209 (50%), Gaps = 15/209 (7%) |
NCBI |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
ZP_01691552.1 |
conserved hypothetical protein [Microscilla marina ATCC 23134]
Evalue: 1e-16 | Bitscore: 92 Identities = 61/179 (34%), Positives = 92/179 (51%), Gaps = 7/179 (4%) |
NCBI |
Show Blast
|
ZP_04604577.1 |
hypothetical protein MCAG_00834 [Micromonospora sp. ATCC 39149]
Evalue: 4e-15 | Bitscore: 87 Identities = 62/208 (30%), Positives = 102/208 (49%), Gaps = 17/208 (8%) |
NCBI |
Show Blast
|
CAM76811.1 |
HEMAGGLUTININ/HEMOLYSIN-RELATED PROTEIN [Magnetospirillum gryphiswaldense MSR-1]
Evalue: 8e-13 | Bitscore: 79 Identities = 61/186 (33%), Positives = 94/186 (51%), Gaps = 20/186 (11%) |
NCBI |
Show Blast
|
ZP_01623702.1 |
hypothetical protein L8106_29050 [Lyngbya sp. PCC 8106]
Evalue: 1e-12 | Bitscore: 79 Identities = 60/210 (29%), Positives = 98/210 (47%), Gaps = 12/210 (6%) |
NCBI |
Show Blast
|
EGF24533.1 |
protein containing Cadherin domain [Rhodopirellula baltica WH47]
Evalue: 3e-12 | Bitscore: 77 Identities = 59/203 (29%), Positives = 93/203 (46%), Gaps = 13/203 (6%) |
NCBI |
Show Blast
|
NP_490410.1 |
hypothetical protein alr7304 [Nostoc sp. PCC 7120]
Evalue: 4e-12 | Bitscore: 77 Identities = 67/228 (29%), Positives = 100/228 (44%), Gaps = 28/228 (12%) |
NCBI |
Show Blast
|
NP_864533.1 |
hypothetical protein RB1661 [Rhodopirellula baltica SH 1]
Evalue: 1e-11 | Bitscore: 75 Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 13/203 (6%) |
NCBI |
Show Blast
|
ZP_08220466.1 |
hypothetical protein SclaA2_31927 [Streptomyces clavuligerus ATCC 27064]
Evalue: 3e-10 | Bitscore: 70 Identities = 41/125 (33%), Positives = 65/125 (52%), Gaps = 12/125 (10%) |
NCBI |
Show Blast
|
ZP_06775577.1 |
Hypothetical protein SCLAV_p0395 [Streptomyces clavuligerus ATCC 27064]
Evalue: 4e-10 | Bitscore: 70 Identities = 41/125 (33%), Positives = 65/125 (52%), Gaps = 12/125 (10%) |
NCBI |
Show Blast
|
ADI18641.1 |
rtx toxins and related ca2+-binding proteins [uncultured Rhodospirillales bacterium HF4000_24M03]
Evalue: 4e-10 | Bitscore: 70 Identities = 52/209 (25%), Positives = 105/209 (50%), Gaps = 15/209 (7%) |
NCBI |
Show Blast
|
No hits found against database Self with an e-value better than 1e-3. |
No hits found against database SwissP with an e-value better than 1e-3. |
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Alternative Models
- n/a
-
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
EST ID | SuperContig_6.clus22.Contig1 |
Support Model | Y |
More Info |
Mapping Location | 179567..180144 |
Strand + |
|