- Gene ID
- Bathy01g03590
- Locus
- Bathy01g03590
- Functional Description
- glutamyl-tRNA synthetase
- Gene Type
- protein-coding gene
- Contig
- bathy_chrom_01
- Last Modified On
- 12 July 2011 21h39
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
Sorry, only history comparison allowed for non logged in users!! |
Compare this version with : Go! |
Link Out
pico-PLAZA - lookup this gene in the PLAZA resource |
Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- glutamyl-tRNA synthetase
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
1.
cytoplasm
- Molecular Function
-
1.
nucleotide binding
2.
aminoacyl-tRNA ligase activity
3.
ATP binding
- Biological Process
-
1.
translation
2.
tRNA aminoacylation for protein translation
Protein Domains
Domain ID | Description | Database |
IPR001412 |
Aminoacyl-tRNA synthetase, class I, conserved site |
InterPro |
IPR020061 |
Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain |
InterPro |
IPR020056 |
Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain |
InterPro |
IPR011035 |
Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain |
InterPro |
IPR020058 |
Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain |
InterPro |
IPR014729 |
Rossmann-like alpha/beta/alpha sandwich fold |
InterPro |
IPR000924 |
Glutamyl/glutaminyl-tRNA synthetase, class Ic |
InterPro |
IPR010987 |
Glutathione S-transferase, C-terminal-like |
InterPro |
IPR004526 |
Glutamyl-tRNA synthetase, class Ic, archaeal/eukaryotic cytosolic |
InterPro |
G3DSA:3.90.800.10 |
no description |
Gene3D |
IPR020059 |
Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain |
InterPro |
Protein Homologs
ProteinID | Description / BlastScore | Database | Actions |
XP_001415923.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 696 Identities = 332/518 (64%), Positives = 410/518 (79%), Gaps = 2/518 (0%) |
NCBI |
Show Blast
|
XP_003074488.1 |
putative glutamyl-tRNA synthetase (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 665 Identities = 352/648 (54%), Positives = 442/648 (68%), Gaps = 37/648 (6%) |
NCBI |
Show Blast
|
XP_003056394.1 |
glutamyl-tRNA synthetase [Micromonas pusilla CCMP1545]
Evalue: 6e-170 | Bitscore: 602 Identities = 294/520 (57%), Positives = 380/520 (73%), Gaps = 5/520 (1%) |
NCBI |
Show Blast
|
XP_002958061.1 |
hypothetical protein VOLCADRAFT_77768 [Volvox carteri f. nagariensis]
Evalue: 5e-162 | Bitscore: 576 Identities = 299/523 (57%), Positives = 372/523 (71%), Gaps = 10/523 (2%) |
NCBI |
Show Blast
|
XP_001701416.1 |
gln-glu non-discriminatory tRNA synthetase [Chlamydomonas reinhardtii]
Evalue: 2e-161 | Bitscore: 574 Identities = 299/525 (57%), Positives = 368/525 (70%), Gaps = 11/525 (2%) |
NCBI |
Show Blast
|
ABR18375.1 |
unknown [Picea sitchensis]
Evalue: 1e-160 | Bitscore: 572 Identities = 307/654 (47%), Positives = 412/654 (63%), Gaps = 40/654 (6%) |
NCBI |
Show Blast
|
XP_002329985.1 |
predicted protein [Populus trichocarpa]
Evalue: 8e-160 | Bitscore: 568 Identities = 300/648 (46%), Positives = 412/648 (64%), Gaps = 27/648 (4%) |
NCBI |
Show Blast
|
XP_001761021.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 2e-158 | Bitscore: 564 Identities = 277/516 (54%), Positives = 365/516 (71%), Gaps = 2/516 (0%) |
NCBI |
Show Blast
|
AAC13597.1 |
similar to aminoacyl-tRNA synthetases [Arabidopsis thaliana]
Evalue: 6e-158 | Bitscore: 562 Identities = 305/648 (47%), Positives = 404/648 (62%), Gaps = 32/648 (5%) |
NCBI |
Show Blast
|
NP_850874.1 |
glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putative [Arabidopsis thaliana]
Evalue: 8e-158 | Bitscore: 562 Identities = 305/648 (47%), Positives = 404/648 (62%), Gaps = 32/648 (5%) |
NCBI |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
XP_001415923.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 696 Identities = 332/518 (64%), Positives = 410/518 (79%), Gaps = 2/518 (0%) |
NCBI |
Show Blast
|
XP_003074488.1 |
putative glutamyl-tRNA synthetase (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 665 Identities = 352/648 (54%), Positives = 442/648 (68%), Gaps = 37/648 (6%) |
NCBI |
Show Blast
|
XP_003056394.1 |
glutamyl-tRNA synthetase [Micromonas pusilla CCMP1545]
Evalue: 6e-170 | Bitscore: 602 Identities = 294/520 (57%), Positives = 380/520 (73%), Gaps = 5/520 (1%) |
NCBI |
Show Blast
