At5g28080.1 68412.m03086 protein kinase family
Matching miRNAs:
| miRNA name | IGR name | mature miRNA sequence | Targets | Rfam | |
|---|---|---|---|---|---|
| 1 | prec1402 | igr140#chr1#x1=582220#l=2039_509+594 | CTTCATCTTCATCATCATCAG | 76 | |
| 2 | prec1406 | igr140#chr1#x1=582220#l=2039_509+583 | CTTCATCTTCATCATCATCAG | 76 | |
| 3 | prec1410 | igr140#chr1#x1=582220#l=2039_509+589 | CTTCATCTTCATCATCATCAG | 76 | |
| 4 | prec1414 | igr140#chr1#x1=582220#l=2039_509+586 | CTTCATCTTCATCATCATCAG | 76 |
Gene Sequence:
AUGAAGUUCU ACGCUUCUUG GGUCGAUACC GAUAAUCGAA ACAUCAACUU UGUCACUGAA 60 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AUGUUCACUU CUGGCACCUU GAGACAGUAU AGGCUAAAAC AUAAGAGAGU GAACAUAAGA 120 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GCGGUAAAGA AUUGGUGUAG ACAGAUUUUA AGAGGAUUAA ACUAUCUUCA UACACAUGAC 180 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CCUCCUGUGA UUCAUAGAGA UCUCAAGUGU GACAACAUUU UUAUAAAUGG GAACCAAGGA 240 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GAAGUCAAGA UUGGAGAUCU UGGUCUUGCU GCUUGUUUAC AACACUCUCA CGCUGCUCAU 300 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UGUGUUGGCA CACCAGAGUU CAUGGCUCCU GAAGUUUAUA AAGAAGAAUA UAACCAAUUA 360 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GUCGAUAUUU ACUCGUUCGG UAUGUGUGUU UUGGAAAUGG UAACGUUUGA UUACCCGUAU 420 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AGUGAGUGUU CUCACCCUGC UCAGAUUUAC AAGAGAGUUA UAUCGGGCAA GAAACCAGAU 480 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GGAUUAGACA AAGUGAAGGA UCCAGAGGUU AGAGGGUUUA UCGAGAAGUG UUUGGCCACA 540 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GUGUCCCUUA GACUCUCUGC UUGUGAACUA CUAGAUGACC AUUUUCUUUG UAUCGAUGAA 600 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UCGGAUAUGA GACGCGUAGA GAGCGAAAAG GGCUUGAUAG AUGAAGCAGG GACUCCUCUU 660 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AGACAUUCUU AUCAUAUACC UCACUACUCA AACGGUUACU ACAGCCUCUA UAAUCAAAAC 720 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CAAUGGGAUU ACAAUGGAGA UGAGACAGUG GAGUCACACG AGAUAGAUCU CUUGGAGUUU 780 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CAAAAUGAUG AUGAUGAAGA AGAAGAAGAU AAGAGGUUUG GUAGUGUAGA UAUAAGCAUU 840 ....****** ********** *****..... .......... .......... .......... prec1402 ....****** ********** *****..... .......... .......... .......... prec1406 ....****** ********** *****..... .......... .......... .......... prec1410 ....****** ********** *****..... .......... .......... .......... prec1414 AAAGGGAAGA GAAGAGACAA UGGAGAUGGA CUAUUUCUGC GACUCAAAAC CGUCAACAAG 900 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GAAGGUUGUG UGAGAAACAU AUACUUCCCG UUCGACAUCG AGACUGACAC AGCAAUAAGC 960 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GUUGCAAGAG AGAUGGUGGA AGAGCUGGAG AUGGAUGACC GUGAUGUCAC AAAGAUAGCU 1020 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AAUAUGAUCG AUGGAGAGAU UGCUUCUUUG GUUCCUAAUU GGAGUAUCUU CUGCAGCUCC 1080 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GAAUCGAACC GUUCCUCGGU GGGUUCAGUC AUGGAUUUCA AUGAGAUGCA GUGUGGAAGA 1140 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GACGGGUGUG AAGAGAAGCA UGGACGGUUU GAGGAGAUUA CGUUUGAGAU AACAGUAAAC 1200 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GACUCUGACG AAGAAGACUA Guuuucuugu gcggcaagua augugauaca cuagcuauau 1260 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 ggaucuaaaa ccuuucucuu uguccauagu cuuauguuaa cacuauugau cauugggaau 1320 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 gugguucaca aacagaugaa uaauuccauu acuaaccguu agcaucug 1368 .......... .......... .......... .......... ........ prec1402 .......... .......... .......... .......... ........ prec1406 .......... .......... .......... .......... ........ prec1410 .......... .......... .......... .......... ........ prec1414