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Bathycoccus prasinos


Gene ID
Bathy01g03600
Locus
Bathy01g03600
Functional Description
glutaredoxin-like protein
Gene Type
protein-coding gene
Contig
bathy_chrom_01
Last Modified On
12 July 2011 21h39
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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pico-PLAZA - lookup this gene in the PLAZA resource

Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
glutaredoxin-like protein
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

n/a
 

Protein Domains 


Domain IDDescriptionDatabase
IPR012335 Thioredoxin fold InterPro
IPR002109 Glutaredoxin InterPro
IPR004480 Monothiol glutaredoxin-related InterPro
IPR012336 Thioredoxin-like fold InterPro

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
XP_001415588.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 8e-74 | Bitscore: 281
Identities = 126/210 (60%), Positives = 166/210 (79%), Gaps = 2/210 (1%)
NCBI
Show Blast
XP_003074487.1 Glutaredoxin and related proteins (ISS) [Ostreococcus tauri]
Evalue: 2e-68 | Bitscore: 263
Identities = 119/202 (59%), Positives = 155/202 (77%), Gaps = 2/202 (1%)
NCBI
Show Blast
XP_003055979.1 predicted protein [Micromonas pusilla CCMP1545]
Evalue: 2e-60 | Bitscore: 236
Identities = 109/228 (48%), Positives = 155/228 (68%), Gaps = 1/228 (0%)
NCBI
Show Blast
XP_002507136.1 glutaredoxin-related protein [Micromonas sp. RCC299]
Evalue: 9e-54 | Bitscore: 214
Identities = 101/211 (48%), Positives = 141/211 (67%), Gaps = 1/211 (0%)
NCBI
Show Blast
XP_001785320.1 predicted protein [Physcomitrella patens subsp. patens]
Evalue: 2e-53 | Bitscore: 213
Identities = 99/218 (45%), Positives = 146/218 (67%), Gaps = 3/218 (1%)
NCBI
Show Blast
XP_002981162.1 hypothetical protein SELMODRAFT_57444 [Selaginella moellendorffii]
Evalue: 4e-47 | Bitscore: 192
Identities = 89/210 (42%), Positives = 137/210 (65%), Gaps = 5/210 (2%)
NCBI
Show Blast
XP_002982642.1 hypothetical protein SELMODRAFT_57451 [Selaginella moellendorffii]
Evalue: 9e-47 | Bitscore: 191
Identities = 88/210 (42%), Positives = 137/210 (65%), Gaps = 5/210 (2%)
NCBI
Show Blast
XP_001689744.1 glutaredoxin, CGFS type [Chlamydomonas reinhardtii]
Evalue: 1e-46 | Bitscore: 191
Identities = 94/210 (45%), Positives = 131/210 (62%), Gaps = 3/210 (1%)
NCBI
Show Blast
EFN56086.1 hypothetical protein CHLNCDRAFT_31055 [Chlorella variabilis]
Evalue: 1e-46 | Bitscore: 190
Identities = 93/217 (43%), Positives = 134/217 (62%), Gaps = 3/217 (1%)
NCBI
Show Blast
XP_002948509.1 CGFS type glutaredoxin 6 [Volvox carteri f. nagariensis]
Evalue: 2e-45 | Bitscore: 187
Identities = 90/215 (42%), Positives = 134/215 (62%), Gaps = 5/215 (2%)
NCBI
Show Blast

Gene Structure 

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Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
-
Structure Quality
2

Alternative Models  

n/a
 

CDS  

Locus ID
Bathy01g03600
Redo Blast
CDS Length
849 nucleotides
CDS Sequence

Protein 

Locus ID
Bathy01g03600
Redo Blast
Protein Length
283 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

n/a