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Bathycoccus prasinos


Gene ID
Bathy06g00410
Locus
Bathy06g00410
Functional Description
predicted protein
Gene Type
protein-coding gene
Contig
bathy_chrom_06
Last Modified On
12 July 2011 21h39
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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pico-PLAZA - lookup this gene in the PLAZA resource

Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
predicted protein
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

n/a
 

Protein Domains 


Domain IDDescriptionDatabase
IPR016124 Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich InterPro
IPR007681 Ran-interacting Mog1 protein InterPro
IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich InterPro
PTHR15837 FAMILY NOT NAMED HMMPanther

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
XP_002504159.1 predicted protein [Micromonas sp. RCC299]
Evalue: 2e-07 | Bitscore: 60
Identities = 32/89 (36%), Positives = 50/89 (56%), Gaps = 9/89 (10%)		 NCBI
Show Blast
XP_003060201.1 predicted protein [Micromonas pusilla CCMP1545]
Evalue: 5e-07 | Bitscore: 59
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 6/85 (7%)		 NCBI
Show Blast
XP_003065516.1 hypothetical protein CPC735_047410 [Coccidioides posadasii C735 delta SOWgp]
Evalue: 6e-05 | Bitscore: 52
Identities = 24/67 (36%), Positives = 41/67 (61%), Gaps = 1/67 (1%)		 NCBI
Show Blast
EFW13498.1 conserved hypothetical protein [Coccidioides posadasii str. Silveira]
Evalue: 6e-05 | Bitscore: 52
Identities = 24/67 (36%), Positives = 41/67 (61%), Gaps = 1/67 (1%)		 NCBI
Show Blast
XP_368377.1 hypothetical protein MGG_00867 [Magnaporthe oryzae 70-15]
Evalue: 0.0001 | Bitscore: 52
Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 2/55 (4%)		 NCBI
Show Blast
EFX03758.1 ran GTPase-binding protein mog1 [Grosmannia clavigera kw1407]
Evalue: 0.0002 | Bitscore: 50
Identities = 25/56 (45%), Positives = 35/56 (63%), Gaps = 2/56 (4%)		 NCBI
Show Blast
XP_001247976.1 hypothetical protein CIMG_01747 [Coccidioides immitis RS]
Evalue: 0.0003 | Bitscore: 50
Identities = 23/63 (37%), Positives = 39/63 (62%), Gaps = 1/63 (2%)		 NCBI
Show Blast
AAF36156.1 HSPC236 [Homo sapiens]
Evalue: 0.0004 | Bitscore: 50
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 14/90 (16%)		 NCBI
Show Blast
NP_001171273.1 ran guanine nucleotide release factor isoform C [Homo sapiens]
Evalue: 0.0005 | Bitscore: 49
Identities = 28/91 (31%), Positives = 46/91 (51%), Gaps = 14/91 (15%)		 NCBI
Show Blast
CAH18237.1 hypothetical protein [Homo sapiens]
Evalue: 0.0007 | Bitscore: 49
Identities = 28/91 (31%), Positives = 46/91 (51%), Gaps = 14/91 (15%)		 NCBI
Show Blast

Gene Structure 

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Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
-
Structure Quality
2

Alternative Models  

n/a
 

CDS  

Locus ID
Bathy06g00410
Redo Blast
CDS Length
909 nucleotides
CDS Sequence

Protein 

Locus ID
Bathy06g00410
Redo Blast
Protein Length
303 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

n/a