Included Genes in escherichiacoli_k12_mg1655 : X |
gene_id | protein_id | gene_family | cog | cog_description | product |
U00096_2173079 | AAC75156.1 | 10649 | | | putative tagatose 6-phosphate kinase 1 |
U00096_3276555 | AAC76166.1 | 10649 | | | putative tagatose 6-phosphate kinase 2 |
U00096_1687876 | AAC74686.1 | 10751 | | | orf, hypothetical protein |
U00096_4041737 | AAC76859.1 | 10751 | | | putative GTP-binding protein |
U00096_3372504 | AAC76259.1 | 10840 | | | putative transport protein |
U00096_3553466 | AAC76444.1 | 10855 | | | orf, hypothetical protein |
U00096_3554044 | AAC76445.1 | 10855 | | | RNA 3'-terminal phosphate cyclase |
U00096_4061889 | AAC76873.1 | 11159 | | | putative permease |
U00096_2940940 | AAC75851.1 | 11170 | | | orf, hypothetical protein |
U00096_2969293 | AAC75872.1 | 11170 | | | orf, hypothetical protein |
U00096_4076844 | AAD13451.1 | 11597 | | | orf, hypothetical protein |
U00096_4077307 | AAD13452.1 | 11597 | | | orf, hypothetical protein |
U00096_267321 | AAC73356.1 | 12275 | | | putative GTP-binding protein |
U00096_2068523 | AAC75060.1 | 12275 | | | putative histone |
U00096_2765725 | AAC75680.1 | 12275 | | | putative GTP-binding protein |
U00096_2516472 | AAC75455.1 | 12439 | | | orf, hypothetical protein |
U00096_2516833 | AAC75456.1 | 12439 | | | orf, hypothetical protein |
U00096_3573695 | AAC76461.1 | 1258 | | | low-affinity gluconate transport permease protein, interrupted |
U00096_4518239 | AAC77252.1 | 1258 | | | putative transport system permease |
U00096_1901910 | AAC74889.1 | 12651 | | | PTS enzyme IID, mannose-specific |
U00096_3283119 | AAC76174.1 | 12651 | | | PTS system, N-acetylglucosamine enzyme IID component 1 |
U00096_2746818 | AAC75661.1 | 12775 | | | orf, hypothetical protein |
U00096_2747398 | AAC75662.1 | 12775 | | | putative transport protein |
U00096_1823164 | AAC74813.1 | 14238 | | | periplasmic protein related to spheroblast formation |
U00096_4103532 | AAC76896.1 | 14238 | | | orf, hypothetical protein |
U00096_3252981 | AAC76143.1 | 14406 | | | orf, hypothetical protein |
U00096_3253729 | AAC76144.1 | 14406 | | | orf, hypothetical protein |
U00096_337549 | AAC73424.1 | 15327 | | | orf, hypothetical protein |
U00096_547838 | AAC73621.1 | 15327 | | | orf, hypothetical protein |
U00096_3358811 | AAC76246.1 | 15850 | | | regulator of gltBDF operon, induction of Ntr enzymes |
U00096_3364561 | AAC76251.1 | 15850 | | | putative transcriptional regulator |
U00096_2609414 | AAC75543.1 | 16465 | | | putative protein processing element |
U00096_2841059 | AAC75760.1 | 16465 | | | processing of large subunit (HycE) of hydrogenase 3 (part of the FHL complex) |
U00096_1863750 | AAC74852.1 | 16656 | | | orf, hypothetical protein |
U00096_3748758 | AAC76608.1 | 16656 | | | putative outer membrane protein |
U00096_558920 | AAC73634.1 | 16679 | | | putative outer membrane protein, export function |
U00096_748945 | AAC73812.1 | 16679 | | | putative outer membrane protein |
U00096_998439 | AAC74026.1 | 16679 | | | putative outer membrane protein |
U00096_2451285 | AAC75398.1 | 16679 | | | putative outer membrane protein |
U00096_4542665 | AAC77273.1 | 16679 | | | outer membrane protein; export and assembly of type 1 fimbriae, interrupted |
U00096_1487985 | AAC74499.1 | 16746 | | | glyceraldehyde 3-phosphate dehydrogenase C, interrupted |
U00096_3494892 | AAC76392.1 | 17368 | | | nitrite reductase activity |
