- Gene ID
- Bathy07g02740
- Locus
- Bathy07g02740
- Functional Description
- predicted protein
- Gene Type
- protein-coding gene
- Contig
- bathy_chrom_07
- Last Modified On
- 12 July 2011 21h39
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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pico-PLAZA - lookup this gene in the PLAZA resource |
Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- predicted protein
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- n/a
-
Protein Domains
Domain ID | Description | Database |
IPR004123 |
mRNA splicing factor, thioredoxin-like U5 snRNP |
InterPro |
IPR012335 |
Thioredoxin fold |
InterPro |
IPR012336 |
Thioredoxin-like fold |
InterPro |
Protein Homologs
ProteinID | Description / BlastScore | Database | Actions |
XP_003054835.1 |
mitosis protein DIM1/U5snRNP-specific component [Micromonas pusilla CCMP1545]
Evalue: 2e-67 | Bitscore: 258 Identities = 116/142 (82%), Positives = 132/142 (93%), Gaps = 0/142 (0%) |
NCBI |
Show Blast
|
XP_001420660.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 6e-66 | Bitscore: 253 Identities = 115/142 (81%), Positives = 127/142 (89%), Gaps = 0/142 (0%) |
NCBI |
Show Blast
|
XP_418903.1 |
PREDICTED: similar to Dim1p homolog isoform 2 [Gallus gallus]
Evalue: 2e-65 | Bitscore: 251 Identities = 113/142 (80%), Positives = 128/142 (90%), Gaps = 0/142 (0%) |
NCBI |
Show Blast
|
NP_006692.1 |
thioredoxin-like protein 4A [Homo sapiens]
Evalue: 2e-65 | Bitscore: 251 Identities = 112/142 (79%), Positives = 128/142 (90%), Gaps = 0/142 (0%) |
NCBI |
Show Blast
|
XP_001771732.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 2e-65 | Bitscore: 251 Identities = 114/142 (80%), Positives = 128/142 (90%), Gaps = 0/142 (0%) |
NCBI |
Show Blast
|
XP_002507532.1 |
mitosis protein DIM1/U5snRNP-specific component [Micromonas sp. RCC299]
Evalue: 3e-65 | Bitscore: 251 Identities = 112/142 (79%), Positives = 130/142 (92%), Gaps = 0/142 (0%) |
NCBI |
Show Blast
|
NP_001016646.1 |
thioredoxin-like 4A [Xenopus (Silurana) tropicalis]
Evalue: 3e-65 | Bitscore: 251 Identities = 113/142 (80%), Positives = 128/142 (90%), Gaps = 0/142 (0%) |
NCBI |
Show Blast
|
NP_001069528.1 |
thioredoxin-like protein 4A [Bos taurus]
Evalue: 4e-65 | Bitscore: 250 Identities = 112/142 (79%), Positives = 128/142 (90%), Gaps = 0/142 (0%) |
NCBI |
Show Blast
|
EFN51050.1 |
thioredoxin domain 2 [Chlorella variabilis]
Evalue: 4e-65 | Bitscore: 250 Identities = 115/142 (81%), Positives = 128/142 (90%), Gaps = 0/142 (0%) |
NCBI |
Show Blast
|
XP_002723903.1 |
PREDICTED: thioredoxin-like 4A [Oryctolagus cuniculus]
Evalue: 5e-65 | Bitscore: 250 Identities = 112/142 (79%), Positives = 127/142 (89%), Gaps = 0/142 (0%) |
NCBI |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
XP_003054835.1 |
mitosis protein DIM1/U5snRNP-specific component [Micromonas pusilla CCMP1545]
Evalue: 2e-67 | Bitscore: 258 Identities = 116/142 (82%), Positives = 132/142 (93%), Gaps = 0/142 (0%) |
NCBI |
Show Blast
|
XP_001420660.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 6e-66 | Bitscore: 253 Identities = 115/142 (81%), Positives = 127/142 (89%), Gaps = 0/142 (0%) |
NCBI |
Show Blast
|
XP_418903.1 |
PREDICTED: similar to Dim1p homolog isoform 2 [Gallus gallus]
Evalue: 2e-65 | Bitscore: 251 Identities = 113/142 (80%), Positives = 128/142 (90%), Gaps = 0/142 (0%) |
