Bathycoccus prasinos

Home

Contact:
Bioinformatics Gent
Principal Investigator:

ORCAE Technical Support:

Navigation

Blast Search

Annotator
Gene Actions
Linkout
Gene Function
Gene Ontology
Protein Domains
Protein Homologs
Gene Structure
Alt Models
Cds
Protein
Est Cdna

Bathycoccus prasinos

Gene ID: Bathy04g04230
Locus: Bathy04g04230
Functional Description: unknown protein
Gene Type: protein-coding gene
Contig: bathy_chrom_04
Last Modified On: 12 July 2011 21h39
History

Annotator
Top

Name: EuGene Automatic Prediction
Email: beg-orcae@psb.ugent.be
Lab: UGent
Status: active

Gene Actions
Top

Sorry, only history comparison allowed for non logged in users!!

Compare this version with :
Go!

Link Out
Top

pico-PLAZA - lookup this gene in the PLAZA resource

Gene Function
Top

Short Name: n/a
Alternative Names: n/a
Definition: unknown protein
Additional Functional Description: n/a
Pubmed ID: n/a
EC Number: n/a
KOGid: n/a

Gene Ontology
Top

n/a

Protein Domains
Top

Domain ID	Description	Database
IPR018247	EF-Hand 1, calcium-binding site	InterPro
IPR018249	EF-HAND 2	InterPro

Protein Homologs
Top

n/a

Gene Structure
Top

View in GenomeView|View in Artemini

Download gene in EMBL format

Structure: ;837356..840256;
Sequence Type: mRNA
Strand: +
Structure Quality: 2

Alternative Models
Top

n/a

CDS
Top

Locus ID: Bathy04g04230
: Redo Blast
CDS Length: 2901 nucleotides
CDS Sequence: ATGAACCAGCGAACCGGCGCGAACGAAAGAACGAAAAGCTTCTCCGTGGCGCCGAAGATGAACGCGCGATGGCACGTCGGCCCGGCGTTCGATCCGCACGAAGAAGAACTTGCGGAGGAAAAGAAGAAGAGGAATGCGACGAATGCGAATACGAGTTTCCCCGGTGGAAGCGGAGGAAACGAAGCACCGATTAAATCGGACGGATTAGAGCGCGAGGAGATGCACGCGTGGTCTGATCTGTCGAAACTGTTCAAGACGTTCGCGGCGATATGTTTCGTGCTGTTGGTGTTGCCGACGTTGTTCGGGTCGACGCCGCATAAAAACGCGGCGAGGAAAGTTGGGAGAGCGAGCGTGAGAGCGTCGAGGTACGTTTCGAAACCGTTTAGTAAGAAGAGGTCGTATTCGTTTCCCGCGCACGACGGCTACGACGAAACGTTGGACGACGCGTACTCCAATCCGAGAGAGTACGATAACGCGATTAAAGAGTACGAGGACGCGAAGAGCGCTTTTGATAAGTTGGACGAGCAGTTAGGAGAAGGGTCCATCGATGAGGTGTTGTCCGAAGACGTGAGGCAGAAATACGAGGAGGCTTTGTTTAACAAGCAAGCGGCGGAGCTGAAAAGAGATTTCGAGGATTCCATGGAGAAGAAGAAGAAAGAATGGACCGGGACAATGAAAGGTGCGAGTTGCGCGGATAAGACGAGACACTTATTGGAATCGTACGTGGAACATTACTCGTGCAGATTTGACGCAAAGTACGGATCGTTATCGCCGATGATGAACTTTCCCGTCGTGAGAGAGGATTACGAAAACGCAGGCGAGAGGGAGACGAGAGCGTTGGCGACGTCGACGAGCGTCGCGGATGCAATCAAGTGGTCGGCCGAGTTATCCGACGACGAAAAAGATTCAGACATGAAGAAACAAATGAGCGCGGGTGGACTTGCCGTGAGCACATGGTTGAGATTTTATAGCGAAAAGAAGAAAGAGGTGCTCGGATTGAGAGACGACGGAACGTTGACGTGGGACGTGTTGACGAAGGAAACGAGACGATACCAACCCATAGAGAGGTACAATCCACCACCAGCGCCGGCTCCAGCACCGAGAAAAGCTGCTCATGTACCGGCCCCAGTTCCGAGACAAGCCGCGTATGGTATAGACGTTGCCGTCGTGAATGAAGGCGCGTTTGCAAAGATGGATACGGACGGGGACGGGAGCATTTCCGTGGACGAAGTTACGAACGCCGCGTTGAAAGGTGAGGTTGATTTGAAAGATGGCGTCGTTGAAGAAATCGTTCAATCGAAAAGTTATAAAAATGCGGCTTTATCTGCAGAAGAACTGGCAATGTTAGATGCGGAAATGAAAGCGGACGTCGCGCCGAAGAAGAGCATGTTTTCAAACTTGTTCGGGAGAAGAAAGTTGCTCAAGAAAAAGAATAAAGACGATGGTGGTGGTGGTGGTGGAGGAGGAAACTGGGGCGCGAATCCGAGCGAGTATAGATCACCGTTTGACGCGGAAGCGCCGTCTGCATCGTCTTCCGAGACTGAATACGACCAACAAACGGTGGATCCTCTGTATTTCACAGTGAATGTCTTTGCGAATAACTTCCCTGAAAACGTCGCCACGGTCGCCAAAGAATCGGCGACGCTCATGCGTGCGCTTCGCTTACCCGGCGTAGCGAGAGTCTTTTCCGGCAACCCGTTCAAAATGCGCGACGCGAGTCGAATTACCGATGAATACTCCGAGCAAGGTTCGGGCTACTTCTCGTCGCCGGGAGGCATGATTTCGTTCGCCACGGCAAAACTCTCCGCGAATGGTGGTAACGGTTTTGTCAACGCCGAATTGCGAAGCGAGTGCGAACTTGCCAATCGATGCGGCTCGCGATGGGCATCCACCCCTATTTCCACGAACGAAGGTAAAACGGAGTACCAAACCGTCCCGGATTACGCCGGAGGCGGCAAGTTGCCGGACGTAGTTTCCGTTCCTTCTATTTCCTACAAGAAAGCTTTAGAAGGTGGATACCCGTTGTTATCGATCGTGGAAGACTCTGACAAAGATACCTTTATCCAAGCCGCGGACGAAGCGTTGAATGATCGCGCGGTACCCGCGGTGCTCTTTTCCAACGTCAAAACGAACACGTGGCAGTTTGTGGAAGACTTGAAGAAACGCTACAAGAGCGGGTACAACATTTTTGCCGTCGCTCCAGGTCACGAGCACAACCCGAGACGACCGGTATTTCTACCCTTGGACGATCACGCGTTAGCTTGGACGTTTTTCAACGAATACTATCCAACTGAAACATCCGTGGGTGGTACTGCCATCGCGTTGATCGTCCGAGACGACGTCTCGAATTTAGGCTTCAACGACTGGCTCGCGGAGAACAAAATCGTCGCTTGCGACTGTAACTTGGGCACGTGCGCCGCCGCTACTGGCGTAAAATACGAAGAGGTGAAATATACCATCGAAAGCTACAAGCCACAGAAATCGTCGTGGGAGGAAGCGACGAAAACGCATCAAGCGAAAACCGCGGAATGGAACAACTACGATCGCCTCGCGCAGCGCTTGAAAGAGTCGCAAACGGTGGATTTCCAAGAGCAATTGGAAGCGGACCAAAAAGCCTTGACGGCGAAAAAAGAGCTCGAACAAGCCGAGAGAGAGTTGAAAGCGGCGAATGCGGCCATGAGCGCGGCGAAGAAATCAGCCGCGGAGAAGAAACGGTCGATTTGGAACGACGGGTGGGGTGACTTTGACGGCTTTCGACGACGAAATTTGTTGAAGAAGAAAAATAAAAAGAATAGAGGAGACGGCGGAGGAGCGGTAGCGGCAAGAAATACGTTCGAAACGCCACCGGCGTATTGCGACATAGACGATTACATCGATAACGAGGACGACGTTTGGGCGTAA

