- Gene ID
- Bathy03g04190
- Locus
- Bathy03g04190
- Functional Description
- predicted protein
- Gene Type
- protein-coding gene
- Contig
- bathy_chrom_03
- Last Modified On
- 12 July 2011 21h39
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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pico-PLAZA - lookup this gene in the PLAZA resource |
Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- predicted protein
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- n/a
-
Protein Domains
Domain ID | Description | Database |
IPR014729 |
Rossmann-like alpha/beta/alpha sandwich fold |
InterPro |
IPR003848 |
Domain of unknown function DUF218 |
InterPro |
Protein Homologs
ProteinID | Description / BlastScore | Database | Actions |
XP_002508760.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 4e-60 | Bitscore: 236 Identities = 118/234 (50%), Positives = 154/234 (66%), Gaps = 20/234 (9%) |
NCBI |
Show Blast
|
XP_001417809.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 6e-54 | Bitscore: 215 Identities = 125/219 (57%), Positives = 150/219 (68%), Gaps = 8/219 (4%) |
NCBI |
Show Blast
|
XP_003079443.1 |
unnamed protein product [Ostreococcus tauri]
Evalue: 5e-53 | Bitscore: 212 Identities = 122/217 (56%), Positives = 143/217 (66%), Gaps = 6/217 (3%) |
NCBI |
Show Blast
|
XP_001699147.1 |
hypothetical protein CHLREDRAFT_185300 [Chlamydomonas reinhardtii]
Evalue: 6e-32 | Bitscore: 142 Identities = 84/213 (39%), Positives = 116/213 (54%), Gaps = 7/213 (3%) |
NCBI |
Show Blast
|
XP_001757921.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 3e-31 | Bitscore: 140 Identities = 84/229 (37%), Positives = 119/229 (52%), Gaps = 23/229 (10%) |
NCBI |
Show Blast
|
XP_002950917.1 |
hypothetical protein VOLCADRAFT_104906 [Volvox carteri f. nagariensis]
Evalue: 1e-25 | Bitscore: 121 Identities = 70/167 (42%), Positives = 95/167 (57%), Gaps = 6/167 (4%) |
NCBI |
Show Blast
|
EFN54045.1 |
hypothetical protein CHLNCDRAFT_136117 [Chlorella variabilis]
Evalue: 1e-23 | Bitscore: 114 Identities = 81/281 (29%), Positives = 122/281 (43%), Gaps = 64/281 (23%) |
NCBI |
Show Blast
|
XP_002180824.1 |
predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Evalue: 5e-19 | Bitscore: 99 Identities = 74/243 (30%), Positives = 113/243 (47%), Gaps = 21/243 (9%) |
NCBI |
Show Blast
|
XP_002290392.1 |
predicted protein [Thalassiosira pseudonana CCMP1335]
Evalue: 9e-14 | Bitscore: 82 Identities = 57/219 (26%), Positives = 103/219 (47%), Gaps = 17/219 (8%) |
NCBI |
Show Blast
|
ABD74926.1 |
hypothetical protein [Sinorhizobium fredii]
Evalue: 6e-06 | Bitscore: 56 Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 0/66 (0%) |
NCBI |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
XP_002508760.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 4e-60 | Bitscore: 236 Identities = 118/234 (50%), Positives = 154/234 (66%), Gaps = 20/234 (9%) |
NCBI |
Show Blast
|
XP_001417809.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 6e-54 | Bitscore: 215 Identities = 125/219 (57%), Positives = 150/219 (68%), Gaps = 8/219 (4%) |
NCBI |
Show Blast
|
XP_003079443.1 |
unnamed protein product [Ostreococcus tauri]
Evalue: 5e-53 | Bitscore: 212 Identities = 122/217 (56%), Positives = 143/217 (66%), Gaps = 6/217 (3%) |
NCBI |
Show Blast
|
XP_001699147.1 |
hypothetical protein CHLREDRAFT_185300 [Chlamydomonas reinhardtii]
Evalue: 6e-32 | Bitscore: 142 Identities = 84/213 (39%), Positives = 116/213 (54%), Gaps = 7/213 (3%) |
NCBI |
Show Blast
|
XP_001757921.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 3e-31 | Bitscore: 140 Identities = 84/229 (37%), Positives = 119/229 (52%), Gaps = 23/229 (10%) |
NCBI |
Show Blast
|
XP_002950917.1 |
hypothetical protein VOLCADRAFT_104906 [Volvox carteri f. nagariensis]
Evalue: 1e-25 | Bitscore: 121 Identities = 70/167 (42%), Positives = 95/167 (57%), Gaps = 6/167 (4%) |
NCBI |
Show Blast
|
EFN54045.1 |
hypothetical protein CHLNCDRAFT_136117 [Chlorella variabilis]
Evalue: 1e-23 | Bitscore: 114 Identities = 81/281 (29%), Positives = 122/281 (43%), Gaps = 64/281 (23%) |
NCBI |
Show Blast
|
XP_002180824.1 |
predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Evalue: 5e-19 | Bitscore: 99 Identities = 74/243 (30%), Positives = 113/243 (47%), Gaps = 21/243 (9%) |
NCBI |
Show Blast
|
XP_002290392.1 |
predicted protein [Thalassiosira pseudonana CCMP1335]
Evalue: 9e-14 | Bitscore: 82 Identities = 57/219 (26%), Positives = 103/219 (47%), Gaps = 17/219 (8%) |
NCBI |
Show Blast
|
ABD74926.1 |
hypothetical protein [Sinorhizobium fredii]
Evalue: 6e-06 | Bitscore: 56 Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 0/66 (0%) |
NCBI |
Show Blast
|
No hits found against database Self with an e-value better than 1e-3. |
No hits found against database SwissP with an e-value better than 1e-3. |
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Alternative Models
- n/a
-
Protein
Associated ESTs/cDNAs
- n/a
-
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