- Gene ID
- Bathy01g06200
- Locus
- Bathy01g06200
- Functional Description
- predicted protein
- Gene Type
- protein-coding gene
- Contig
- bathy_chrom_01
- Last Modified On
- 12 July 2011 21h39
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- predicted protein
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- n/a
-
Protein Domains
| Domain ID | Description | Database |
|---|
|
IPR012335 |
Thioredoxin fold |
InterPro |
|
PTHR10984 |
ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN |
HMMPanther |
|
IPR017936 |
Thioredoxin-like |
InterPro |
|
IPR013766 |
Thioredoxin domain |
InterPro |
|
IPR012936 |
Domain of unknown function DUF1692 |
InterPro |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| XP_002508296.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 1e-136 | Bitscore: 491
Identities = 267/533 (50%), Positives = 356/533 (67%), Gaps = 35/533 (7%) |
NCBI |
Show Blast
|
| XP_003080932.1 |
Thioredoxin/protein disulfide isomerase (ISS) [Ostreococcus tauri]
Evalue: 5e-133 | Bitscore: 479
Identities = 257/533 (48%), Positives = 351/533 (66%), Gaps = 38/533 (7%) |
NCBI |
Show Blast
|
| XP_001419434.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 2e-127 | Bitscore: 460
Identities = 248/521 (48%), Positives = 347/521 (67%), Gaps = 46/521 (9%) |
NCBI |
Show Blast
|
| XP_003058982.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 4e-117 | Bitscore: 426
Identities = 242/529 (46%), Positives = 336/529 (64%), Gaps = 48/529 (9%) |
NCBI |
Show Blast
|
| XP_001699770.1 |
protein disulfide isomerase [Chlamydomonas reinhardtii]
Evalue: 1e-88 | Bitscore: 332
Identities = 205/530 (39%), Positives = 300/530 (57%), Gaps = 67/530 (13%) |
NCBI |
Show Blast
|
| NP_001059821.1 |
Os07g0524100 [Oryza sativa Japonica Group] sp|Q69SA9.1|PDI54_ORYSJ RecName: Full=Protein disulfide isomerase-like 5-4; Short=OsPDIL5-4;
Evalue: 2e-85 | Bitscore: 321
Identities = 213/535 (40%), Positives = 284/535 (53%), Gaps = 65/535 (12%) |
NCBI |
Show Blast
|
| CBG91903.1 |
putative PDI-like protein [Triticum aestivum]
Evalue: 5e-85 | Bitscore: 320
Identities = 209/530 (39%), Positives = 285/530 (54%), Gaps = 59/530 (11%) |
NCBI |
Show Blast
|
| BAJ86285.1 |
predicted protein [Hordeum vulgare subsp. vulgare]
Evalue: 5e-84 | Bitscore: 316
Identities = 207/530 (39%), Positives = 285/530 (54%), Gaps = 59/530 (11%) |
NCBI |
Show Blast
|
| Q69SA9 |
Protein disulfide isomerase-like 5-4 OS=Oryza sativa subsp. japonica GN=PDIL5-4 PE=2 SV=1
Evalue: 5e-85 | Bitscore: 315
Identities = 201/527 (38%), Positives = 266/527 (50%), Gaps = 53/527 (10%) |
SwissP |
Show Blast
|
| ACG39185.1 |
PDIL5-4 - Zea mays protein disulfide isomerase
Evalue: 1e-83 | Bitscore: 315
Identities = 207/534 (39%), Positives = 288/534 (54%), Gaps = 63/534 (12%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| XP_002508296.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 1e-136 | Bitscore: 491
Identities = 267/533 (50%), Positives = 356/533 (67%), Gaps = 35/533 (7%) |
NCBI |
Show Blast
|
| XP_003080932.1 |
Thioredoxin/protein disulfide isomerase (ISS) [Ostreococcus tauri]
Evalue: 5e-133 | Bitscore: 479
Identities = 257/533 (48%), Positives = 351/533 (66%), Gaps = 38/533 (7%) |
NCBI |
Show Blast
|
| XP_001419434.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 2e-127 | Bitscore: 460
Identities = 248/521 (48%), Positives = 347/521 (67%), Gaps = 46/521 (9%) |
NCBI |
Show Blast
|
| XP_003058982.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 4e-117 | Bitscore: 426
Identities = 242/529 (46%), Positives = 336/529 (64%), Gaps = 48/529 (9%) |
NCBI |
Show Blast
|
| XP_001699770.1 |
protein disulfide isomerase [Chlamydomonas reinhardtii]
Evalue: 1e-88 | Bitscore: 332
Identities = 205/530 (39%), Positives = 300/530 (57%), Gaps = 67/530 (13%) |
NCBI |
Show Blast
|
| NP_001059821.1 |