Protein
Top

Locus ID: Bathy04g04230
: Redo Blast
Protein Length: 967 aminoacids
Protein Sequence: MNQRTGANERTKSFSVAPKMNARWHVGPAFDPHEEELAEEKKKRNATNANTSFPGGSGGNEAPIKSDGLEREEMHAWSDLSKLFKTFAAICFVLLVLPTLFGSTPHKNAARKVGRASVRASRYVSKPFSKKRSYSFPAHDGYDETLDDAYSNPREYDNAIKEYEDAKSAFDKLDEQLGEGSIDEVLSEDVRQKYEEALFNKQAAELKRDFEDSMEKKKKEWTGTMKGASCADKTRHLLESYVEHYSCRFDAKYGSLSPMMNFPVVREDYENAGERETRALATSTSVADAIKWSAELSDDEKDSDMKKQMSAGGLAVSTWLRFYSEKKKEVLGLRDDGTLTWDVLTKETRRYQPIERYNPPPAPAPAPRKAAHVPAPVPRQAAYGIDVAVVNEGAFAKMDTDGDGSISVDEVTNAALKGEVDLKDGVVEEIVQSKSYKNAALSAEELAMLDAEMKADVAPKKSMFSNLFGRRKLLKKKNKDDGGGGGGGGNWGANPSEYRSPFDAEAPSASSSETEYDQQTVDPLYFTVNVFANNFPENVATVAKESATLMRALRLPGVARVFSGNPFKMRDASRITDEYSEQGSGYFSSPGGMISFATAKLSANGGNGFVNAELRSECELANRCGSRWASTPISTNEGKTEYQTVPDYAGGGKLPDVVSVPSISYKKALEGGYPLLSIVEDSDKDTFIQAADEALNDRAVPAVLFSNVKTNTWQFVEDLKKRYKSGYNIFAVAPGHEHNPRRPVFLPLDDHALAWTFFNEYYPTETSVGGTAIALIVRDDVSNLGFNDWLAENKIVACDCNLGTCAAATGVKYEEVKYTIESYKPQKSSWEEATKTHQAKTAEWNNYDRLAQRLKESQTVDFQEQLEADQKALTAKKELEQAERELKAANAAMSAAKKSAAEKKRSIWNDGWGDFDGFRRRNLLKKKNKKNRGDGGGAVAARNTFETPPAYCDIDDYIDNEDDVWA*
Signal Peptide: n/a
Subcellular Localisation: n/a

Associated ESTs/cDNAs
Top

View in GenomeView|View in Artemini

EST ID	SuperContig_3.clus252.Contig1	Support Model	Y	More Info
Comment	EST is non-spliced and has no reliable strand information
Mapping Location	837611..838039		Strand -

Annotator Top

Gene Actions Top

Link Out Top

Gene Function Top

Gene Ontology Top

Protein Domains Top

Protein Homologs Top

Gene Structure Top

Alternative Models Top

CDS Top

Protein Top

Associated ESTs/cDNAs Top