At4g34100.1 68411.m04400 zinc finger (C3HC4-type RING finger) protein family
Matching miRNAs:
| miRNA name | IGR name | mature miRNA sequence | Targets | Rfam | |
|---|---|---|---|---|---|
| 1 | prec1402 | igr140#chr1#x1=582220#l=2039_509+594 | CTTCATCTTCATCATCATCAG | 76 | |
| 2 | prec1406 | igr140#chr1#x1=582220#l=2039_509+583 | CTTCATCTTCATCATCATCAG | 76 | |
| 3 | prec1410 | igr140#chr1#x1=582220#l=2039_509+589 | CTTCATCTTCATCATCATCAG | 76 | |
| 4 | prec1414 | igr140#chr1#x1=582220#l=2039_509+586 | CTTCATCTTCATCATCATCAG | 76 |
Gene Sequence:
AUGGAGAUUU CCCCGGCCGA UUCGUUGUCC AUCUCUGGCG CGGCUGCUUC UGAGGUCGUC 60 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UCCGAGCCUU CCGUAUCUUC UUCUUCUUCC UCUUCCUCGC CGAAUCAGGC AUCACCCAAU 120 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CCUUUCUCAA ACAUGGAUCC UGCAGUUUCG ACGGCGACAG GAUCGAGGUA CGUUGAUGAU 180 .......... .......... .......... .......... .......... ..******** prec1402 .......... .......... .......... .......... .......... ..******** prec1406 .......... .......... .......... .......... .......... ..******** prec1410 .......... .......... .......... .......... .......... ..******** prec1414 GACGAAGAUG AAGAGGACGU UUGCAGGAUC UGCAGAAAUC CUGGUGAUGC AGACAAUCCG 240 ********** ***....... .......... .......... .......... .......... prec1402 ********** ***....... .......... .......... .......... .......... prec1406 ********** ***....... .......... .......... .......... .......... prec1410 ********** ***....... .......... .......... .......... .......... prec1414 CUUCGGUAUC CGUGUGCCUG UAGCGGAAGU AUCAAAUUUG UUCACCAGGA UUGUCUCCUU 300 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CAGUGGCUUA AUCACAGCAA CGCUCGUCAA UGCGAGGUUU GCAAGCAUCC UUUUUCAUUC 360 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UCCCCAGUAU AUGCUGACAA UGCUCCGUCA AGGCUCCCUU UCCAGGAGUU UGUAGUUGGC 420 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AUUGCUAUGA AAGCUUGCCA UGUUUUACAG UUCUUUCUGC GGUUGAGUUU UGUGCUUUCU 480 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GUCUGGCUUC UCACUAUACC UUUCAUUACA UUUUGGAUAU GGCGUUUGGC UUUCGUGCGA 540 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 ACUUUUGGUG AAGCUCAAAG GUUGUUCUUA AGCCACAUCU CCACCACAGU AAUUCUCACU 600 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GAUUGCUUGC AUGGGUUCUU ACUAUCUGCA AGUAUUGUCU UCAUCUUCCU UGGAGCUACU 660 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UCAUUAAGGG ACUACUUUAG GCACUUACGA GAGCUUGGGG GACAAGAAGA GAGAGAUGAU 720 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GAUGUGGACA GAAAUGGUGC UCGUGCUGCA AGAAGACCUG CUGGACAGGC UAAUAGGAAU 780 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CUUGCUGGAG AGGGGAAUGG UGAAGAUGCU GGGGAUCAGG GUGCUGCGGU UGGUCAGAUU 840 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GCUAGAAGGA AUCCUGAAAA UGUUCUGGCA AGGUUGGACA UACAAGCAGC UCGUCUUGAG 900 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GCUCAGGUUG AACAGAUGUU UGAUGGGUUG GAUGACGCUG AUGGUGCAGA AGACGUUCCA 960 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UUUGAUGAGC UGGUUGGAAU GCAAGGUCCA GUGUUUCAUU UGGUUGAGAA UGCCUUUACU 1020 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GUUCUAGCAA GCAAUAUGAU AUUCCUUGGU GUUGUUAUCU UCGUGCCCUU UACCUUGGGA 1080 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CGGAUUAUAU UGUAUCACGU GUCAUGGCUU UUUGCUGCUG CUAGAGGCCC UGCUGUGGCU 1140 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GCAUCAUUGC AUCUUACAGA UACCGGACUC UCAUUGGAAA AUAUUACUCU GAAGAGUGCG 1200 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CUGACUGCUG UCUCGAAUUU GACUAGCGAG GGCCAAGGAA AUGGGCUGCU UGGUCAGCUC 1260 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 ACUGAAAUGA UGAAAGUCAA CGGAAGUGAA UUGAAUGGAG CAAACAAUAC GCUAUCAGUU 1320 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GCUACUGAUC UCCUGAAAGG UUCUACUGUU GGGGCCUCAA AGCUUUCUGA UAUUACAACU 1380 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CUGGCUGUUG GGUACAUGUU UAUCGUAUUU CUGGUGUUCC UUUACCUUGG GAUCAUUGCA 1440 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CUGAUUCGAU