Results: Clustering

Results: RICEPROM_protein_DNA_twist_10_771444

Input Parameters:

Required probability of genes belonging to cluster: 0.99
Minimal number of genes in cluster: 100
Total number of genes in data set: 2205
Selected organism: other

Results:

Number of clusters: 7

Remark: The plots are generated using the normalised input data which are used during the processing.

Cluster 1

Identifiers

AK065108.1

AK105320.1

AK101789.1

AK106899.1

AK101731.1

AK103513.1

AK100580.1

AK110650.1

AK107098.1

AK101978.1

AK109599.1

AK103084.1

AK107465.1

AK111470.1

AK109810.1

AK107636.1

AK065406.1

AK098954.1

AK111463.1

AK106772.1

AK103869.1

AK108006.1

AK105890.1

AK072096.1

AK070060.1

AK062989.1

AK070950.1

AK107690.1

AK107818.1

AK105938.1

AK099324.1

AK069627.1

AK061207.1

AK071727.1

AK108467.1

AK067863.1

AK058497.1

AK109465.1

AK104101.1

AK109211.1

AK106180.1

AK067783.1

AK069369.1

AK108852.1

AK101510.1

AK105371.1

AK105273.1

AK066524.1

AK104464.1

AK109476.1

AK111402.1

AK106093.1

AK098969.1

AK070424.1

AK073556.1

AK109313.1

AK109215.1

AK058810.1

AK107858.1

AK106878.1

AF306651

AK061443.1

AK061149.1

AK107720.1

AK107371.1

AK070239.1

AK107077.1

AK106813.1

AK103953.1

AK058799.1

AK102973.1

AK062256.1

AK109219.1

AK110967.1

AK106130.1

AK065232.1

AK072522.1

AK069191.1

AK072849.1

AK109785.1

AK100367.1

AK108184.1

AK064129.1

AK111380.1

AK100654.1

AK062463.1

AK101750.1

AK067025.1

AK071030.1

AK102527.1

AK108660.1

AK107637.1

AK109902.1

AK099332.1

AK062590.1

AK109553.1

AK099307.1

AK111007.1

AK100676.1

AK064169.1

AK105183.1

AK104356.1

AK066263.1

AK106955.1

AK071593.1

AK109484.1

AK106679.1

AK069908.1

AK061219.1

AK073197.1

AY344485

AK105910.1

AK105292.1

AY344491

AK105463.1

OSOSA2

AK106461.1

AK106363.1

AK070156.1

AK105481.1

AK072109.1

AK102422.1

AK105725.1

AK110939.1

AK073771.1

AK101093.1

AK110688.1

AY017415

AK070069.1

AY339378

AK107372.1

AK103838.1

AK068779.1

AK102531.1

AK107347.1

AK101101.1

AK101722.1

AK105583.1

AK111272.1

AK108984.1

AK102077.1

AK109630.1

AK107554.1

AK103540.1

AK068750.1

AK064794.1

AK102437.1

AK065792.1

AK066649.1

AK103435.1

AK072730.1

AK108349.1

AK069821.1

AK109797.1

AK068899.1

AK107565.1

AK110914.1

AK060944.1

AK067135.1

AK107925.1

AK099039.1

AK107576.1

AY345224

AK102539.1

AK107845.1

AK102484.1

AK106091.1

OSBTUBULI

AK111378.1

AK062755.1

AK072825.1

AK106956.1

AK107235.1

AK107954.1

AK107758.1

AK106778.1

AK066722.1

AK108872.1

AK106992.1

AK100409.1

AK070531.1

AK061263.1

AK106542.1

AK107075.1

AK069404.1

AK105562.1

AK067796.1

AK108767.1

AK106887.1

AK064330.1

AK068711.1

AK108785.1

AK104746.1

AK102612.1

AK108622.1

AK107896.1

AK106989.1

AK101625.1

AK107014.1

AK111371.1

AK066835.1

AK110911.1

AK065855.1

