- Gene ID
- Bathy04g04910
- Locus
- Bathy04g04910
- Functional Description
- phosphoadenosine phosphosulfate reductase
- Gene Type
- protein-coding gene
- Contig
- bathy_chrom_04
- Last Modified On
- 12 July 2011 21h39
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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pico-PLAZA - lookup this gene in the PLAZA resource |
Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- phosphoadenosine phosphosulfate reductase
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- n/a
-
Protein Domains
Domain ID | Description | Database |
IPR018247 |
EF-Hand 1, calcium-binding site |
InterPro |
IPR012335 |
Thioredoxin fold |
InterPro |
IPR011992 |
EF-hand-like domain |
InterPro |
IPR013766 |
Thioredoxin domain |
InterPro |
IPR014729 |
Rossmann-like alpha/beta/alpha sandwich fold |
InterPro |
IPR018249 |
EF-HAND 2 |
InterPro |
IPR002500 |
Phosphoadenosine phosphosulphate reductase |
InterPro |
IPR017936 |
Thioredoxin-like |
InterPro |
IPR012336 |
Thioredoxin-like fold |
InterPro |
PTHR23056 |
FAMILY NOT NAMED |
HMMPanther |
Protein Homologs
ProteinID | Description / BlastScore | Database | Actions |
XP_001422646.1 |
APS reductase [Ostreococcus lucimarinus CCE9901]
Evalue: 9e-151 | Bitscore: 538 Identities = 266/389 (68%), Positives = 310/389 (80%), Gaps = 13/389 (3%) |
NCBI |
Show Blast
|
XP_002505765.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 1e-144 | Bitscore: 518 Identities = 248/365 (68%), Positives = 292/365 (80%), Gaps = 6/365 (2%) |
NCBI |
Show Blast
|
XP_003082836.1 |
APS reductase (ISS) [Ostreococcus tauri]
Evalue: 2e-138 | Bitscore: 498 Identities = 240/363 (66%), Positives = 282/363 (78%), Gaps = 4/363 (1%) |
NCBI |
Show Blast
|
CAA04611.1 |
APS reductase [Brassica juncea]
Evalue: 5e-126 | Bitscore: 456 Identities = 220/395 (56%), Positives = 276/395 (70%), Gaps = 21/395 (5%) |
NCBI |
Show Blast
|
BAH57002.1 |
AT4G21990 [Arabidopsis thaliana]
Evalue: 2e-125 | Bitscore: 454 Identities = 213/363 (59%), Positives = 264/363 (73%), Gaps = 9/363 (2%) |
NCBI |
Show Blast
|
AAU03359.1 |
adenylyl-sulfate reductase [Solanum lycopersicum]
Evalue: 2e-125 | Bitscore: 454 Identities = 214/369 (58%), Positives = 269/369 (73%), Gaps = 10/369 (3%) |
NCBI |
Show Blast
|
NP_193930.1 |
APR3 (APS REDUCTASE 3); adenylyl-sulfate reductase [Arabidopsis thaliana]
Evalue: 8e-125 | Bitscore: 452 Identities = 212/363 (58%), Positives = 264/363 (73%), Gaps = 9/363 (2%) |
NCBI |
Show Blast
|
AAM65133.1 |
PRH26 protein [Arabidopsis thaliana]
Evalue: 8e-125 | Bitscore: 452 Identities = 212/366 (58%), Positives = 265/366 (72%), Gaps = 9/366 (2%) |
NCBI |
Show Blast
|
XP_002867800.1 |
PRH26 protein [Arabidopsis lyrata subsp. lyrata]
Evalue: 2e-124 | Bitscore: 451 Identities = 212/362 (59%), Positives = 263/362 (73%), Gaps = 9/362 (2%) |
NCBI |
Show Blast
|
P92980 |
5'-adenylylsulfate reductase 3, chloroplastic OS=Arabidopsis thaliana GN=APR3 PE=2 SV=2
Evalue: 1e-125 | Bitscore: 449 Identities = 215/378 (56%), Positives = 269/378 (71%), Gaps = 11/378 (2%) |
SwissP |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
XP_001422646.1 |
APS reductase [Ostreococcus lucimarinus CCE9901]
Evalue: 9e-151 | Bitscore: 538 Identities = 266/389 (68%), Positives = 310/389 (80%), Gaps = 13/389 (3%) |
NCBI |
Show Blast
|
XP_002505765.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 1e-144 | Bitscore: 518 Identities = 248/365 (68%), Positives = 292/365 (80%), Gaps = 6/365 (2%) |
NCBI |
Show Blast
|
XP_003082836.1 |
APS reductase (ISS) [Ostreococcus tauri]
Evalue: 2e-138 | Bitscore: 498 Identities = 240/363 (66%), Positives = 282/363 (78%), Gaps = 4/363 (1%) |
NCBI |
Show Blast
|
CAA04611.1 |
APS reductase [Brassica juncea]
Evalue: 5e-126 | Bitscore: 456 Identities = 220/395 (56%), Positives = 276/395 (70%), Gaps = 21/395 (5%) |
NCBI |
Show Blast
|
BAH57002.1 |
AT4G21990 [Arabidopsis thaliana]
Evalue: 2e-125 | Bitscore: 454 Identities = 213/363 (59%), Positives = 264/363 (73%), Gaps = 9/363 (2%) |
