At3g62590.1 68410.m06497 lipase (class 3) family
Matching miRNAs:
| miRNA name | IGR name | mature miRNA sequence | Targets | Rfam | |
|---|---|---|---|---|---|
| 1 | prec1402 | igr140#chr1#x1=582220#l=2039_509+594 | CTTCATCTTCATCATCATCAG | 76 | |
| 2 | prec1406 | igr140#chr1#x1=582220#l=2039_509+583 | CTTCATCTTCATCATCATCAG | 76 | |
| 3 | prec1410 | igr140#chr1#x1=582220#l=2039_509+589 | CTTCATCTTCATCATCATCAG | 76 | |
| 4 | prec1414 | igr140#chr1#x1=582220#l=2039_509+586 | CTTCATCTTCATCATCATCAG | 76 |
Gene Sequence:
agauuugauc ggacgaggaa gcugagaaaa aaacaaaaac gacaagagau ucauucaaac 60 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 uugcacgcca acgccggauu auucccggug uauacguauu uuauacgguu cuauuuagga 120 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 agaagaagaa gaagaagaag aagaagagga aauuuuaagg aaagaguuuu uguuugaauu 180 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 ggaAUGGAGG GUGUUUUCUU AAAAAUGUCG GUGGUUGGAG UAUCUCCGAU GAUACCGGUG 240 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GGACCUUCUU CUUUCAUAUG CGCCAUCGGA GGCUCUGUUG AGGAGAAAUC AACGGCUGCU 300 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UCUCUGCCGC GUUGGGUUUC CCUUCGUCGU CUUCGUCCGC UUGAGUUUCU UCGGAUCGGU 360 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GGUAAGAGAG AGGAAAAGGG AACGGUAAGA GACGACGACG CCGUUUUGUU GGAGAGAAGG 420 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GACCGGAACC GCAACGAAAA CGAUAACGGA AACUGGGUUU UGAAAAUUUU GGAGGUUGGA 480 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UCAAUCUGGA AAGGGAAGAG ACAACGAUCA GGUGGCGGUG GCGGUGGAGA AGAGGACGAG 540 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GAAGAGGAAG UUGCUGAGCC UAAGAAGAAG GAAGAUUUAU GUGAGGAAUG CGAUUUCUGC 600 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AGGAUCGAUG AUGAUGAUGA AGACGAAGAA AAGGAGAAGA CAGUGUUUGA GUUCUCGGAG 660 .......*** ********** ********.. .......... .......... .......... prec1402 .......*** ********** ********.. .......... .......... .......... prec1406 .......*** ********** ********.. .......... .......... .......... prec1410 .......*** ********** ********.. .......... .......... .......... prec1414 AUGUUAAGCA AAAUUCCUGU UGAAGAUGCU CAGAUGUUUG CCAAAUUGUC GUUUCUGGGG 720 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AAUUUGGCUU AUUCAAUCCC UAAAAUCAAG CCUGAGAAUC UGUUGAAAUA UCAGAAACUG 780 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AGAUUCGUUA CAUCCUCAAU UGAGAAGAGG AUGAGUCUUA AGGUUGAAGA GAACAACAAU 840 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GGCGAGGAAG AUGAGGAGAA GAAGAAGCUA AUCAACCCUG CUGUUGCUUA CAGAAUCGCU 900 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GCUUCUGCAG CCUCUCGUCU CUUUUCCCAU UCUAAGUCUG UGCUUCCUUU UGGAUCAUCU 960 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AAACGUCAAG ACAACGAAGA AGCUUCUCUA CUGGCUACUG CUGAUUCGGU UACUGCAGUC 1020 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GUGGCAGCCA AAGAGGAAGU UAAGCAGGCC GUCGCAGAUG AUCUCAAAUC AAACCGUUCA 1080 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CCGCCUUGUG AGUGGUUUGU AUGUGAUGAU GAUAAAAGCG GCACCAGGUU CUUCUUUAUU 1140 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CAGGGAUCAG AUUCACUGGC CUCAUGGCAA GCUAACCUUC UGUUCGAGCC UGUUCCAUUU 1200 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GAGGACCUUG AUGUGCUUGU UCACAGAGGC AUAUACGAAG CUGCAAAAGG AAUAUACGAA 1260 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CAGAUGUUAC CAGAAGUUCA UGCCCACCUC AAUUCCCGUG GCAAGAACCG UGCUUUUCUC 1320 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AGGUUUAGUG GACAUUCUCU AGGCGGAAGC UUGUCAUUGU UAGUGAACCU CAUGCUUCUG 1380 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AUAAGAGGUC AAGUCCCUGC UUCUUCUCUG CUUCCAGUGA UCACUUUUGG UUCGCCUUGC 1440 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AUCAUGUGCG GAGGCGAUAG GCUUCUUCAG AAACUUGGUU UGCCUAAGAG UCAUCUUCUC 1500 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GGAAUCUCAA UGCAUAGAGA UAUUGUUCCU CGAGCAUUCU CCUGCAAUUA CCCUAACCGA 1560 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GCCGCAAAGC UUCUCAAGGC AUUGAAUGGA AACUUCCGGA ACCAUCCUUG UCUGAAUAAC 1620 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CAGAAUGUAU UGUAUUCUCC AAUGGGGAAG CUUCUAAUUC UGCAACCAUC CGAGAGAUUC 1680 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 UCUCCCCCAC ACCCCCUGCU UCCUCCCGGA AGUGGUCUCU AUCUCUUAGC AUCUAAGAAU 1740 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 ACCGAUGAAA CAGAGAAAAG UCUAAGGGCU GCAAAGAUUC UCUUCUUUAA CUCACCACAC 1800 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CCCCUAGAGA UUCUCAGUGA UCGUCGUUCU UACGGGUCGG AAGGAAAAAU CAAAAGAAAC 1860 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CAUGACAUGA GCUCUUACCU GAAGGCCUUG AGGCAUGUGA UCCGGAAGGA GCUGAAGCAG 1920 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AUGAAAGCUG AGCGGGAUCA AUGGCUGCGC AAGUUCUUUA UUAUAAACAU UUUAUUUAGU 1980 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 GGGAGAGAUU CUUUGAAACU CAUAACAAGA UUCGUGGCAU CAAGGAGUAG UCAACUAGUG 2040 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 AUCAUCUUCU UUCUCCCAAU UAGAUUGUUA AUAAUGAGUG UCUACAGUGU GGUCUUUCAC 2100 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 CAUUCACAAG CACAUUUUAG UUUCUUCAAG UGAagcagcu uaggccuauu cuguaauaga 2160 .......... .......... .......... .......... .......... .......... prec1402 .......... .......... .......... .......... .......... .......... prec1406 .......... .......... .......... .......... .......... .......... prec1410 .......... .......... .......... .......... .......... .......... prec1414 aucuaucaaa cauggauuau uuuuag 2186 .......... .......... ...... prec1402 .......... .......... ...... prec1406 .......... .......... ...... prec1410 .......... .......... ...... prec1414