util.parsers.embl
Class Embl_CDS_Data

java.lang.Object
  extended by util.parsers.embl.Embl_CDS_Data

public class Embl_CDS_Data
extends java.lang.Object


Constructor Summary
Embl_CDS_Data()
           
 
Method Summary
 java.util.List<java.lang.String> getBoundaries()
           
 int getCds_length()
           
 java.lang.String getName()
           
 int getNumExons()
           
 java.util.List<java.lang.Integer> getSplicesites()
           
 java.lang.String getStartCodon()
           
 java.lang.String getStopCodon()
           
 boolean isCorrectCDSLength()
           
 boolean isCorrectStartCodon()
           
 boolean isCorrectStopCodon()
           
 boolean isReverse()
           
 void setBoundaries(java.util.List<java.lang.String> boundaries)
           
 void setCds_length(int cds_length)
           
 void setCorrectCDSLength(boolean correctCDSLength)
           
 void setCorrectStartCodon(boolean correctStartCodon)
           
 void setCorrectStopCodon(boolean correctStopCodon)
           
 void setName(java.lang.String name)
           
 void setNumExons(int numExons)
           
 void setReverse(boolean reverse)
           
 void setSplicesites(java.util.List<java.lang.Integer> splicesites)
           
 void setStartCodon(java.lang.String startCodon)
           
 void setStopCodon(java.lang.String stopCodon)
           
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

Embl_CDS_Data

public Embl_CDS_Data()
Method Detail

getBoundaries

public java.util.List<java.lang.String> getBoundaries()

setBoundaries

public void setBoundaries(java.util.List<java.lang.String> boundaries)

getCds_length

public int getCds_length()

setCds_length

public void setCds_length(int cds_length)

isCorrectCDSLength

public boolean isCorrectCDSLength()

setCorrectCDSLength

public void setCorrectCDSLength(boolean correctCDSLength)

isCorrectStartCodon

public boolean isCorrectStartCodon()

setCorrectStartCodon

public void setCorrectStartCodon(boolean correctStartCodon)

isCorrectStopCodon

public boolean isCorrectStopCodon()

setCorrectStopCodon

public void setCorrectStopCodon(boolean correctStopCodon)

getName

public java.lang.String getName()

setName

public void setName(java.lang.String name)

getNumExons

public int getNumExons()

setNumExons

public void setNumExons(int numExons)

isReverse

public boolean isReverse()

setReverse

public void setReverse(boolean reverse)

getSplicesites

public java.util.List<java.lang.Integer> getSplicesites()

setSplicesites

public void setSplicesites(java.util.List<java.lang.Integer> splicesites)

getStartCodon

public java.lang.String getStartCodon()

setStartCodon

public void setStartCodon(java.lang.String startCodon)

getStopCodon

public java.lang.String getStopCodon()

setStopCodon

public void setStopCodon(java.lang.String stopCodon)