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R
randomSeedTipText()
- Method in class classifier.wekaSVM.
SMO
Returns the tip text for this property
RANGE
- Static variable in class test.
ExtractData
RangeOption
- Class in
var.experimenter
RangeOption(String, String)
- Constructor for class var.experimenter.
RangeOption
RangeOption.TYPE
- Enum in
var.experimenter
RangePanel
- Class in
var.experimenter
RangePanel(Dimension)
- Constructor for class var.experimenter.
RangePanel
readConfigurationFile(String)
- Static method in class var.experimenter.
ConfigurationFileReader
readData(String)
- Method in class util.parsers.fasta.
ExtractTrainingData
readFeatureFile(String, List<ValPosCombination>)
- Method in class util.featureSelection.
FeatureSelectionSupport
readFromFile(String)
- Static method in class var.experimenter.
ConfigurationFileReader
reading_frame
- Variable in class util.classificationFeatures.
AttributeDescription
remove()
- Method in class startup.gui.
SprSplashScreen
removeActionPanel(int)
- Method in class var.experimenter.
RangePanel
removeUpdate(DocumentEvent)
- Method in class startup.gui.
WizardFramework
retrieveStandardData(BufferedReader)
- Method in class var.
SimpleExperimenter
returnAllEvaluations()
- Method in class util.featureSelection.
AbstractAttributeEvaluation
returnSortedEvaluation()
- Method in class util.featureSelection.
AbstractAttributeEvaluation
Returns a list with combinations of values and their original positions within the list of evaluations.
returnUnsortedEvaluation()
- Method in class util.featureSelection.
AbstractAttributeEvaluation
reverse(ExtractTrainingData.AnnotationData)
- Method in class util.parsers.fasta.
ExtractTrainingData
reverseString(String)
- Method in class util.classificationFeatures.implementations.
BranchpointClassificationFeature
reverses the U2RNA string
reverseString(String)
- Method in class util.classificationFeatures.implementations.test.
IntronRetentionCompareClassificationFeature
RF2ClassificationFeature
- Class in
util.classificationFeatures.implementations.test
RF2ClassificationFeature()
- Constructor for class util.classificationFeatures.implementations.test.
RF2ClassificationFeature
RFClassificationFeature
- Class in
util.classificationFeatures.implementations
RFClassificationFeature()
- Constructor for class util.classificationFeatures.implementations.
RFClassificationFeature
RFClassificationFeatureDrawing
- Class in
util.classificationFeatures.implementations
RFClassificationFeatureDrawing(RFClassificationFeature)
- Constructor for class util.classificationFeatures.implementations.
RFClassificationFeatureDrawing
RocCurveData
- Class in
util
RocCurveData(String, int)
- Constructor for class util.
RocCurveData
rotateString(String)
- Method in class util.classificationFeatures.implementations.test.
NearestEqualClassificationFeature
run()
- Method in class main.
FunSiP
Method necessary to launch FunSiP as a different thread.
run()
- Method in class startup.
ClassificationAction
Starts the dataflow in a asymptotic thread way.
run()
- Method in class startup.cluster.
ClusterClassificationAction
Implementation of the run()-method of the Runnable interface.
run()
- Method in class startup.features.
FeatureRecognition
run()
- Method in class startup.
FunSiPWorkflow
Inherited because the workflow must be run as a thread.
run()
- Method in class startup.gui.
SprOutputEditorWriter
run()
- Method in class startup.gui.
SprSplashScreen
RUN_FROM_JAR
- Static variable in class main.
FunSiPJar
Accesible boolean indicating whether or not the program is running as a jar-file.
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