At4g30080.1 68411.m03904 transcription factor-related protein
Matching miRNAs:
| miRNA name | IGR name | mature miRNA sequence | Targets | Rfam | |
|---|---|---|---|---|---|
| 1 | prec11509 | igr3768#chr5#x1=18615936#l=2646_1330-1414 | TATGCCTGGCTCCCTGTATGCCAC | 2 | ath-MIR160c |
| 2 | prec11519 | igr3768#chr5#x1=18615936#l=2646_1330-1414 | TATGCCTGGCTCCCTGTATGCC | 3 | ath-MIR160c |
| 3 | prec2086 | igr1679#chr4#x1=8848676#l=7609_5318+5398 | TGCCTGGCTCCCTGTATGCC | 3 | ath-MIR160b |
Gene Sequence:
gugcaaaaag uguaaccuuc cuuauccgau ucugaagcag aaauuagcug cagaaucuuc 60 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 agauucucuc uauaccuaga uugguuuuuc acagaaucuu cgcuauuuug uucagaucug 120 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 ccacuguuuc agcaaaaacg gucacaaaaa auAUGAUAAA UGUGAUGAAU CCAAUGAAAG 180 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 GUGGAACAGA GAAAGGUUUA GAUCCUCAGC UAUGGCAUGC AUGUGCUGGU GGUAUGGUUC 240 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 GUAUGCCUCC UAUGAACUCU AAAGUCUUUU ACUUUCCUCA AGGUCACGCC GAAAACGCUU 300 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 ACGAUUGUGU CGAUUUCGGU AAUCUCCCUA UUCCUCCCAU GGUUUUGUGU CGUGUUUUAG 360 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 CCAUUAAGUA UAUGGCUGAU GCUGAAUCUG ACGAGGUUUU CGCUAAACUG AGAUUGAUUC 420 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 CUUUGAAAGA UGAUGAGUAU GUUGAUCACG AGUAUGGUGA UGGUGAAGAU AGUAACGGUU 480 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 UCGAGAGUAA UAGUGAGAAA ACGCCUUCGU UUGCUAAGAC UUUGACUCAG UCUGAUGCUA 540 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 AUAACGGUGG GGGUUUCUCU GUUCCUCGUU AUUGCGCUGA GACGAUUUUC CCGAGGUUGG 600 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 AUUAUAACGC CGAGCCGCCG GUUCAGACCA UUCUUGCUAA GGAUGUUCAU GGUGAUGUUU 660 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 GGAAGUUCAG ACAUAUUUAU AGAGGGACGC CUCGGCGUCA CCUUCUUACA ACCGGAUGGA 720 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 GUAAUUUUGU AAACCAGAAG AAGCUUGUGG CGGGAGAUUC GAUUGUCUUC AUGAGAGCGG 780 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 AGAAUGGAGA UCUUUGUGUA GGUAUUAGGA GGGCUAAGAG AGGAGGGAUA GGUAAUGGAC 840 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 CCGAAUAUUC AGCGGGUUGG AAUCCGAUCG GUGGAAGUUG CGGCUACUCU UCUCUGUUAA 900 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 GGGAAGAUGA AAGCAAUAGU UUGAGGAGAA GUAAUUGUUC CCUUGCGGAU AGGAAGGGGA 960 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 AAGUGACGGC UGAAUCUGUU AUAGAAGCAG CCACUCUUGC UAUUAGCGGA AGACCGUUUG 1020 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 AGGUUGUGUA CUAUCCGAGA GCUAGCACUU CAGAGUUUUG UGUCAAGGCA UUAGAUGCUC 1080 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 GAGCUGCCAU GCGGAUUCCG UGGUGCUCAG GUAUGAGGUU UAAGAUGGCU UUUGAGACAG 1140 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 AGGAUUCGUC UCGGAUAAGU UGGUUUAUGG GGACUGUUUC AGCUGUUAAU GUCUCUGAUC 1200 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 CUAUCCGUUG GCCUAACUCU CCUUGGCGGC UUCUACAGGU GGCGUGGGAU GAGCCAGAUU 1260 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 UACUCCAAAA CGUGAAGCGA GUUAACCCGU GGUUGGUGGA AUUGGUAUCA AACGUACAUC 1320 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 CGAUCCCGCU UACUUCGUUU UCGCCACCGA GGAAAAAGAU GCGGCUACCU CAGCAUCCAG 1380 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 AUUACAACAA UCUGAUCAAU UCGAUUCCAG UACCUUCAUU CCCAAGCAAU CCCCUUAUUA 1440 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 GAUCAAGCCC GUUAAGCUCU GUUCUGGACA AUGUUCCCGU GGGUUUACAG GGAGCCAGGC 1500 .......... .......... .......... .........* ********** ********** prec11509 .......... .......... .......... .......... .********* ********** prec11519 .......... .......... .......... .......... .********* ********** prec2086 AUAAUGCUCA UCAGUACUAC GGGUUAUCAU CUUCGGAUCU UCACCAUUAC UACUUGAAUA 1560 ***....... .......... .......... .......... .......... .......... prec11509 ***....... .......... .......... .......... .......... .......... prec11519 *......... .......... .......... .......... .......... .......... prec2086 GACCACCUCC UCCUCCUCCU CCAUCCUCUC UCCAACUUUC UCCUUCUCUC GGUCUCCGAA 1620 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 ACAUCGAUAC CAAAAACGAA AAAGGAUUUU GCUUUUUGAC AAUGGGAACA ACACCAUGCA 1680 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 AUGAUACCAA AUCUAAAAAG UCCCAUAUUG UAUUGUUCGG CAAGCUUAUA CUACCCGAGG 1740 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 AACAGCUAUC AGAAAAAGGC UCAACGGAUA CCGCAAACAU AGAGAAAACG CAGAUUUCAU 1800 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 CAGGCGGGUC GAACCAAAAC GGCGUUGCGG GAAGGGAGUU UUCUUCGUCA GAUGAAGGAU 1860 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 CACCUUGCUC UAAGAAAGUU CAUGAUGCAU CAGGUUUGGA AACAGGGCAU UGUAAAGUGU 1920 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 UUAUGGAGUC AGACGAUGUA GGUCGAACCU UAGACCUAUC GGUUCUUGGU UCAUACGAAG 1980 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 AAUUGAGUCG GAAACUCUCU GACAUGUUUG GAAUCAAAAA GUCUGAGAUG UUAAGCUCUG 2040 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 UUCUCUAUAG GGAUGCAUCA GGAGCCAUCA AAUACGCAGG AAACGAACCU UUCAGUGAGU 2100 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 UCUUGAAGAC AGCUCGAAGA UUGACAAUUC UGACGGAACA AGGAAGUGAG AGCGUUGUAG 2160 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 UAUAAcuugg cagaguguuu uguuggagcu uggaagucaa aacucaacga uugaaucuuu 2220 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 uaaguuuuuu uuuucuuuua uuuguuuauu uuaguuccac uuuuuuggau uauguaaguu 2280 .......... .......... .......... .......... .......... .......... prec11509 .......... .......... .......... .......... .......... .......... prec11519 .......... .......... .......... .......... .......... .......... prec2086 ucaaaaugca auucacaauc uauuugc 2307 .......... .......... ....... prec11509 .......... .......... ....... prec11519 .......... .......... ....... prec2086