|
XP_002958061.1 |
hypothetical protein VOLCADRAFT_77768 [Volvox carteri f. nagariensis]
Evalue: 5e-162 | Bitscore: 576 Identities = 299/523 (57%), Positives = 372/523 (71%), Gaps = 10/523 (2%) |
NCBI |
Show Blast
|
XP_001701416.1 |
gln-glu non-discriminatory tRNA synthetase [Chlamydomonas reinhardtii]
Evalue: 2e-161 | Bitscore: 574 Identities = 299/525 (57%), Positives = 368/525 (70%), Gaps = 11/525 (2%) |
NCBI |
Show Blast
|
ABR18375.1 |
unknown [Picea sitchensis]
Evalue: 1e-160 | Bitscore: 572 Identities = 307/654 (47%), Positives = 412/654 (63%), Gaps = 40/654 (6%) |
NCBI |
Show Blast
|
XP_002329985.1 |
predicted protein [Populus trichocarpa]
Evalue: 8e-160 | Bitscore: 568 Identities = 300/648 (46%), Positives = 412/648 (64%), Gaps = 27/648 (4%) |
NCBI |
Show Blast
|
XP_001761021.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 2e-158 | Bitscore: 564 Identities = 277/516 (54%), Positives = 365/516 (71%), Gaps = 2/516 (0%) |
NCBI |
Show Blast
|
AAC13597.1 |
similar to aminoacyl-tRNA synthetases [Arabidopsis thaliana]
Evalue: 6e-158 | Bitscore: 562 Identities = 305/648 (47%), Positives = 404/648 (62%), Gaps = 32/648 (5%) |
NCBI |
Show Blast
|
NP_850874.1 |
glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putative [Arabidopsis thaliana]
Evalue: 8e-158 | Bitscore: 562 Identities = 305/648 (47%), Positives = 404/648 (62%), Gaps = 32/648 (5%) |
NCBI |
Show Blast
|
No hits found against database Self with an e-value better than 1e-3. |
ProteinID | Description / BlastScore | Database | Actions |
P46655 |
Glutamyl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae GN=GUS1 PE=1 SV=3
Evalue: 1e-135 | Bitscore: 483 Identities = 250/528 (47%), Positives = 346/528 (65%), Gaps = 9/528 (1%) |
SwissP |
Show Blast
|
Q8CGC7 |
Bifunctional aminoacyl-tRNA synthetase OS=Mus musculus GN=Eprs PE=2 SV=3
Evalue: 1e-133 | Bitscore: 476 Identities = 250/523 (47%), Positives = 334/523 (63%), Gaps = 8/523 (1%) |
SwissP |
Show Blast
|
O13775 |
Probable glutamyl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe GN=SPAC17A5.15c PE=1 SV=1
Evalue: 1e-132 | Bitscore: 473 Identities = 244/522 (46%), Positives = 333/522 (63%), Gaps = 5/522 (0%) |
SwissP |
Show Blast
|
P07814 |
Bifunctional aminoacyl-tRNA synthetase OS=Homo sapiens GN=EPRS PE=1 SV=5
Evalue: 1e-131 | Bitscore: 470 Identities = 248/523 (47%), Positives = 331/523 (63%), Gaps = 8/523 (1%) |
SwissP |
Show Blast
|
Q54KB8 |
Probable glutamyl-tRNA synthetase, cytoplasmic OS=Dictyostelium discoideum GN=gluS PE=2 SV=1
Evalue: 1e-116 | Bitscore: 419 Identities = 220/519 (42%), Positives = 318/519 (61%), Gaps = 6/519 (1%) |
SwissP |
Show Blast
|
Q8SSE4 |
Probable glutamyl-tRNA synthetase, cytoplasmic OS=Encephalitozoon cuniculi GN=ECU02_1210 PE=3 SV=1
Evalue: 1e-110 | Bitscore: 401 Identities = 222/518 (42%), Positives = 312/518 (60%), Gaps = 15/518 (2%) |
SwissP |
Show Blast
|
A9CSZ1 |
Probable glutamyl-tRNA synthetase, cytoplasmic OS=Enterocytozoon bieneusi (strain H348) GN=EBI_22577 PE=3 SV=1
Evalue: 3e-83 | Bitscore: 310 Identities = 179/498 (35%), Positives = 289/498 (58%), Gaps = 19/498 (3%) |
SwissP |
Show Blast
|
C4VBI7 |
Probable glutamyl-tRNA synthetase, cytoplasmic OS=Nosema ceranae (strain BRL01) GN=NCER_102160 PE=3 SV=1
Evalue: 2e-78 | Bitscore: 294 Identities = 171/438 (39%), Positives = 246/438 (56%), Gaps = 8/438 (1%) |
SwissP |
Show Blast
|
Q57RP8 |
Glutaminyl-tRNA synthetase OS=Salmonella choleraesuis GN=glnS PE=3 SV=1
Evalue: 9e-71 | Bitscore: 268 Identities = 170/515 (33%), Positives = 264/515 (51%), Gaps = 24/515 (4%) |
SwissP |
Show Blast
|
Q8ZQX5 |
Glutaminyl-tRNA synthetase OS=Salmonella typhimurium GN=glnS PE=3 SV=3
Evalue: 1e-70 | Bitscore: 268 Identities = 170/515 (33%), Positives = 264/515 (51%), Gaps = 24/515 (4%) |
SwissP |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Alternative Models
- n/a
-
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
EST ID | SuperContig_0.clus685.Contig1 |
Support Model | Y |
More Info |
Comment | EST is non-spliced and has no reliable strand information |
Mapping Location | 669099..669509 |
Strand - |
EST ID | SuperContig_0.clus1122.Contig1 |
Support Model | Y |
More Info |
Comment | EST is non-spliced and has no reliable strand information |
Mapping Location | 670586..670886 |
Strand - |
|