- Gene ID
- Bathy01g02300
- Locus
- Bathy01g02300
- Functional Description
- unnamed protein product
- Gene Type
- protein-coding gene
- Contig
- bathy_chrom_01
- Last Modified On
- 12 July 2011 21h39
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
| Sorry, only history comparison allowed for non logged in users!! |
Compare this version with :
Go! |
Link Out
pico-PLAZA - lookup this gene in the PLAZA resource |
Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- unnamed protein product
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- n/a
-
Protein Domains
| Domain ID | Description | Database |
|---|
|
IPR013057 |
Amino acid transporter, transmembrane |
InterPro |
|
PTHR22950 |
FAMILY NOT NAMED |
HMMPanther |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| XP_001415816.1 |
AAAP family transporter: amino acid [Ostreococcus lucimarinus CCE9901]
Evalue: 3e-62 | Bitscore: 245
Identities = 163/544 (30%), Positives = 294/544 (54%), Gaps = 39/544 (7%) |
NCBI |
Show Blast
|
| XP_002956596.1 |
hypothetical protein VOLCADRAFT_97580 [Volvox carteri f. nagariensis]
Evalue: 5e-49 | Bitscore: 201
Identities = 107/307 (35%), Positives = 173/307 (56%), Gaps = 14/307 (5%) |
NCBI |
Show Blast
|
| XP_001699884.1 |
amino acid transporter [Chlamydomonas reinhardtii]
Evalue: 8e-49 | Bitscore: 201
Identities = 105/306 (34%), Positives = 173/306 (57%), Gaps = 21/306 (7%) |
NCBI |
Show Blast
|
| XP_003074291.1 |
Amino acid transporter protein (ISS) [Ostreococcus tauri]
Evalue: 2e-47 | Bitscore: 196
Identities = 149/504 (30%), Positives = 255/504 (51%), Gaps = 35/504 (7%) |
NCBI |
Show Blast
|
| EFN58068.1 |
hypothetical protein CHLNCDRAFT_142340 [Chlorella variabilis]
Evalue: 5e-31 | Bitscore: 142
Identities = 78/250 (31%), Positives = 137/250 (55%), Gaps = 5/250 (2%) |
NCBI |
Show Blast
|
| XP_001902801.1 |
Transmembrane amino acid transporter protein [Brugia malayi]
Evalue: 5e-31 | Bitscore: 141
Identities = 101/369 (27%), Positives = 175/369 (47%), Gaps = 23/369 (6%) |
NCBI |
Show Blast
|
| XP_001640328.1 |
predicted protein [Nematostella vectensis]
Evalue: 9e-30 | Bitscore: 137
Identities = 92/366 (25%), Positives = 173/366 (47%), Gaps = 20/366 (5%) |
NCBI |
Show Blast
|
| XP_002109780.1 |
hypothetical protein TRIADDRAFT_53014 [Trichoplax adhaerens]
Evalue: 1e-29 | Bitscore: 137
Identities = 107/421 (25%), Positives = 189/421 (45%), Gaps = 47/421 (11%) |
NCBI |
Show Blast
|
| XP_002122579.1 |
PREDICTED: similar to Putative sodium-coupled neutral amino acid transporter 10 [Ciona intestinalis]
Evalue: 2e-28 | Bitscore: 133
Identities = 104/376 (28%), Positives = 183/376 (49%), Gaps = 32/376 (9%) |
NCBI |
Show Blast
|
| CAP38779.2 |
hypothetical protein CBG_22126 [Caenorhabditis briggsae AF16]
Evalue: 3e-27 | Bitscore: 129
Identities = 104/369 (28%), Positives = 174/369 (47%), Gaps = 22/369 (6%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| XP_001415816.1 |
AAAP family transporter: amino acid [Ostreococcus lucimarinus CCE9901]
Evalue: 3e-62 | Bitscore: 245
Identities = 163/544 (30%), Positives = 294/544 (54%), Gaps = 39/544 (7%) |
NCBI |
Show Blast
|
| XP_002956596.1 |
hypothetical protein VOLCADRAFT_97580 [Volvox carteri f. nagariensis]
Evalue: 5e-49 | Bitscore: 201
Identities = 107/307 (35%), Positives = 173/307 (56%), Gaps = 14/307 (5%) |
NCBI |
Show Blast
|
| XP_001699884.1 |
amino acid transporter [Chlamydomonas reinhardtii]
Evalue: 8e-49 | Bitscore: 201
Identities = 105/306 (34%), Positives = 173/306 (57%), Gaps = 21/306 (7%) |
NCBI |
Show Blast
|
| XP_003074291.1 |
Amino acid transporter protein (ISS) [Ostreococcus tauri]
Evalue: 2e-47 | Bitscore: 196
Identities = 149/504 (30%), Positives = 255/504 (51%), Gaps = 35/504 (7%) |
NCBI |
Show Blast
|
| EFN58068.1 |
hypothetical protein CHLNCDRAFT_142340 [Chlorella variabilis]