AK067680.1

AK111266.1

AK070760.1

AK073173.1

AK070310.1

AK060215.1

AK100852.1

AK067477.1

AK071188.1

AK062189.1

AK108041.1

AK110744.1

AK069448.1

AK104975.1

AK106405.1

AK107501.1

AK108132.1

AK111368.1

AK109580.1

AK099334.1

AK066156.1

AK100856.1

AK107170.1

AY030360

AK110675.1

AK061758.1

OSKETHA

OSIMPB2

AK101146.1

AK062749.1

AK109388.1

AK103044.1

AK101785.1

AK105349.1

AK107149.1

AK103135.1

AK107516.1

AK109414.1

AK111343.1

Cluster 2

Identifiers

AK099734.1

AK058733.1

AK101462.1

AK103865.1

AK068381.1

AK064847.1

AK072416.1

AK106841.1

AK107178.1

AK058457.1

AK107897.1

AK104511.1

AK064440.1

AK070903.1

AK067899.1

AK111354.1

AK102551.1

AK100123.1

AK100744.1

AK100835.1

AK109087.1

AK069438.1

AK105513.1

AK110629.1

AK104010.1

AK110770.1

AK073534.1

AK100127.1

AK111474.1

AK073185.1

AK106685.1

AK106308.1

AK073527.1

AK072220.1

AK106057.1

AK107970.1

AK062691.1

AK106892.1

AK106794.1

AK062314.1

AK105713.1

AK060336.1

AK061432.1

AK060183.1

AK100777.1

OST151

AK106885.1

AK099444.1

OSALCDE2

AK108413.1

AK104359.1

AK099615.1

AK070344.1

AK109389.1

AK106101.1

AK106624.1

AK102686.1

AK063218.1

AK108344.1

AK102450.1

AK108515.1

AK104559.1

AK111075.1

AK103873.1

AK101797.1

AK064953.1

OS30477

AK059194.1

OSGTPBP

AK072148.1

AK101732.1

AK109451.1

AK062616.1

AK058752.1

AK072010.1

AK107212.1

AK105953.1

AK106584.1

AK109789.1

AK102741.1

AK107851.1

AK107009.1

AK108203.1

AK108007.1

AK101387.1

AK061160.1

AK064714.1

AK065247.1

AK104788.1

OSAB2820

AK108719.1

OSU65956

AK110862.1

AK108657.1

AK068586.1

AK060515.1

AK106229.1

AK110332.1

AK108773.1

AY344483

OSA238318

AK060159.1

AK072657.1

OSAF1396

AK108261.1

AK063208.1

AK069512.1

AK103071.1

AK102963.1

AK063847.1

AK110630.1

AY164896

AK061811.1

AK100651.1

AK071238.1

AK106716.1

AK102182.1

AK111058.1

AK105932.1

AK101976.1

AK111327.1

AK072352.1

AK108265.1

AK101994.1

AK108632.1

AF543419

AK107609.1

AK108803.1

AK102869.1

AK105845.1

AK111011.1

AK111338.1

AK101580.1

AK105144.1

AK064344.1

AK108570.1

AK106818.1

AK070033.1

AK072632.1

AK107492.1

AK107140.1

AK103282.1

AK072803.1

AK071652.1

AK107369.1

AK108905.1

AF241166

AK104077.1

AK106774.1

AK068558.1

AK100757.1

AK063619.1

OSAB801

AK099271.1

AK110420.1

AK106589.1

AK111320.1

AK100793.1

AY100689

AK107431.1

OSA18348

AK061695.1

AK072763.1

AK062766.1

AK109126.1

AK107246.1

AK106095.1

AK109413.1

AK099366.1

AK108531.1

AK103072.1

AK104942.1

AK072694.1

AK069335.1

AK058609.1

AK073398.1

AK106840.1

AK104862.1

OSPROL7A

AK101650.1

AK111353.1

AK070455.1

OSAAMYB

AK108713.1

AK110798.1

AK073155.1

AK107708.1

AK073972.1

AK102641.1

AK063623.1

AK109900.1

AK109820.1

AK066170.1

AK108491.1

AK062385.1

AK103977.1

AK068719.1

AK102449.1

