- Gene ID
- Bathy03g05460
- Locus
- Bathy03g05460
- Functional Description
- thioredoxin
- Gene Type
- protein-coding gene
- Contig
- bathy_chrom_03
- Last Modified On
- 12 July 2011 21h39
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- thioredoxin
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
n/a
- Biological Process
-
1.
cell redox homeostasis
Protein Domains
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| XP_002501002.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 2e-20 | Bitscore: 102
Identities = 45/103 (44%), Positives = 67/103 (65%), Gaps = 1/103 (1%) |
NCBI |
Show Blast
|
| XP_003079587.1 |
thioredoxin family protein (ISS) [Ostreococcus tauri]
Evalue: 2e-16 | Bitscore: 89
Identities = 44/104 (42%), Positives = 64/104 (62%), Gaps = 4/104 (4%) |
NCBI |
Show Blast
|
| XP_002979140.1 |
hypothetical protein SELMODRAFT_110563 [Selaginella moellendorffii]
Evalue: 3e-16 | Bitscore: 88
Identities = 43/105 (41%), Positives = 62/105 (59%), Gaps = 1/105 (1%) |
NCBI |
Show Blast
|
| XP_001418111.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 5e-16 | Bitscore: 87
Identities = 41/79 (52%), Positives = 53/79 (67%), Gaps = 1/79 (1%) |
NCBI |
Show Blast
|
| XP_002446930.1 |
hypothetical protein SORBIDRAFT_06g025180 [Sorghum bicolor]
Evalue: 2e-14 | Bitscore: 82
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 1/105 (1%) |
NCBI |
Show Blast
|
| NP_566982.1 |
thioredoxin family protein [Arabidopsis thaliana] sp|Q8LCH9.1|TRL33_ARATH RecName: Full=Thioredoxin-like 3-3
Evalue: 2e-14 | Bitscore: 82
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 1/105 (1%) |
NCBI |
Show Blast
|
| XP_002876194.1 |
thioredoxin family protein [Arabidopsis lyrata subsp. lyrata]
Evalue: 2e-14 | Bitscore: 82
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 1/105 (1%) |
NCBI |
Show Blast
|
| XP_002519481.1 |
Thioredoxin, putative [Ricinus communis]
Evalue: 4e-14 | Bitscore: 81
Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 1/105 (1%) |
NCBI |
Show Blast
|
| XP_003056870.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 4e-14 | Bitscore: 81
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 0/75 (0%) |
NCBI |
Show Blast
|
| NP_001053544.2 |
Os04g0560200 [Oryza sativa Japonica Group] sp|Q7XSQ7.2|TRL33_ORYSJ RecName: Full=Thioredoxin-like 3-3; AltName: Full=Thioredoxin-like
Evalue: 8e-14 | Bitscore: 80
Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 1/105 (1%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| XP_002501002.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 2e-20 | Bitscore: 102
Identities = 45/103 (44%), Positives = 67/103 (65%), Gaps = 1/103 (1%) |
NCBI |
Show Blast
|
| XP_003079587.1 |
thioredoxin family protein (ISS) [Ostreococcus tauri]
Evalue: 2e-16 | Bitscore: 89
Identities = 44/104 (42%), Positives = 64/104 (62%), Gaps = 4/104 (4%) |
NCBI |
Show Blast
|
| XP_002979140.1 |
hypothetical protein SELMODRAFT_110563 [Selaginella moellendorffii]
Evalue: 3e-16 | Bitscore: 88
Identities = 43/105 (41%), Positives = 62/105 (59%), Gaps = 1/105 (1%) |
NCBI |
Show Blast
|
| XP_001418111.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 5e-16 | Bitscore: 87
Identities = 41/79 (52%), Positives = 53/79 (67%), Gaps = 1/79 (1%) |
NCBI |
Show Blast
|
| XP_002446930.1 |
hypothetical protein SORBIDRAFT_06g025180 [Sorghum bicolor]
Evalue: 2e-14 | Bitscore: 82
