- Gene ID
- Bathy03g05430
- Locus
- Bathy03g05430
- Functional Description
- predicted protein
- Gene Type
- protein-coding gene
- Contig
- bathy_chrom_03
- Last Modified On
- 12 July 2011 21h39
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
Sorry, only history comparison allowed for non logged in users!! |
Compare this version with : Go! |
Link Out
pico-PLAZA - lookup this gene in the PLAZA resource |
Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- predicted protein
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- n/a
-
Protein Domains
Domain ID | Description | Database |
PTHR10984 |
ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN |
HMMPanther |
IPR012335 |
Thioredoxin fold |
InterPro |
IPR017936 |
Thioredoxin-like |
InterPro |
IPR013766 |
Thioredoxin domain |
InterPro |
IPR012936 |
Domain of unknown function DUF1692 |
InterPro |
Protein Homologs
ProteinID | Description / BlastScore | Database | Actions |
XP_001418112.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 2e-85 | Bitscore: 322 Identities = 206/597 (35%), Positives = 302/597 (51%), Gaps = 97/597 (16%) |
NCBI |
Show Blast
|
XP_003056869.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 3e-82 | Bitscore: 310 Identities = 209/651 (32%), Positives = 318/651 (49%), Gaps = 115/651 (18%) |
NCBI |
Show Blast
|
XP_003079589.1 |
acyl-CoA thioester hydrolase-like (ISS) [Ostreococcus tauri]
Evalue: 3e-77 | Bitscore: 294 Identities = 207/649 (32%), Positives = 311/649 (48%), Gaps = 107/649 (16%) |
NCBI |
Show Blast
|
XP_002501003.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 1e-43 | Bitscore: 182 Identities = 112/307 (36%), Positives = 156/307 (51%), Gaps = 56/307 (18%) |
NCBI |
Show Blast
|
XP_003058982.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 5e-36 | Bitscore: 157 Identities = 152/615 (25%), Positives = 249/615 (40%), Gaps = 150/615 (24%) |
NCBI |
Show Blast
|
NP_567765.2 |
thioredoxin family protein [Arabidopsis thaliana] sp|Q9T042.1|PDI54_ARATH RecName: Full=Protein disulfide-isomerase 5-4; Short=AtPDIL5-4;
Evalue: 5e-33 | Bitscore: 147 Identities = 151/621 (24%), Positives = 247/621 (40%), Gaps = 170/621 (27%) |
NCBI |
Show Blast
|
NP_680742.2 |
thioredoxin family protein [Arabidopsis thaliana]
Evalue: 7e-32 | Bitscore: 143 Identities = 147/600 (25%), Positives = 237/600 (40%), Gaps = 167/600 (28%) |
NCBI |
Show Blast
|
XP_002281649.1 |
PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 1e-31 | Bitscore: 143 Identities = 148/626 (24%), Positives = 256/626 (41%), Gaps = 166/626 (27%) |
NCBI |
Show Blast
|
Q9T042 |
Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana GN=PDIL5-4 PE=2 SV=1
Evalue: 6e-33 | Bitscore: 142 Identities = 149/621 (23%), Positives = 243/621 (39%), Gaps = 170/621 (27%) |
SwissP |
Show Blast
|
XP_002522864.1 |
thioredoxin domain-containing protein, putative [Ricinus communis]
Evalue: 4e-31 | Bitscore: 141 Identities = 149/618 (24%), Positives = 250/618 (40%), Gaps = 164/618 (27%) |
NCBI |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
XP_001418112.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 2e-85 | Bitscore: 322 Identities = 206/597 (35%), Positives = 302/597 (51%), Gaps = 97/597 (16%) |
NCBI |
Show Blast
|
XP_003056869.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 3e-82 | Bitscore: 310 Identities = 209/651 (32%), Positives = 318/651 (49%), Gaps = 115/651 (18%) |
NCBI |
Show Blast
|
XP_003079589.1 |
acyl-CoA thioester hydrolase-like (ISS) [Ostreococcus tauri]
Evalue: 3e-77 | Bitscore: 294 Identities = 207/649 (32%), Positives = 311/649 (48%), Gaps = 107/649 (16%) |
NCBI |
Show Blast
|