NCBI |
Show Blast
|
NP_006692.1 |
thioredoxin-like protein 4A [Homo sapiens]
Evalue: 2e-65 | Bitscore: 251 Identities = 112/142 (79%), Positives = 128/142 (90%), Gaps = 0/142 (0%) |
NCBI |
Show Blast
|
XP_001771732.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 2e-65 | Bitscore: 251 Identities = 114/142 (80%), Positives = 128/142 (90%), Gaps = 0/142 (0%) |
NCBI |
Show Blast
|
XP_002507532.1 |
mitosis protein DIM1/U5snRNP-specific component [Micromonas sp. RCC299]
Evalue: 3e-65 | Bitscore: 251 Identities = 112/142 (79%), Positives = 130/142 (92%), Gaps = 0/142 (0%) |
NCBI |
Show Blast
|
NP_001016646.1 |
thioredoxin-like 4A [Xenopus (Silurana) tropicalis]
Evalue: 3e-65 | Bitscore: 251 Identities = 113/142 (80%), Positives = 128/142 (90%), Gaps = 0/142 (0%) |
NCBI |
Show Blast
|
NP_001069528.1 |
thioredoxin-like protein 4A [Bos taurus]
Evalue: 4e-65 | Bitscore: 250 Identities = 112/142 (79%), Positives = 128/142 (90%), Gaps = 0/142 (0%) |
NCBI |
Show Blast
|
EFN51050.1 |
thioredoxin domain 2 [Chlorella variabilis]
Evalue: 4e-65 | Bitscore: 250 Identities = 115/142 (81%), Positives = 128/142 (90%), Gaps = 0/142 (0%) |
NCBI |
Show Blast
|
XP_002723903.1 |
PREDICTED: thioredoxin-like 4A [Oryctolagus cuniculus]
Evalue: 5e-65 | Bitscore: 250 Identities = 112/142 (79%), Positives = 127/142 (89%), Gaps = 0/142 (0%) |
NCBI |
Show Blast
|
No hits found against database Self with an e-value better than 1e-3. |
ProteinID | Description / BlastScore | Database | Actions |
P83877 |
Thioredoxin-like protein 4A OS=Mus musculus GN=Txnl4a PE=2 SV=1
Evalue: 6e-66 | Bitscore: 248 Identities = 112/142 (78%), Positives = 128/142 (90%) |
SwissP |
Show Blast
|
P83876 |
Thioredoxin-like protein 4A OS=Homo sapiens GN=TXNL4A PE=1 SV=1
Evalue: 6e-66 | Bitscore: 248 Identities = 112/142 (78%), Positives = 128/142 (90%) |
SwissP |
Show Blast
|
P87215 |
Mitosis protein dim1 OS=Schizosaccharomyces pombe GN=dim1 PE=1 SV=1
Evalue: 2e-61 | Bitscore: 233 Identities = 105/142 (73%), Positives = 126/142 (88%) |
SwissP |
Show Blast
|
Q75BD8 |
Spliceosomal protein DIB1 OS=Ashbya gossypii GN=DIB1 PE=3 SV=1
Evalue: 2e-50 | Bitscore: 197 Identities = 89/138 (64%), Positives = 111/138 (80%) |
SwissP |
Show Blast
|
Q06819 |
Spliceosomal protein DIB1 OS=Saccharomyces cerevisiae GN=DIB1 PE=1 SV=1
Evalue: 6e-49 | Bitscore: 192 Identities = 88/138 (63%), Positives = 110/138 (79%) |
SwissP |
Show Blast
|
Q553S5 |
Thioredoxin-like protein 4A homolog OS=Dictyostelium discoideum GN=txnl4a PE=3 SV=4
Evalue: 5e-47 | Bitscore: 186 Identities = 81/123 (65%), Positives = 105/123 (85%) |
SwissP |
Show Blast
|
Q6FMI2 |
Spliceosomal protein DIB1 OS=Candida glabrata GN=DIB1 PE=3 SV=1
Evalue: 2e-45 | Bitscore: 180 Identities = 83/136 (61%), Positives = 108/136 (79%) |
SwissP |
Show Blast
|
Q9NX01 |
Thioredoxin-like protein 4B OS=Homo sapiens GN=TXNL4B PE=1 SV=1
Evalue: 1e-25 | Bitscore: 114 Identities = 56/136 (41%), Positives = 89/136 (65%), Gaps = 2/136 (1%) |
SwissP |
Show Blast
|
Q8BUH1 |
Thioredoxin-like protein 4B OS=Mus musculus GN=Txnl4b PE=2 SV=1
Evalue: 5e-24 | Bitscore: 109 Identities = 56/143 (39%), Positives = 88/143 (61%), Gaps = 2/143 (1%) |
SwissP |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Alternative Models
- n/a
-
Protein
Associated ESTs/cDNAs
- n/a
-
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