test
Class ExtractData

java.lang.Object
  extended by test.ExtractData

public class ExtractData
extends java.lang.Object


Field Summary
static int RANGE
           
 
Constructor Summary
ExtractData(java.lang.String[] args)
           
 
Method Summary
 void extractData(java.lang.String fileName, java.util.List<java.lang.Integer> exonCoords)
           
 java.util.List<java.lang.String> getCoords(java.lang.String name)
           
 java.lang.String getSequence(java.lang.String fileName)
           
static void main(java.lang.String[] args)
           
 void writeTrainingData(java.util.List<java.lang.String> data, java.lang.String name)
           
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

RANGE

public static final int RANGE
See Also:
Constant Field Values
Constructor Detail

ExtractData

public ExtractData(java.lang.String[] args)
Method Detail

main

public static void main(java.lang.String[] args)

getSequence

public java.lang.String getSequence(java.lang.String fileName)

extractData

public void extractData(java.lang.String fileName,
                        java.util.List<java.lang.Integer> exonCoords)

writeTrainingData

public void writeTrainingData(java.util.List<java.lang.String> data,
                              java.lang.String name)

getCoords

public java.util.List<java.lang.String> getCoords(java.lang.String name)