U00096_1584844 | AAC74575.1 | 17871 | | | putative adhesin; similar to FimH protein |
U00096_4546377 | AAC77276.1 | 17871 | | | minor fimbrial subunit, D-mannose specific adhesin |
U00096_1039840 | AAC74065.1 | 18186 | | | phosphoanhydride phosphorylase; pH 2.5 acid phosphatase; periplasmic |
U00096_1064808 | AAC74087.1 | 18186 | | | periplasmic glucose-1-phosphatase |
U00096_2538824 | AAC75476.1 | 18314 | | | sulfate transport system permease W protein |
U00096_675934 | AAC73746.1 | 18831 | | | orf, hypothetical protein |
U00096_678731 | AAC73749.1 | 18831 | | | putative tRNA ligase |
U00096_3130469 | AAC76020.1 | 19232 | | | orf, hypothetical protein |
U00096_3131259 | AAC76021.1 | 19232 | | | orf, hypothetical protein |
U00096_3132146 | AAC76022.1 | 19232 | | | orf, hypothetical protein |
U00096_389475 | AAC73474.1 | 19474 | | | orf, hypothetical protein |
U00096_392239 | AAC73477.1 | 19474 | | | putative flagellin structural protein |
U00096_526805 | AAC73600.1 | 19573 | | | orf, hypothetical protein |
U00096_3621045 | AAC76508.1 | 19573 | | | orf, hypothetical protein |
U00096_85540 | AAC73188.1 | 19738 | | | acetolactate synthase III, valine sensitive, large subunit |
U00096_3948183 | AAC77488.1 | 19738 | | | acetolactate synthase II, large subunit, cryptic, interrupted |
U00096_333749 | AAC73420.1 | 19784 | | | orf, hypothetical protein |
U00096_1099471 | AAC74120.1 | 19784 | | | orf, hypothetical protein |
U00096_3957627 | AAC76781.1 | 20073 | | | orf, hypothetical protein |
U00096_3957857 | AAC76782.1 | 20073 | | | orf, hypothetical protein |
U00096_4424206 | AAC77161.1 | 20473 | | | orf, hypothetical protein |
U00096_4553059 | AAC77281.1 | 20473 | | | orf, hypothetical protein |
U00096_263972 | AAC73351.1 | 20712 | | | orf, hypothetical protein |
U00096_2773940 | AAC75691.1 | 20712 | | | orf, hypothetical protein |
U00096_3156944 | AAC76051.1 | 20967 | | | orf, hypothetical protein |
U00096_3158185 | AAC76052.1 | 20967 | | | orf, hypothetical protein |
U00096_1755445 | AAC74747.1 | 21160 | | | murein lipoprotein |
U00096_3156644 | AAC76050.1 | 21160 | | | orf, hypothetical protein |
U00096_266408 | AAC73355.1 | 21393 | | | orf, hypothetical protein |
U00096_2766686 | AAC75681.1 | 21393 | | | orf, hypothetical protein |
U00096_1901106 | AAC74888.1 | 22658 | | | PTS enzyme IIC, mannose-specific |
U00096_3278342 | AAC76168.1 | 22658 | | | PTS system N-acetylgalactosameine-specific IIC component 2 |
U00096_3282326 | AAC76173.1 | 22658 | | | PTS system N-acetylgalactosamine-specific IIC component 1 |
U00096_345708 | AAC73432.1 | 22727 | | | orf, hypothetical protein |
U00096_836888 | AAC73889.1 | 22727 | | | orf, hypothetical protein |
U00096_1168296 | AAC74196.1 | 22727 | | | orf, hypothetical protein |
U00096_3383122 | AAC76270.1 | 22727 | | | orf, hypothetical protein |
U00096_1096171 | AAC74115.1 | 23277 | | | orf, hypothetical protein |
U00096_1096190 | AAC74116.1 | 23277 | | | putative ribosomal protein |
U00096_2378742 | AAC75326.1 | 23951 | | | orf, hypothetical protein |
U00096_2798155 | AAC75719.1 | 23951 | | | orf, hypothetical protein |
U00096_3247015 | AAC76133.1 | 23951 | | | orf, hypothetical protein |
U00096_4007918 | AAC76829.1 | 24226 | | | orf, hypothetical protein |
U00096_558197 | AAC73633.1 | 25109 | | | putative chaperone |
U00096_748202 | AAC73811.1 | 25109 | | | putative chaperone |
U00096_997713 | AAC74025.1 | 25109 | | | putative chaperone |