Os07g0524100 [Oryza sativa Japonica Group] sp|Q69SA9.1|PDI54_ORYSJ RecName: Full=Protein disulfide isomerase-like 5-4; Short=OsPDIL5-4;
Evalue: 2e-85 | Bitscore: 321
Identities = 213/535 (40%), Positives = 284/535 (53%), Gaps = 65/535 (12%) |
NCBI |
Show Blast
|
| CBG91903.1 |
putative PDI-like protein [Triticum aestivum]
Evalue: 5e-85 | Bitscore: 320
Identities = 209/530 (39%), Positives = 285/530 (54%), Gaps = 59/530 (11%) |
NCBI |
Show Blast
|
| BAJ86285.1 |
predicted protein [Hordeum vulgare subsp. vulgare]
Evalue: 5e-84 | Bitscore: 316
Identities = 207/530 (39%), Positives = 285/530 (54%), Gaps = 59/530 (11%) |
NCBI |
Show Blast
|
| ACG39185.1 |
PDIL5-4 - Zea mays protein disulfide isomerase
Evalue: 1e-83 | Bitscore: 315
Identities = 207/534 (39%), Positives = 288/534 (54%), Gaps = 63/534 (12%) |
NCBI |
Show Blast
|
| NP_001105762.1 |
protein disulfide isomerase12 [Zea mays]
Evalue: 2e-83 | Bitscore: 314
Identities = 208/534 (39%), Positives = 290/534 (54%), Gaps = 65/534 (12%) |
NCBI |
Show Blast
|
| No hits found against database Self with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q69SA9 |
Protein disulfide isomerase-like 5-4 OS=Oryza sativa subsp. japonica GN=PDIL5-4 PE=2 SV=1
Evalue: 5e-85 | Bitscore: 315
Identities = 201/527 (38%), Positives = 266/527 (50%), Gaps = 53/527 (10%) |
SwissP |
Show Blast
|
| Q9T042 |
Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana GN=PDIL5-4 PE=2 SV=1
Evalue: 4e-78 | Bitscore: 292
Identities = 186/526 (35%), Positives = 272/526 (51%), Gaps = 56/526 (10%) |
SwissP |
Show Blast
|
| Q9LJU2 |
Protein disulfide-isomerase 5-3 OS=Arabidopsis thaliana GN=PDIL5-3 PE=2 SV=1
Evalue: 8e-78 | Bitscore: 291
Identities = 196/527 (37%), Positives = 275/527 (52%), Gaps = 55/527 (10%) |
SwissP |
Show Blast
|
| Q54EN4 |
Protein disulfide-isomerase 2 OS=Dictyostelium discoideum GN=pdi2 PE=3 SV=1
Evalue: 8e-14 | Bitscore: 79
Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 18/101 (17%) |
SwissP |
Show Blast
|
| Q9BS26 |
Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
Evalue: 6e-11 | Bitscore: 69
Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 13/115 (11%) |
SwissP |
Show Blast
|
| Q00248 |
Protein disulfide-isomerase OS=Aspergillus oryzae GN=pdiA PE=3 SV=1
Evalue: 8e-11 | Bitscore: 68
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 18/113 (15%) |
SwissP |
Show Blast
|
| Q3T0L2 |
Endoplasmic reticulum resident protein 44 OS=Bos taurus GN=ERP44 PE=2 SV=1
Evalue: 2e-10 | Bitscore: 67
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 15/130 (11%) |
SwissP |
Show Blast
|
| Q9D1Q6 |
Endoplasmic reticulum resident protein 44 OS=Mus musculus GN=Erp44 PE=1 SV=1
Evalue: 3e-10 | Bitscore: 67
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 15/130 (11%) |
SwissP |
Show Blast
|
| Q9DC16 |
Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Mus musculus GN=Ergic1 PE=1 SV=1
Evalue: 5e-10 | Bitscore: 66
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 2/102 (1%) |
SwissP |
Show Blast
|
| Q969X5 |
Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Homo sapiens GN=ERGIC1 PE=1 SV=1
Evalue: 5e-10 | Bitscore: 66
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 2/102 (1%) |
SwissP |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Alternative Models
- n/a
-
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
| EST ID | SuperContig_0.clus369.Contig1 |
Support Model | Y |
More Info |
| Mapping Location | 1125445..1125964 |
Strand + |
| EST ID | SuperContig_0.clus334.Contig1 |
Support Model | Y |
More Info |
| Comment | EST is non-spliced and has no reliable strand information |
| Mapping Location | 1126000..1126432 |
Strand - |
| EST ID | SuperContig_0.clus762.Contig1 |
Support Model | Y |
More Info |
| Comment | EST is non-spliced and has no reliable strand information |
| Mapping Location | 1126676..1127171 |
Strand - |
|