AUGCCAAGGA AGCUGUACCA UCCCUCCUUA GACAGUUCUU GGCAGCAAUG 1500 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AGGCAUCUGA UGACCAUGAU CAAAGUUGCC UUUCUUUUGG UCAUCGAGCU UGGGGUCUUU 1560 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CCUCUGAUGU GUGGUUGGUG GCUAGAUGUU UGCACUGUUA GGAUGUUCGG UAAAACAAUG 1620 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UCCCACAGGG UACAGUUUUU AUCAAUUUCU CCUCUGGCAA GCUCACUUGU UCAUUGGGUU 1680 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GUUGGAAUCA UGUACAUGUU GCAAAUAAGC AUCUUCGUCA GCCUUCUUCG AGGGGUUCUU 1740 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CGUCCUGGAG UUCUGUAUUU CCUUCGUGAU CCAGCAGAUC CUAAUUACAA UCCAUUCCGA 1800 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GAUUUGAUUG AUGAUCCAGU GCACAAGCAU GCUCGGAGGG UACUGUUAUC AGUUGCAGUG 1860 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UAUGGAAGUU UGAUUGUGAU GCUGGUAUUU UUACCAGUCA AACUUGCGAU CCGGAUGGCU 1920 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CCUUCAAUCU UUCCACUUGA CAUAUCUGUA UCCGACCCAU UCACUGAGAU UCCCGCCGAC 1980 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AUGCUUCUGU UUCAAAUAUG CAUUCCAUUU AUCAUCGAGC AUUUCAGACU UCGGACCACA 2040 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AUUAAGUCCC UUCUACGCUG CUGGUUCACU GGGGUUGGUU GGGCGCUUGG UUUAACAGAC 2100 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UUCCUCUUGC CAAGACCAGA AGACAACAUU GGUCAGGACA AUGGAAAUGG UGAACCAGGA 2160 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AGGCAGAACA GAGCACAAGU GUUGCAGGUC GGAGGACCUG ACAGGGCCAU GGCUGCGCUU 2220 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CCAGUAGCUG AUGACCCUAA CAGAAGUCGC CUCCGUGCUG GGAAUGUCAA CACGGGUGAG 2280 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GAAUAUGAAG AUGAUGACGA ACAAUCUGAU UCUGACAGGU ACAACUUUGU GGUCCGGAUA 2340 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AUUCUCCUUC UACUUGUUGC AUGGGUGACU CUUCUUCUCU UCAAUUCAGC AUUGAUAGUU 2400 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GUGCCAGUUU CGCUGGGACG UGCUCUAUUC AGUGCCAUUC CCAUUCUUCC AAUAACUCAU 2460 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GGCAUCAAGU GCAAUGAUCU GUAUGCUUUC GUCAUUGGCA CAUAUGCCUU UUGGACUACC 2520 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AUAUCUGGGG CCAGGUAUGC UAUCGAGCAU GUCAAGUCAA AGAGGACUUC AGUCUUGCUU 2580 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AACCAAAUAU GGAAAUGGUG UGGGAUUGUA UUCAAGAGCU CGGUGCUGUU AGCCAUAUGG 2640 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GUUUUUAUCA UUCCGGUGCU AAUUGGACUU CUGUUUGAGC UUUUGGUGAU UGUCCCAAUG 2700 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AGAGUCCCAG UUGAUGAAAG CCCUGUGUUC CUCCUGUAUC AAGACUGGGC UCUUGGGCUC 2760 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AUCUUUUUGA AAAUCUGGAC UAGACUGGUA AUGCUGGAUC AUAUGCUUCC AAUAGUGGAU 2820 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GAUAGCUGGA GAGCAAAGUU UGAGCGGGUA AGAGAAGAUG GCUUCUCGAG GCUUCAAGGG 2880 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UUAUGGGUAC UUAGAGAGAU UGUGUUCCCG AUCGUCAUGA AACUCCUAAC GGCUUUAUGC 2940 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GUGCCUUAUG UGUUGGCAAG AGGAGUGUUC CCAAUGCUCG GAUAUCCGCU UGUUGUGAAC 3000 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UCAGCGGUCU ACAGAUUCGC GUGGAUAGGU UGUCUUUCAG UGAGCCUCUU CUGCUUCUGU 3060 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GCAAAAAGAU GCCAUGUCUG GUUUAGAAAC CUUCACAACU CUAUCCGUGA UGACCGUUAU 3120 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CUCAUUGGUC GGAGACUGCA UAACUUUGGG GAAGCUGCUU UAGCUAAUCA AAACCAAAAC 3180 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CAAAGUAGUG AGGAUGCAGG AGAUGGUGUC UUGAUAGGAC GAGAGGGAGA UGUUGAUAAU 3240 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GGACUUAGGC UCAGACGUGC AAUCCAACAA GAAGCUUAG 3279 .......... .......... .......... ......... prec1402 .......... .......... .......... ......... prec1406 .......... .......... .......... ......... prec1410 .......... .......... .......... ......... prec1414