U00096_2449604 | AAC75396.1 | 25109 | | | putative chaperone |
U00096_3187888 | AAC76083.1 | 25109 | | | putative membrane protein |
U00096_1432015 | AAC74457.1 | 25250 | | | orf, hypothetical protein |
U00096_1631063 | AAC74617.1 | 25250 | | | orf, hypothetical protein |
U00096_747144 | AAC73810.1 | 25317 | | | orf, hypothetical protein |
U00096_3188648 | AAC76084.1 | 25317 | | | orf, hypothetical protein |
U00096_3144871 | AAC76035.1 | 25386 | | | orf, hypothetical protein |
U00096_3145281 | AAC76036.1 | 25386 | | | orf, hypothetical protein |
U00096_557402 | AAC73632.1 | 25556 | | | putative fimbrial-like protein |
U00096_997082 | AAC74024.1 | 25556 | | | putative fimbrial-like protein |
U00096_264844 | AAC73353.1 | 27294 | | | orf, hypothetical protein |
U00096_2769169 | AAC75685.1 | 27294 | | | orf, hypothetical protein |
U00096_2512345 | AAC75453.1 | 28137 | | | IS186 hypothetical protein |
U00096_2768453 | AAC75684.1 | 28395 | | | orf, hypothetical protein |
U00096_2916067 | AAC75829.1 | 28416 | | | putative glucarate dehydratase |
U00096_2917428 | AAC75830.1 | 28416 | | | putative glucarate dehydratase |
U00096_1980578 | AAC74968.1 | 31705 | | | high-affinity L-arabinose transport system; membrane protein, fragment 2 |
U00096_1980862 | AAC74969.1 | 31705 | | | high-affinity L-arabinose transport system; membrane protein, fragment 1 |
U00096_4472037 | AAC77208.1 | 31756 | | | orf, hypothetical protein |
U00096_3516181 | AAC76415.1 | 32384 | | | shikimate kinase I |
U00096_3872099 | AAC76717.1 | 32965 | | | putative FADA-type transcriptional regulator |
U00096_296605 | AAC73385.1 | 33815 | | | putative transcriptional regulator LYSR-type |
U00096_2167715 | AAC75148.1 | 34320 | | | split galactitol utilization operon repressor, interrupted |
U00096_1175857 | AAC74201.1 | 35629 | | | putative ATP-binding component of a transport system |
U00096_223771 | | 35674 | | | 16S ribosomal RNA |
U00096_2727636 | | 35674 | | | 16S ribosomal RNA |
U00096_3424858 | | 35674 | | | 16S ribosomal RNA |
U00096_3939431 | | 35674 | | | 16S ribosomal RNA |
U00096_4033120 | | 35674 | | | 16S ribosomal RNA |
U00096_4164238 | | 35674 | | | 16S ribosomal RNA |
U00096_4205725 | | 35674 | | | 16S ribosomal RNA |
U00096_225759 | | 35681 | | | 23S ribosomal RNA |
U00096_2724301 | | 35681 | | | 23S ribosomal RNA |
U00096_3421517 | | 35681 | | | 23S ribosomal RNA |
U00096_3941326 | | 35681 | | | 23S ribosomal RNA |
U00096_4035099 | | 35681 | | | 23S ribosomal RNA |
U00096_4166220 | | 35681 | | | 23S ribosomal RNA |
U00096_4207622 | | 35681 | | | 23S ribosomal RNA |
U00096_228756 | | 35685 | | | 5S ribosomal RNA |
U00096_2724089 | | 35685 | | | 5S ribosomal RNA |
U00096_3421059 | | 35685 | | | 5S ribosomal RNA |
U00096_3421305 | | 35685 | | | 5S ribosomal RNA |
U00096_3944324 | | 35685 | | | 5S ribosomal RNA |
U00096_4038097 | | 35685 | | | 5S ribosomal RNA |
U00096_4169216 | | 35685 | | | 5S ribosomal RNA |
U00096_4210619 | | 35685 | | | 5S ribosomal RNA |
U00096_4021131 | AAC76843.1 | 3753 | | | orf, hypothetical protein |
U00096_4611194 | AAC77331.1 | 3753 | | | orf, hypothetical protein |
U00096_1047911 | AAC74071.1 | 3936 | | | putative regulator |
U00096_4233811 | AAC76997.1 | 3936 | | | orf, hypothetical protein |
U00096_3751735 | AAC76611.1 | 4297 | | | orf, hypothetical protein |
U00096_3769009 | AAC76622.1 | 4297 | | | orf, hypothetical protein |
U00096_3997905 | AAC76817.1 | 4514 | | | orf, hypothetical protein |