XP_002501003.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 1e-43 | Bitscore: 182 Identities = 112/307 (36%), Positives = 156/307 (51%), Gaps = 56/307 (18%) |
NCBI |
Show Blast
|
XP_003058982.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 5e-36 | Bitscore: 157 Identities = 152/615 (25%), Positives = 249/615 (40%), Gaps = 150/615 (24%) |
NCBI |
Show Blast
|
NP_567765.2 |
thioredoxin family protein [Arabidopsis thaliana] sp|Q9T042.1|PDI54_ARATH RecName: Full=Protein disulfide-isomerase 5-4; Short=AtPDIL5-4;
Evalue: 5e-33 | Bitscore: 147 Identities = 151/621 (24%), Positives = 247/621 (40%), Gaps = 170/621 (27%) |
NCBI |
Show Blast
|
NP_680742.2 |
thioredoxin family protein [Arabidopsis thaliana]
Evalue: 7e-32 | Bitscore: 143 Identities = 147/600 (25%), Positives = 237/600 (40%), Gaps = 167/600 (28%) |
NCBI |
Show Blast
|
XP_002281649.1 |
PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 1e-31 | Bitscore: 143 Identities = 148/626 (24%), Positives = 256/626 (41%), Gaps = 166/626 (27%) |
NCBI |
Show Blast
|
XP_002522864.1 |
thioredoxin domain-containing protein, putative [Ricinus communis]
Evalue: 4e-31 | Bitscore: 141 Identities = 149/618 (24%), Positives = 250/618 (40%), Gaps = 164/618 (27%) |
NCBI |
Show Blast
|
XP_002317580.1 |
predicted protein [Populus trichocarpa]
Evalue: 2e-30 | Bitscore: 138 Identities = 149/621 (24%), Positives = 254/621 (41%), Gaps = 154/621 (25%) |
NCBI |
Show Blast
|
No hits found against database Self with an e-value better than 1e-3. |
ProteinID | Description / BlastScore | Database | Actions |
Q9T042 |
Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana GN=PDIL5-4 PE=2 SV=1
Evalue: 6e-33 | Bitscore: 142 Identities = 149/621 (23%), Positives = 243/621 (39%), Gaps = 170/621 (27%) |
SwissP |
Show Blast
|
Q69SA9 |
Protein disulfide isomerase-like 5-4 OS=Oryza sativa subsp. japonica GN=PDIL5-4 PE=2 SV=1
Evalue: 1e-30 | Bitscore: 135 Identities = 153/612 (25%), Positives = 254/612 (41%), Gaps = 145/612 (23%) |
SwissP |
Show Blast
|
P52589 |
Protein disulfide-isomerase OS=Triticum aestivum GN=PDI PE=2 SV=1
Evalue: 2e-13 | Bitscore: 77 Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 20/123 (16%) |
SwissP |
Show Blast
|
P80284 |
Protein disulfide-isomerase OS=Hordeum vulgare GN=PDI PE=1 SV=2
Evalue: 2e-13 | Bitscore: 77 Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 20/123 (16%) |
SwissP |
Show Blast
|
Q7XRB5 |
Protein disulfide isomerase-like 1-2 OS=Oryza sativa subsp. japonica GN=PDIL1-2 PE=2 SV=2
Evalue: 2e-13 | Bitscore: 77 Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 20/123 (16%) |
SwissP |
Show Blast
|
P29828 |
Protein disulfide-isomerase OS=Medicago sativa GN=PDI PE=2 SV=1
Evalue: 4e-13 | Bitscore: 77 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 20/127 (15%) |
SwissP |
Show Blast
|
Q54EN4 |
Protein disulfide-isomerase 2 OS=Dictyostelium discoideum GN=pdi2 PE=3 SV=1
Evalue: 2e-12 | Bitscore: 75 Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 25/124 (20%) |
SwissP |
Show Blast
|
Q12730 |
Protein disulfide-isomerase OS=Aspergillus niger GN=pdiA PE=2 SV=1
Evalue: 3e-12 | Bitscore: 74 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 25/123 (20%) |
SwissP |
Show Blast
|
Q9SRG3 |
Protein disulfide isomerase-like 1-2 OS=Arabidopsis thaliana GN=PDIL1-2 PE=1 SV=1
Evalue: 5e-12 | Bitscore: 73 Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 20/127 (15%) |
SwissP |
Show Blast
|
P17967 |
Protein disulfide-isomerase OS=Saccharomyces cerevisiae GN=PDI1 PE=1 SV=2
Evalue: 7e-12 | Bitscore: 73 Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 25/124 (20%) |
SwissP |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Alternative Models
- n/a
-
Protein
Associated ESTs/cDNAs
- n/a
-
|