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 1/105 (1%) |
NCBI |
Show Blast
|
| NP_566982.1 |
thioredoxin family protein [Arabidopsis thaliana] sp|Q8LCH9.1|TRL33_ARATH RecName: Full=Thioredoxin-like 3-3
Evalue: 2e-14 | Bitscore: 82
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 1/105 (1%) |
NCBI |
Show Blast
|
| XP_002876194.1 |
thioredoxin family protein [Arabidopsis lyrata subsp. lyrata]
Evalue: 2e-14 | Bitscore: 82
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 1/105 (1%) |
NCBI |
Show Blast
|
| XP_002519481.1 |
Thioredoxin, putative [Ricinus communis]
Evalue: 4e-14 | Bitscore: 81
Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 1/105 (1%) |
NCBI |
Show Blast
|
| XP_003056870.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 4e-14 | Bitscore: 81
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 0/75 (0%) |
NCBI |
Show Blast
|
| NP_001053544.2 |
Os04g0560200 [Oryza sativa Japonica Group] sp|Q7XSQ7.2|TRL33_ORYSJ RecName: Full=Thioredoxin-like 3-3; AltName: Full=Thioredoxin-like
Evalue: 8e-14 | Bitscore: 80
Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 1/105 (1%) |
NCBI |
Show Blast
|
| No hits found against database Self with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q8LCH9 |
Thioredoxin-like 3-3 OS=Arabidopsis thaliana GN=At3g53220 PE=2 SV=1
Evalue: 8e-15 | Bitscore: 79
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 1/105 (0%) |
SwissP |
Show Blast
|
| Q7XSQ7 |
Thioredoxin-like 3-3 OS=Oryza sativa subsp. japonica GN=Os04g0560200 PE=2 SV=2
Evalue: 2e-14 | Bitscore: 78
Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 1/105 (0%) |
SwissP |
Show Blast
|
| Q9LXZ8 |
Putative thioredoxin H10 OS=Arabidopsis thaliana GN=At3g56420 PE=3 SV=2
Evalue: 2e-07 | Bitscore: 54
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 7/103 (6%) |
SwissP |
Show Blast
|
| Q0DKF1 |
Thioredoxin H4-2 OS=Oryza sativa subsp. japonica GN=Os05g0169000 PE=2 SV=1
Evalue: 3e-07 | Bitscore: 54
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 3/108 (2%) |
SwissP |
Show Blast
|
| Q9AS75 |
Thioredoxin H4-1 OS=Oryza sativa subsp. japonica GN=Os01g0168200 PE=2 SV=1
Evalue: 3e-07 | Bitscore: 54
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 3/108 (2%) |
SwissP |
Show Blast
|
| Q38879 |
Thioredoxin H2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2
Evalue: 3e-07 | Bitscore: 53
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 2/84 (2%) |
SwissP |
Show Blast
|
| Q9DGI3 |
Thioredoxin OS=Ictalurus punctatus GN=txn PE=3 SV=1
Evalue: 3e-07 | Bitscore: 53
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 4/85 (4%) |
SwissP |
Show Blast
|
| O97508 |
Thioredoxin OS=Equus caballus GN=TXN PE=3 SV=3
Evalue: 6e-07 | Bitscore: 53
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 3/98 (3%) |
SwissP |
Show Blast
|
| Q1ZXE0 |
Putative thioredoxin-4 OS=Dictyostelium discoideum GN=trxD PE=3 SV=2
Evalue: 1e-06 | Bitscore: 52
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 5/94 (5%) |
SwissP |
Show Blast
|
| P10639 |
Thioredoxin OS=Mus musculus GN=Txn PE=1 SV=3
Evalue: 1e-06 | Bitscore: 52
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 3/101 (2%) |
SwissP |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Alternative Models
- n/a
-
Protein
Associated ESTs/cDNAs
- n/a
-
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