U00096_3998183 | AAC76818.1 | 4514 | | | orf, hypothetical protein |
U00096_262914 | AAC73349.1 | 4922 | | | orf, hypothetical protein |
U00096_279609 | AAC73369.1 | 4922 | | | orf, hypothetical protein |
U00096_2075134 | AAC75065.1 | 4922 | | | putative structural protein |
U00096_2775136 | AAC75693.1 | 4922 | | | orf, hypothetical protein |
U00096_2569783 | AAC75509.1 | 5504 | | | detox protein |
U00096_2570177 | AAC75510.1 | 5504 | | | detox protein |
U00096_2770188 | AAC75687.1 | 6098 | | | putative pump protein |
U00096_2458670 | AAC75403.1 | 6134 | | | orf, hypothetical protein |
U00096_4110547 | AAC76904.1 | 6134 | | | orf, hypothetical protein |
U00096_479314 | AAC73562.1 | 6192 | | | haemolysin expression modulating protein |
U00096_1702973 | AAC74697.1 | 6192 | | | orf, hypothetical protein |
U00096_1047168 | AAC74070.1 | 6816 | | | orf, hypothetical protein |
U00096_4234476 | AAC76998.1 | 6816 | | | orf, hypothetical protein |
U00096_3534414 | AAC76431.1 | 6876 | | | transcription elongation factor and transcript cleavage |
U00096_291546 | AAC73380.1 | 6993 | | | orf, hypothetical protein |
U00096_2758568 | AAC75674.1 | 6993 | | | orf, hypothetical protein |
U00096_694324 | AAC73763.1 | 7048 | | | orf, hypothetical protein |
U00096_728806 | AAC73794.1 | 7145 | | | rhsC protein in rhs element |
U00096_644340 | AAC73713.1 | 8192 | | | putative a membrane protein |
U00096_4621714 | AAC77340.1 | 83 | | | orf, hypothetical protein |
U00096_2170943 | AAC75153.1 | 8702 | | | PTS system galactitol-specific enzyme IIC |
U00096_4526498 | AAC77260.1 | 8702 | | | putative PTS system enzyme IIC component |
U00096_1045072 | AAC74069.1 | 8783 | | | orf, hypothetical protein |
U00096_4235213 | AAC76999.1 | 8783 | | | orf, hypothetical protein |
U00096_2195430 | AAC75177.1 | 8805 | | | molybdate metabolism regulator, second fragment 2 |
U00096_2197288 | AAC75178.1 | 8805 | | | molybdate metabolism regulator, third fragment |
U00096_2198299 | AAC75179.1 | 8805 | | | putative regulator |
U00096_676638 | AAC73747.1 | 8829 | | | putative enzyme of polynucleotide modification |
U00096_679435 | AAC73750.1 | 8829 | | | orf, hypothetical protein |
U00096_1174650 | AAC74200.1 | 9040 | | | orf, hypothetical protein |
U00096_1176543 | AAC74202.1 | 9040 | | | putative kinase |
U00096_1494880 | AAC74506.1 | 9504 | | | putative glycoprotein |
U00096_3860124 | AAC76706.1 | 9558 | | | PTS system, arbutin-like IIC component |
U00096_72229 | AAC73177.1 | 35629 | COG1130 | | putative ATP-binding component of a transport system |
U00096_276980 | AAC73365.1 | 35629 | COG1130 | | putative ATP-binding component of a transport system |
U00096_894133 | AAC73942.1 | 35629 | COG1130 | | ATP-binding component of putrescine transport system |
U00096_1183681 | AAC74210.1 | 35629 | COG1130 | | ATP-binding component of spermidine/putrescine transport |
U00096_1378845 | AAC74400.1 | 35629 | COG1130 | | putative ATP-binding component of a transport system |
U00096_1510841 | AAC74523.1 | 35629 | COG1130 | | putative ATP-binding component of a transport system |
U00096_1836771 | AAC74826.1 | 35629 | COG1130 | | putative ATP-binding component of a transport system |
U00096_3585741 | AAC76475.1 | 35629 | COG1130 | | ATP-binding component of sn-glycerol 3-phosphate transport system |
U00096_4244363 | AAC77005.1 | 35629 | COG1130 | | ATP-binding component of transport system for maltose |