NCBI |
Show Blast
|
AAU03359.1 |
adenylyl-sulfate reductase [Solanum lycopersicum]
Evalue: 2e-125 | Bitscore: 454 Identities = 214/369 (58%), Positives = 269/369 (73%), Gaps = 10/369 (3%) |
NCBI |
Show Blast
|
NP_193930.1 |
APR3 (APS REDUCTASE 3); adenylyl-sulfate reductase [Arabidopsis thaliana]
Evalue: 8e-125 | Bitscore: 452 Identities = 212/363 (58%), Positives = 264/363 (73%), Gaps = 9/363 (2%) |
NCBI |
Show Blast
|
AAM65133.1 |
PRH26 protein [Arabidopsis thaliana]
Evalue: 8e-125 | Bitscore: 452 Identities = 212/366 (58%), Positives = 265/366 (72%), Gaps = 9/366 (2%) |
NCBI |
Show Blast
|
XP_002867800.1 |
PRH26 protein [Arabidopsis lyrata subsp. lyrata]
Evalue: 2e-124 | Bitscore: 451 Identities = 212/362 (59%), Positives = 263/362 (73%), Gaps = 9/362 (2%) |
NCBI |
Show Blast
|
AAC49562.1 |
PRH26 [Arabidopsis thaliana]
Evalue: 5e-124 | Bitscore: 449 Identities = 211/366 (58%), Positives = 264/366 (72%), Gaps = 9/366 (2%) |
NCBI |
Show Blast
|
No hits found against database Self with an e-value better than 1e-3. |
ProteinID | Description / BlastScore | Database | Actions |
P92980 |
5'-adenylylsulfate reductase 3, chloroplastic OS=Arabidopsis thaliana GN=APR3 PE=2 SV=2
Evalue: 1e-125 | Bitscore: 449 Identities = 215/378 (56%), Positives = 269/378 (71%), Gaps = 11/378 (2%) |
SwissP |
Show Blast
|
P92979 |
5'-adenylylsulfate reductase 1, chloroplastic OS=Arabidopsis thaliana GN=APR1 PE=1 SV=2
Evalue: 1e-123 | Bitscore: 443 Identities = 207/362 (57%), Positives = 260/362 (71%), Gaps = 8/362 (2%) |
SwissP |
Show Blast
|
P92981 |
5'-adenylylsulfate reductase 2, chloroplastic OS=Arabidopsis thaliana GN=APR2 PE=1 SV=2
Evalue: 1e-122 | Bitscore: 440 Identities = 211/364 (57%), Positives = 257/364 (70%), Gaps = 15/364 (4%) |
SwissP |
Show Blast
|
Q6Z4A7 |
Probable 5'-adenylylsulfate reductase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=APR1 PE=2 SV=1
Evalue: 1e-120 | Bitscore: 433 Identities = 211/373 (56%), Positives = 260/373 (69%), Gaps = 14/373 (3%) |
SwissP |
Show Blast
|
B7VBC3 |
Phosphoadenosine phosphosulfate reductase OS=Pseudomonas aeruginosa (strain LESB58) GN=cysH PE=3 SV=1
Evalue: 6e-78 | Bitscore: 292 Identities = 128/225 (56%), Positives = 167/225 (74%), Gaps = 2/225 (0%) |
SwissP |
Show Blast
|
Q02KP7 |
Phosphoadenosine phosphosulfate reductase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=cysH PE=3 SV=1
Evalue: 6e-78 | Bitscore: 292 Identities = 128/225 (56%), Positives = 167/225 (74%), Gaps = 2/225 (0%) |
SwissP |
Show Blast
|
Q9JUD5 |
Phosphoadenosine phosphosulfate reductase OS=Neisseria meningitidis serogroup A GN=cysH PE=3 SV=1
Evalue: 5e-40 | Bitscore: 166 Identities = 87/237 (36%), Positives = 135/237 (56%), Gaps = 11/237 (4%) |
SwissP |
Show Blast
|
Q9JRT1 |
Phosphoadenosine phosphosulfate reductase OS=Neisseria meningitidis serogroup B GN=cysH1 PE=3 SV=1
Evalue: 2e-39 | Bitscore: 164 Identities = 84/230 (36%), Positives = 132/230 (57%), Gaps = 11/230 (4%) |
SwissP |
Show Blast
|
O33579 |
Phosphoadenosine phosphosulfate reductase (Fragment) OS=Rhizobium tropici GN=cysH PE=3 SV=1
Evalue: 2e-37 | Bitscore: 157 Identities = 75/179 (41%), Positives = 102/179 (56%), Gaps = 10/179 (5%) |
SwissP |
Show Blast
|
Q8UH67 |
Phosphoadenosine phosphosulfate reductase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=cysH PE=3 SV=1
Evalue: 1e-36 | Bitscore: 155 Identities = 79/201 (39%), Positives = 109/201 (54%), Gaps = 10/201 (4%) |
SwissP |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Alternative Models
- n/a
-
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
EST ID | SuperContig_3.clus217.Contig1 |
Support Model | N |
More Info |
Comment | EST is inconsistent with the given gene model. |
Mapping Location | 994775..995460 |
Strand - |
EST ID | SuperContig_3.clus473.Contig1 |
Support Model | Y |
More Info |
Comment | EST is non-spliced and has no reliable strand information |
Mapping Location | 995765..996230 |
Strand + |
|