AK108680.1

AK108386.1

AK111310.1

AK105345.1

AK105516.1

AK107497.1

AK107399.1

AK102558.1

AK107163.1

AK071127.1

AK105356.1

AK066803.1

AK111412.1

AK063943.1

AK109559.1

AK107174.1

AK106445.1

AK102235.1

AK070801.1

AK107541.1

AK110679.1

OS37936

AK063881.1

AK068697.1

OSA272394

AK108688.1

Cluster 3

Identifiers

AK061348.1

AK104747.1

AK106670.1

AY224503

AK066999.1

AK099476.1

AK106467.1

AK102101.1

AK067140.1

OS19030

AK066135.1

AK107654.1

AK106827.1

AK106576.1

AK105073.1

AK100036.1

AK063562.1

AK109897.1

AK103902.1

AK071051.1

AK110690.1

AK108060.1

AK059862.1

AK073570.1

AK073276.1

AK109385.1

AK100588.1

AK110952.1

AK065373.1

AK108576.1

AK099426.1

AK100370.1

AK106435.1

AK067319.1

AK102127.1

AK101343.1

AK074006.1

AK101866.1

AK067435.1

AK101612.1

AK100803.1

AK110778.1

AK067079.1

AK069326.1

AK101100.1

AK106831.1

AK107364.1

AK105459.1

AK106032.1

AK060296.1

AK109426.1

AK105412.1

AK109640.1

AK062187.1

AK072878.1

AK104076.1

AK100836.1

AK108475.1

AF300971

AK103554.1

AK070497.1

AK103841.1

AK069410.1

AK069018.1

AK111410.1

AK107252.1

AK101838.1

AK064376.1

AK071488.1

AK062587.1

AK101990.1

AK110964.1

AK109659.1

AK107329.1

AK100088.1

AK107176.1

AK108370.1

AK067995.1

AK099997.1

AK072857.1

D87547

OSA495797

AK068714.1

AK105827.1

AK102894.1

AK110561.1

AK108381.1

AK060199.1

AK069461.1

AK101268.1

AK109605.1

AK071463.1

AK101708.1

AK109623.1

AK110979.1

AK102978.1

AK099144.1

AK100070.1

AK109169.1

AK111465.1

AK063571.1

AK109707.1

OSU55873

OSGA3

AK072294.1

AK104713.1

AK107126.1

AK069556.1

AK065894.1

AK059305.1

AK065346.1

AK111302.1

AK105264.1

AK110943.1

AK106883.1

AK103726.1

AK098985.1

AK101047.1

AK111411.1

AK101218.1

AK066159.1

AK109402.1

AK070182.1

AK105366.1

AK109918.1

AK110990.1

AK104655.1

AK065833.1

AK106902.1

AK059443.1

OSD12777

AK107282.1

AK105671.1

AK107994.1

AK071435.1

AK059799.1

AK108012.1

AK103523.1

AK105828.1

AK102543.1

AK100467.1

AK105871.1

AK106728.1

AK061394.1

AK063968.1

AK073787.1

AK071032.1

AK100478.1

AK099919.1

AK103650.1

OSCYSPRO

AK108989.1

AK070070.1

AK101916.1

AK110933.1

AK105327.1

AK105229.1

AK109384.1

AK073994.1

AK101411.1

AK065002.1

AK068559.1

AK108379.1

AK073904.1

AK108960.1

AK064538.1

AK107588.1

AK058867.1

AK105879.1

AK106256.1

AK067336.1

AK108659.1

AK105447.1

AK104140.1

AK103215.1

AK070630.1

AK072118.1

AK106347.1

OSGAMYB

AK099897.1

AK102504.1

AK107192.1

AK064836.1

AK059992.1

AK103153.1

AK104108.1

AK063155.1

Cluster 4

Identifiers

AK103945.1	OSA270955	AK099709.1	AK073497.1	AK110901.1	AK109156.1	AK111409.1	AK104936.1	AK073334.1	AK111176.1	OS33283
AK105404.1	AK109901.1	AK109723.1	AK100152.1	AK101150.1	AK108565.1	AY341826	AK104275.1	AY341859	OSHOX1	AK111289.1
