Logo bioIT Logo VIB Logo Ugent Logo ElixirBE
Contact:
Bioinformatics Gent
Principal Investigator:

ORCAE Technical Support:

Bathycoccus prasinos


Gene ID
Bathy07g02800
Locus
Bathy07g02800
Functional Description
DSBA oxidoreductase
Gene Type
protein-coding gene
Contig
bathy_chrom_07
Last Modified On
12 July 2011 21h39
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

Sorry, only history comparison allowed for non logged in users!! Compare this version with :
Go!

Link Out  

pico-PLAZA - lookup this gene in the PLAZA resource

Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
DSBA oxidoreductase
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

n/a
 

Protein Domains 


Domain IDDescriptionDatabase
IPR001853 DSBA-like thioredoxin domain InterPro
IPR012335 Thioredoxin fold InterPro

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
XP_003054851.1 DSBA oxidoreductase [Micromonas pusilla CCMP1545]
Evalue: 4e-79 | Bitscore: 298
Identities = 145/225 (64%), Positives = 172/225 (76%), Gaps = 3/225 (1%)		 NCBI
Show Blast
XP_001420657.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 4e-76 | Bitscore: 288
Identities = 135/224 (60%), Positives = 171/224 (76%), Gaps = 3/224 (1%)		 NCBI
Show Blast
XP_002507485.1 DSBA oxidoreductase [Micromonas sp. RCC299]
Evalue: 4e-74 | Bitscore: 281
Identities = 138/229 (60%), Positives = 167/229 (73%), Gaps = 4/229 (2%)		 NCBI
Show Blast
XP_003082347.1 COG2761: Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis (ISS) [Ostreococcus tauri]
Evalue: 6e-73 | Bitscore: 278
Identities = 138/212 (65%), Positives = 166/212 (78%), Gaps = 4/212 (2%)		 NCBI
Show Blast
EGB12444.1 selenoprotein [Aureococcus anophagefferens]
Evalue: 7e-54 | Bitscore: 214
Identities = 119/227 (52%), Positives = 150/227 (66%), Gaps = 7/227 (3%)		 NCBI
Show Blast
XP_002177135.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Evalue: 5e-47 | Bitscore: 191
Identities = 102/227 (45%), Positives = 133/227 (59%), Gaps = 11/227 (5%)		 NCBI
Show Blast
ZP_05739935.1 dsba oxidoreductase [Silicibacter sp. TrichCH4B]
Evalue: 3e-13 | Bitscore: 79
Identities = 59/197 (30%), Positives = 96/197 (49%), Gaps = 23/197 (12%)		 NCBI
Show Blast
YP_613342.1 DSBA oxidoreductase [Ruegeria sp. TM1040]
Evalue: 1e-11 | Bitscore: 74
Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 19/193 (10%)		 NCBI
Show Blast
XP_002117541.1 hypothetical protein TRIADDRAFT_61605 [Trichoplax adhaerens]
Evalue: 1e-11 | Bitscore: 74
Identities = 50/159 (31%), Positives = 88/159 (55%), Gaps = 10/159 (6%)		 NCBI
Show Blast
ZP_00954997.1 DSBA-like thioredoxin family protein [Sulfitobacter sp. EE-36]
Evalue: 4e-11 | Bitscore: 72
Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 17/186 (9%)		 NCBI
Show Blast

Gene Structure 

View in GenomeView|View in Artemini


Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
-
Structure Quality
2

Alternative Models  

n/a
 

CDS  

Locus ID
Bathy07g02800
Redo Blast
CDS Length
711 nucleotides
CDS Sequence

Protein 

Locus ID
Bathy07g02800
Redo Blast
Protein Length
237 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

View in GenomeView|View in Artemini


EST IDSuperContig_5.clus457.Contig1 Support ModelY More Info