Excluded Genes in escherichiacoli_k12_mg1655 : X |
gene_id | protein_id | gene_family | cog | cog_description | product |
U00096_576621 | AAC73655.1 | 10646 | | | orf, hypothetical protein |
U00096_1638394 | AAC74629.1 | 10646 | | | orf, hypothetical protein |
U00096_262552 | AAC73348.1 | 11361 | | | orf, hypothetical protein |
U00096_2075591 | AAC75066.1 | 11361 | | | orf, hypothetical protein |
U00096_2775474 | AAC75694.1 | 11361 | | | orf, hypothetical protein |
U00096_578407 | AAC73659.1 | 13136 | | | putative an envelop protein |
U00096_1211926 | AAC74245.1 | 13136 | | | orf, hypothetical protein |
U00096_1635056 | AAC74622.1 | 13136 | | | orf, hypothetical protein |
U00096_576836 | AAC73656.1 | 14010 | | | bacteriophage lambda lysozyme homolog |
U00096_1637548 | AAC74627.1 | 14010 | | | putative lysozyme |
U00096_16751 | AAC73129.1 | 14890 | | | Gef protein interferes with membrane function when in excess |
U00096_1643143 | AAC74635.1 | 14890 | | | polypeptide destructive to membrane potential |
U00096_1207355 | AAC74239.1 | 15580 | | | orf, hypothetical protein |
U00096_2469097 | AAC75413.1 | 15580 | | | orf, hypothetical protein |
U00096_1206724 | AAC74238.1 | 19244 | | | orf, hypothetical protein |
U00096_1208342 | AAC74241.1 | 19244 | | | putative tail fiber protein |
U00096_2469564 | AAC75414.1 | 19244 | | | putative RNA polymerase beta |
U00096_1412810 | AAC74432.1 | 25063 | | | exonuclease VIII, ds DNA exonuclease, 5'--> 3' specific |
U00096_1648102 | AAC74649.1 | 25063 | | | orf, hypothetical protein |
U00096_20233 | AAC73133.1 | 32761 | | | IS1 protein InsA |
U00096_278824 | AAC73368.1 | 32761 | | | IS1 protein InsA |
U00096_290295 | AAC73378.1 | 32761 | | | IS1 protein InsA |
U00096_1976964 | AAC74964.1 | 32761 | | | IS1 protein InsA |
U00096_3581114 | AAC76469.1 | 32761 | | | IS1 protein InsA |
U00096_4516095 | AAC77250.1 | 32761 | | | IS1 protein InsA |
U00096_380898 | AAC73464.1 | 32762 | | | IS2 hypothetical protein |
U00096_1293649 | AAC74321.1 | 32921 | | | orf, hypothetical protein |
U00096_736327 | AAC73799.1 | 34110 | | | putative receptor protein |
U00096_737315 | AAC73800.1 | 34110 | | | putative DNA ligase |
U00096_1528610 | AAC74540.1 | 34110 | | | orf, hypothetical protein |
U00096_1529840 | AAC74542.1 | 34110 | | | putative receptor |
U00096_3622009 | AAC76509.1 | 34110 | | | putative receptor |
U00096_146968 | AAC73243.1 | 4754 | | | orf, hypothetical protein |
U00096_2354924 | AAC75304.1 | 4754 | | | orf, hypothetical protein |
U00096_2420669 | AAC75365.1 | 4754 | | | orf, hypothetical protein |
U00096_3540803 | AAC76436.1 | 4754 | | | orf, hypothetical protein |
U00096_4566567 | AAC77294.1 | 4754 | | | orf, hypothetical protein |
U00096_4566927 | AAC77295.1 | 4754 | | | orf, hypothetical protein |
U00096_577330 | AAC73657.1 | 6900 | | | bacteriophage lambda endopeptidase homolog |
U00096_1421363 | AAC74444.1 | 6900 | | | putative Rac prophage endopeptidase |
U00096_580577 | AAC73662.1 | 7461 | | | orf, hypothetical protein |
U00096_1207740 | AAC74240.1 | 7461 | | | orf, hypothetical protein |
U00096_1430435 | AAC74455.1 | 7461 | | | orf, hypothetical protein |
U00096_1632334 | AAC74619.1 | 7461 | | | orf, hypothetical protein |
U00096_2468781 | AAC75412.1 | 7461 | | | orf, hypothetical protein |
U00096_580057 | AAC73661.1 | 9138 | | | bacteriophage DNA packaging protein |
U00096_1633822 | AAC74621.1 | 9138 | | | homolog of Qin prophage packaging protein NU1 |