AK066077.1	AK105560.1	AK108594.1	AK103753.1	AK109411.1	AK100614.1	AK069315.1	AK101263.1	AK106446.1	AK106348.1	AK064764.1
AK108598.1	AK105680.1	AK104755.1	AK111093.1	AK064579.1	AK100538.1	AK068902.1	AK105070.1	AK106548.1	AK108642.1	AK107913.1
AK104352.1	AK111268.1	AK109608.1	AK068132.1	AK071760.1	AK102385.1	AK099129.1	AK072904.1	AK101151.1	AK107405.1	AK066703.1
AK100360.1	AK110880.1	AK103761.1	AK070138.1	AK072639.1	AK108846.1	AK111403.1	AF198626	AK067795.1	AK071601.1	AK103950.1
AY345599	AK060813.1	AK073648.1	AK107975.1	AK108254.1	AK105816.1	AK102237.1	AK108541.1	AK108810.1	AY028315
AK106287.1	AK109859.1	AK105692.1	AK073964.1	AK068921.1	AK106763.1	E14790	AK058495.1	AK111022.1	AK106233.1
OSGPROTBS	AK107852.1	AK063528.1	AK062025.1	AK109202.1	AK070683.1	AK067749.1	AK110053.1	AK103580.1	AK061350.1
AK105282.1	AK109213.1	AK069240.1	AK100092.1	AK061499.1	AK103141.1	AK071758.1	AK110620.1	AK070778.1	AK062505.1
AK099813.1	AB077993	D87261	AK111317.1	AK105123.1	AK102361.1	AK111335.1	AK073242.1	AK105141.1	AK063710.1
AK100358.1	AK065299.1	AK110820.1	AK105116.1	AK108248.1	AK102623.1	AK058296.1	AK070491.1	AK107105.1	AK064621.1
AK105846.1	AK104147.1	AK111437.1	AK104514.1	AK111357.1	AK111259.1	AK073264.1	AK071203.1	AK106430.1	AK073101.1
AK111295.1	AK059469.1	AK072644.1	AK099432.1	AK105370.1	AK102311.1	AK103661.1	AK070307.1	AK106532.1	AK061678.1
AK107759.1	AK099534.1	AK058526.1	AK107966.1	AK109047.1	AK103055.1	AK108165.1	AK065387.1	AK099465.1	AK073054.1

Cluster 5

Identifiers

AK071094.1	AK107527.1	AK107374.1	AK061635.1	AK109425.1	AK103785.1	AK069975.1	AK104333.1	AK102820.1
AK101023.1	AK064328.1	AK107727.1	AK060118.1	OSBZIPPA	AK071832.1	AK108670.1	AK101303.1	AK109196.1
AK107738.1	AK065983.1	AK102744.1	AY341847	AK102817.1	AK067929.1	AK069852.1	AK103484.1	AK069478.1
AK106264.1	AK059270.1	AK065904.1	AK099266.1	AK059434.1	AK109422.1	AK111057.1	AK070820.1	AK068248.1
AK067482.1	AK101365.1	AK103049.1	AK061196.1	AK111428.1	OSA250311	AK061008.1	AK066935.1	AK101296.1
AK106828.1	AK105677.1	AK103518.1	AK102581.1	AK104069.1	AK102727.1	AK110960.1	AK100219.1
AK109753.1	AK066158.1	AK064220.1	AK067254.1	AK066176.1	AK098995.1	AK110971.1	AK065367.1
AK100560.1	AK109855.1	AK099187.1	AK107525.1	AK072937.1	AK061731.1	AK105638.1	AK109710.1
AK069149.1	AK070716.1	AK106320.1	AK109176.1	AK101301.1	AK066046.1	AK100648.1	U95135
AK109536.1	AK067909.1	AK109089.1	AK066874.1	AK101330.1	AK111033.1	AK103032.1	AK109198.1
AK109932.1	AK073474.1	AK108792.1	AK101229.1	AK104924.1	AK109838.1	OSA311053	AK072048.1
AK102507.1	AK100529.1	AY044444	AK101200.1	AK069949.1	AK108364.1	AK102895.1	AK110987.1
AK102910.1	AK103149.1	AK105919.1	AK111088.1	AK068475.1	AK103607.1	AK110998.1	AK062654.1
AK073551.1	AK072724.1	AK065238.1	OSPDECOOH	AK068330.1	AK101738.1	AK100954.1	AK107919.1
AK108648.1	AK073889.1	OSAF1505	AK106067.1	AK069942.1	AK111488.1	AK071530.1	AK069677.1

