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Bathycoccus prasinos


Gene ID
Bathy05g01030
Locus
Bathy05g01030
Functional Description
glutathione S-transferase
Gene Type
protein-coding gene
Contig
bathy_chrom_05
Last Modified On
12 July 2011 21h39
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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pico-PLAZA - lookup this gene in the PLAZA resource

Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
glutathione S-transferase
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

n/a
 

Protein Domains 


Domain IDDescriptionDatabase
IPR012335 Thioredoxin fold InterPro
IPR010987 Glutathione S-transferase, C-terminal-like InterPro
IPR004046 Glutathione S-transferase, C-terminal InterPro
IPR017933 Glutathione S-transferase/chloride channel, C-terminal InterPro
PTHR11260 FAMILY NOT NAMED HMMPanther

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
BAJ90799.1 predicted protein [Hordeum vulgare subsp. vulgare]
Evalue: 1e-50 | Bitscore: 204
Identities = 115/313 (37%), Positives = 170/313 (54%), Gaps = 40/313 (13%)		 NCBI
Show Blast
XP_002453027.1 hypothetical protein SORBIDRAFT_04g036980 [Sorghum bicolor]
Evalue: 1e-47 | Bitscore: 194
Identities = 111/311 (36%), Positives = 169/311 (54%), Gaps = 42/311 (14%)		 NCBI
Show Blast
NP_001140698.1 hypothetical protein LOC100272773 [Zea mays]
Evalue: 2e-47 | Bitscore: 193
Identities = 111/311 (36%), Positives = 168/311 (54%), Gaps = 42/311 (14%)		 NCBI
Show Blast
ACG45833.1 glutathione transferase [Zea mays]
Evalue: 3e-47 | Bitscore: 193
Identities = 111/311 (36%), Positives = 168/311 (54%), Gaps = 42/311 (14%)		 NCBI
Show Blast
XP_002270355.1 PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 3e-47 | Bitscore: 193
Identities = 127/312 (41%), Positives = 168/312 (54%), Gaps = 31/312 (10%)		 NCBI
Show Blast
EAY87996.1 hypothetical protein OsI_09418 [Oryza sativa Indica Group]
Evalue: 8e-47 | Bitscore: 192
Identities = 110/313 (35%), Positives = 169/313 (54%), Gaps = 43/313 (14%)		 NCBI
Show Blast
ZP_06380816.1 glutathione S-transferase-like protein [Arthrospira platensis str. Paraca]
Evalue: 2e-46 | Bitscore: 191
Identities = 116/311 (37%), Positives = 162/311 (52%), Gaps = 43/311 (14%)		 NCBI
Show Blast
NP_001048496.1 Os02g0814800 [Oryza sativa Japonica Group]
Evalue: 7e-46 | Bitscore: 189
Identities = 109/313 (35%), Positives = 168/313 (54%), Gaps = 43/313 (14%)		 NCBI
Show Blast
XP_002970841.1 hypothetical protein SELMODRAFT_94435 [Selaginella moellendorffii]
Evalue: 1e-44 | Bitscore: 184
Identities = 117/313 (37%), Positives = 163/313 (52%), Gaps = 38/313 (12%)		 NCBI
Show Blast
XP_002969569.1 hypothetical protein SELMODRAFT_231328 [Selaginella moellendorffii]
Evalue: 1e-44 | Bitscore: 184
Identities = 117/313 (37%), Positives = 163/313 (52%), Gaps = 38/313 (12%)		 NCBI
Show Blast

Gene Structure 

View in GenomeView|View in Artemini


Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
-
Structure Quality
2

Alternative Models  

n/a
 

CDS  

Locus ID
Bathy05g01030
Redo Blast
CDS Length
1005 nucleotides
CDS Sequence

Protein 

Locus ID
Bathy05g01030
Redo Blast
Protein Length
335 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

n/a