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Bathycoccus prasinos


Gene ID
Bathy01g00500
Locus
Bathy01g00500
Functional Description
polyphosphate kinase
Gene Type
protein-coding gene
Contig
bathy_chrom_01
Last Modified On
12 July 2011 21h39
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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pico-PLAZA - lookup this gene in the PLAZA resource

Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
polyphosphate kinase
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
1.
polyphosphate kinase complex

Molecular Function
1.
polyphosphate kinase activity

Biological Process
1.
polyphosphate biosynthetic process

Protein Domains 


Domain IDDescriptionDatabase
G3DSA:3.30.1840.10 no description Gene3D
IPR003414 Polyphosphate kinase InterPro
G3DSA:3.30.870.10 no description Gene3D
SSF56024 Phospholipase D/nuclease superfamily

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
XP_003074121.1 Polyphosphate kinase (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 998
Identities = 506/871 (58%), Positives = 641/871 (74%), Gaps = 39/871 (4%)
NCBI
Show Blast
XP_001415736.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 984
Identities = 498/836 (60%), Positives = 631/836 (75%), Gaps = 26/836 (3%)
NCBI
Show Blast
XP_001778691.1 predicted protein [Physcomitrella patens subsp. patens]
Evalue: 0.0 | Bitscore: 682
Identities = 375/767 (49%), Positives = 495/767 (65%), Gaps = 44/767 (6%)
NCBI
Show Blast
XP_001785112.1 predicted protein [Physcomitrella patens subsp. patens]
Evalue: 0.0 | Bitscore: 669
Identities = 382/773 (49%), Positives = 507/773 (66%), Gaps = 55/773 (7%)
NCBI
Show Blast
ZP_06306937.1 Polyphosphate kinase [Cylindrospermopsis raciborskii CS-505]
Evalue: 2e-153 | Bitscore: 548
Identities = 314/715 (44%), Positives = 444/715 (62%), Gaps = 28/715 (4%)
NCBI
Show Blast
YP_003290293.1 Polyphosphate kinase [Rhodothermus marinus DSM 4252]
Evalue: 2e-152 | Bitscore: 545
Identities = 317/687 (46%), Positives = 436/687 (63%), Gaps = 33/687 (5%)
NCBI
Show Blast
ZP_01730969.1 polyphosphate kinase [Cyanothece sp. CCY0110]
Evalue: 6e-152 | Bitscore: 543
Identities = 306/698 (44%), Positives = 430/698 (62%), Gaps = 28/698 (4%)
NCBI
Show Blast
YP_002376595.1 polyphosphate kinase [Cyanothece sp. PCC 7424]
Evalue: 1e-151 | Bitscore: 542
Identities = 308/695 (44%), Positives = 432/695 (62%), Gaps = 27/695 (4%)
NCBI
Show Blast
YP_001735658.1 polyphosphate kinase [Synechococcus sp. PCC 7002]
Evalue: 3e-151 | Bitscore: 540
Identities = 314/706 (44%), Positives = 441/706 (62%), Gaps = 30/706 (4%)
NCBI
Show Blast
YP_001536052.1 polyphosphate kinase [Salinispora arenicola CNS-205]
Evalue: 5e-151 | Bitscore: 540
Identities = 316/729 (43%), Positives = 433/729 (59%), Gaps = 50/729 (7%)
NCBI
Show Blast

Gene Structure 

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Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
-
Structure Quality
2

Alternative Models  

n/a
 

CDS  

Locus ID
Bathy01g00500
Redo Blast
CDS Length
3009 nucleotides
CDS Sequence

Protein 

Locus ID
Bathy01g00500
Redo Blast
Protein Length
1003 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

View in GenomeView|View in Artemini


EST IDSuperContig_0.clus577.Contig1 Support ModelY More Info