Cluster 6

Identifiers

AK073577.1	AK100464.1	AK107258.1	AK059364.1	AK063515.1	AK108020.1	AK065144.1	AK108013.1
AK105306.1	AK111390.1	AK103077.1	AK101368.1	AK100388.1	OSPEROX	AK111300.1	AK099317.1
AK105353.1	AK109538.1	AK105622.1	AK062942.1	AK063025.1	AK106606.1	AK106159.1	AK058821.1
AK105735.1	AK109589.1	AK109604.1	AK099230.1	AK102788.1	AK058556.1	AK109273.1	AK107295.1
AK098864.1	AK073506.1	AK066880.1	AK066684.1	AK106207.1	AK070817.1	AK101638.1	AK104966.1
AK108025.1	AK069628.1	AK102008.1	AK104381.1	AK072203.1	AK064456.1	AK107757.1	AK105721.1
AK110739.1	AK064823.1	AK073375.1	AK060191.1	OSU25284	OSA18624	AK100992.1	AK106258.1
AK066285.1	AK104142.1	AK066474.1	AK071434.1	AK100913.1	AK111436.1	AK070538.1	AK105217.1
AK108490.1	AK099594.1	AK109910.1	AK066838.1	AK106872.1	AK108302.1	AK068035.1
AK106749.1	AK101919.1	AK102648.1	AK109231.1	AK058877.1	AK108415.1	AK106633.1
AK107337.1	AK067186.1	AK100187.1	AK107446.1	AK106466.1	AK070996.1	AK065503.1
OSAF5492	AK104695.1	AK108197.1	AK102979.1	AK066090.1	AK101026.1	AK106136.1
AK106503.1	AK100413.1	AK062320.1	AK110639.1	AK069833.1	AK063024.1	AK066621.1
AK064912.1	AK072808.1	AK102206.1	AK072150.1	AB089272	AK109780.1	AK109682.1
AF402797	AK106292.1	AK106518.1	AK105269.1	AK072782.1	OSRBOHA	OSU95968

Cluster 7

Identifiers

AK073479.1	AK105999.1	AK108452.1	AK111085.1	AK109534.1	AK110636.1	AK107672.1	AK107574.1
AK107026.1	AK099171.1	AK073552.1	AK109269.1	AK109807.1	AF432204	AK069809.1	AK107847.1
AK105608.1	AK072729.1	AK104301.1	AK063501.1	AK110858.1	AK111333.1	AK111406.1	AK102955.1
AK110328.1	AK058570.1	AK065410.1	AK067464.1	AK102868.1	AK063948.1	AK105397.1	AK104530.1
AK102120.1	AK105154.1	AK071041.1	AK071906.1	AK107045.1	AK101126.1	AK103743.1	AK072908.1
AK105536.1	AK108610.1	AK110793.1	AK068605.1	AK105663.1	AK109238.1	AK105649.1	AK104611.1
AK111283.1	AK101555.1	AK072509.1	AK108015.1	OSU92541	AK106306.1	AK103275.1	AK108727.1
AK110852.1	AK068402.1	AK106963.1	AK106865.1	AK099947.1	AK105983.1	AK109547.1
AK100423.1	AK099711.1	AK070865.1	AK067506.1	AK107972.1	AK111487.1	AK105715.1
AK103639.1	AK109772.1	AK062937.1	AK103061.1	AK102234.1	AK099471.1	AK111422.1
AK105708.1	AK102946.1	OSA311051	AK069800.1	AK105664.1	AK108346.1	AK110896.1
AK061300.1	AK106034.1	AK099214.1	AK108902.1	AK064523.1	AK067034.1	AK061467.1
AK107123.1	AK100827.1	AK063463.1	AK065318.1	AK107214.1	AK107232.1	AK103799.1
AK059836.1	AK100333.1	AK099679.1	AK065463.1	AK108314.1	AK100540.1	AK065707.1
AK106452.1	AK106877.1	AK058380.1	AK104213.1	AK107534.1	AK067888.1	AK064502.1

If you use these results please cite the following paper:
De Smet F., Mathys J., Marchal K., Thijs G., De Moor B. & Moreau Y. 2002. Adaptive Quality-based clustering of gene expression profiles, Bioinformatics, 18(6), 735-746.

This page is automatically generated by the adaptive quality-based clustering software.
Email: gert.thijs@esat.kuleuven.ac.be