Evalue: 5e-31 | Bitscore: 142
Identities = 78/250 (31%), Positives = 137/250 (55%), Gaps = 5/250 (2%) |
NCBI |
Show Blast
|
| XP_001902801.1 |
Transmembrane amino acid transporter protein [Brugia malayi]
Evalue: 5e-31 | Bitscore: 141
Identities = 101/369 (27%), Positives = 175/369 (47%), Gaps = 23/369 (6%) |
NCBI |
Show Blast
|
| XP_001640328.1 |
predicted protein [Nematostella vectensis]
Evalue: 9e-30 | Bitscore: 137
Identities = 92/366 (25%), Positives = 173/366 (47%), Gaps = 20/366 (5%) |
NCBI |
Show Blast
|
| XP_002109780.1 |
hypothetical protein TRIADDRAFT_53014 [Trichoplax adhaerens]
Evalue: 1e-29 | Bitscore: 137
Identities = 107/421 (25%), Positives = 189/421 (45%), Gaps = 47/421 (11%) |
NCBI |
Show Blast
|
| XP_002122579.1 |
PREDICTED: similar to Putative sodium-coupled neutral amino acid transporter 10 [Ciona intestinalis]
Evalue: 2e-28 | Bitscore: 133
Identities = 104/376 (28%), Positives = 183/376 (49%), Gaps = 32/376 (9%) |
NCBI |
Show Blast
|
| CAP38779.2 |
hypothetical protein CBG_22126 [Caenorhabditis briggsae AF16]
Evalue: 3e-27 | Bitscore: 129
Identities = 104/369 (28%), Positives = 174/369 (47%), Gaps = 22/369 (6%) |
NCBI |
Show Blast
|
| No hits found against database Self with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q9H2H9 |
Sodium-coupled neutral amino acid transporter 1 OS=Homo sapiens GN=SLC38A1 PE=1 SV=1
Evalue: 8e-28 | Bitscore: 126
Identities = 97/381 (25%), Positives = 177/381 (46%), Gaps = 26/381 (6%) |
SwissP |
Show Blast
|
| Q9DCP2 |
Sodium-coupled neutral amino acid transporter 3 OS=Mus musculus GN=Slc38a3 PE=1 SV=1
Evalue: 6e-27 | Bitscore: 124
Identities = 92/394 (23%), Positives = 174/394 (44%), Gaps = 37/394 (9%) |
SwissP |
Show Blast
|
| Q9JM15 |
Sodium-coupled neutral amino acid transporter 1 OS=Rattus norvegicus GN=Slc38a1 PE=1 SV=1
Evalue: 4e-26 | Bitscore: 121
Identities = 95/383 (24%), Positives = 177/383 (46%), Gaps = 32/383 (8%) |
SwissP |
Show Blast
|
| Q28HE5 |
Probable sodium-coupled neutral amino acid transporter 6 OS=Xenopus tropicalis GN=slc38a6 PE=2 SV=1
Evalue: 9e-26 | Bitscore: 120
Identities = 104/417 (24%), Positives = 188/417 (45%), Gaps = 22/417 (5%) |
SwissP |
Show Blast
|
| Q9HBR0 |
Putative sodium-coupled neutral amino acid transporter 10 OS=Homo sapiens GN=SLC38A10 PE=1 SV=2
Evalue: 1e-25 | Bitscore: 119
Identities = 92/381 (24%), Positives = 179/381 (46%), Gaps = 47/381 (12%) |
SwissP |
Show Blast
|
| Q5RC98 |
Putative sodium-coupled neutral amino acid transporter 10 OS=Pongo abelii GN=SLC38A10 PE=2 SV=1
Evalue: 2e-25 | Bitscore: 119
Identities = 92/381 (24%), Positives = 179/381 (46%), Gaps = 47/381 (12%) |
SwissP |
Show Blast
|
| Q5SPB1 |
Sodium-coupled neutral amino acid transporter 2 OS=Danio rerio GN=slc38a2 PE=2 SV=1
Evalue: 3e-25 | Bitscore: 118
Identities = 87/382 (22%), Positives = 174/382 (45%), Gaps = 24/382 (6%) |
SwissP |
Show Blast
|
| Q99624 |
Sodium-coupled neutral amino acid transporter 3 OS=Homo sapiens GN=SLC38A3 PE=2 SV=1
Evalue: 4e-25 | Bitscore: 117
Identities = 91/400 (22%), Positives = 169/400 (42%), Gaps = 51/400 (12%) |
SwissP |
Show Blast
|
| Q8IZM9 |
Probable sodium-coupled neutral amino acid transporter 6 OS=Homo sapiens GN=SLC38A6 PE=2 SV=2
Evalue: 4e-25 | Bitscore: 117
Identities = 98/378 (25%), Positives = 176/378 (46%), Gaps = 23/378 (6%) |
SwissP |
Show Blast
|
| Q8K2P7 |
Sodium-coupled neutral amino acid transporter 1 OS=Mus musculus GN=Slc38a1 PE=1 SV=1
Evalue: 1e-24 | Bitscore: 116
Identities = 97/383 (25%), Positives = 180/383 (46%), Gaps = 32/383 (8%) |
SwissP |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Alternative Models
- n/a
-
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
| EST ID | SuperContig_0.clus249.Contig1 |
Support Model | Y |
More Info |
| Mapping Location | 428610..428883 |
Strand - |
|
