| All COGs for vibriocholerae_n16961_o1 : T |
| Genes (#) | COG | COG description |
| 2 | COG0271 | Stress-induced morphogen (activity unknown) |
| 2 | COG0317 | Guanosine polyphosphate pyrophosphohydrolases/synthetases |
| 2 | COG0394 | Protein-tyrosine-phosphatase |
| 2 | COG0589 | Universal stress protein UspA and related nucleotide-binding proteins |
| 3 | COG0642 | Signal transduction histidine kinase |
| 2 | COG0643 | Chemotaxis protein histidine kinase and related kinases |
| 12 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
| 10 | COG0784 | FOG: CheY-like receiver |
| 4 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
| 4 | COG0835 | Chemotaxis signal transduction protein |
| 27 | COG0840 | Methyl-accepting chemotaxis protein |
| 1 | COG1217 | Predicted membrane GTPase involved in stress response |
| 3 | COG1221 | Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain |
| 3 | COG1352 | Methylase of chemotaxis methyl-accepting proteins |
| 4 | COG1762 | Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
| 6 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
| 2 | COG2201 | Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain |
| 3 | COG2202 | FOG: PAS/PAC domain |
| 7 | COG2204 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
| 2 | COG3279 | Response regulator of the LytR/AlgR family |
| 2 | COG3290 | Signal transduction histidine kinase regulating citrate/malate metabolism |
| 3 | COG3434 | Predicted signal transduction protein containing EAL and modified HD-GYP domains |
| 1 | COG3604 | Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
| Included Genes in vibriocholerae_n16961_o1 : T |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| AE003852_2451257 | AAF95440.1 | 34690 | COG0271 | Stress-induced morphogen (activity unknown) | bolA protein |
| AE003852_2703656 | AAF95657.1 | 34690 | COG0271 | Stress-induced morphogen (activity unknown) | BolA/YrbA family protein |
| AE003852_2880976 | AAF95850.1 | 32745 | COG0317 | Guanosine polyphosphate pyrophosphohydrolases/synthetases | guanosine-3',5'-bis(diphosphate)3'-pyrophosphohydrolase |
| AE003852_2630823 | AAF95593.1 | 32745 | COG0317 | Guanosine polyphosphate pyrophosphohydrolases/synthetases | GTP pyrophosphokinase |
| AE003852_978644 | AAF94078.1 | 22782 | COG0394 | Protein-tyrosine-phosphatase | phosphotyrosine protein phosphatase |
| AE003852_1109436 | AAF94200.1 | 22782 | COG0394 | Protein-tyrosine-phosphatase | phosphotyrosine protein phosphatase |
| AE003852_456859 | AAF93601.1 | 6908 | COG0589 | Universal stress protein UspA and related nucleotide-binding proteins | conserved hypothetical protein |
| AE003852_76210 | AAF93254.1 | 6908 | COG0589 | Universal stress protein UspA and related nucleotide-binding proteins | universal stress protein A |
| AE003852_1226912 | AAF94315.1 | 22614 | COG0642 | Signal transduction histidine kinase | sensor histidine kinase |
| AE003853_664193 | AAF96618.1 | 28510 | COG0642 | Signal transduction histidine kinase | sensor histide kinase |
| AE003852_1149990 | AAF94243.1 | 28510 | COG0642 | Signal transduction histidine kinase | sensory box sensor histidine kinase |
| AE003853_1050278 | AAF96987.1 | 26799 | COG0643 | Chemotaxis protein histidine kinase and related kinases | chemotaxis protein CheA |
| AE003852_2217625 | AAF95209.1 | 26799 | COG0643 | Chemotaxis protein histidine kinase and related kinases | chemotaxis protein CheA |
| AE003853_504647 | AAF96468.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | transcriptional regulator |
| AE003852_1764280 | AAF94789.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | DNA-binding response regulator |
| AE003852_1857523 | AAF94869.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | DNA-binding response regulator TorR |
| AE003852_772267 | AAF93884.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | DNA-binding response regulator PhoB |
| AE003852_2524550 | AAF95511.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | aerobic respiration control protein FexA |
| AE003852_2859805 | AAF95833.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | transcriptional regulator CpxR |
| AE003852_2888451 | AAF95854.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | transcriptional regulator OmpR, |
| AE003853_260372 | AAF96150.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | transcriptional regulator |
| AE003853_276337 | AAF96167.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | transcriptional regulator |
| AE003853_470476 | AAF96435.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | DNA-binding response regulator |
| AE003853_1061510 | AAF96996.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | DNA-binding response regulator |
| AE003852_1403673 | AAF94478.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | DNA-binding response regulator |
| AE003853_903131 | AAF96850.1 | 14396 | COG0784 | FOG: CheY-like receiver | chemotaxis protein CheV, putative |
| AE003852_2348060 | AAF95347.1 | 14396 | COG0784 | FOG: CheY-like receiver | chemotaxis protein CheV |
| AE003852_1715544 | AAF94756.1 | 14396 | COG0784 | FOG: CheY-like receiver | chemotaxis protein CheV |
| AE003852_1228096 | AAF94316.1 | 22614 | COG0784 | FOG: CheY-like receiver | response regulator |
| AE003852_2220767 | AAF95211.1 | 27701 | COG0784 | FOG: CheY-like receiver | chemotaxis protein CheY |
| AE003852_1149033 | AAF94241.1 | 27701 | COG0784 | FOG: CheY-like receiver | response regulator |
| AE003852_1489340 | AAF94555.1 | 27701 | COG0784 | FOG: CheY-like receiver | chemotaxis protein CheY |
| AE003853_1052489 | AAF96988.1 | 27701 | COG0784 | FOG: CheY-like receiver | chemotaxis protein CheY |
| AE003852_1399817 | AAF94474.1 | 8836 | COG0784 | FOG: CheY-like receiver | chemotaxis protein CheY, putative |
| AE003852_1226418 | AAF94314.1 | 8836 | COG0784 | FOG: CheY-like receiver | response regulator |
| AE003853_989435 | AAF96933.1 | 32448 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | amino acid ABC transporter, periplasmic amino acid-binding protein |
| AE003853_702954 | AAF96657.1 | 32448 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | arginine ABC transporter, periplasmic arginine-binding protein |
| AE003852_6354 | AAF93188.1 | 32448 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | amino acid ABC transporter, periplasmic amino acid-binding portion |
| AE003852_2002699 | AAF95011.1 | 32448 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | amino acid ABC transporter, periplasmic amino acid-binding protein |
| AE003852_2158278 | AAF95154.1 | 14396 | COG0835 | Chemotaxis signal transduction protein | chemotaxis protein CheV |
| AE003853_1049742 | AAF96986.1 | 19815 | COG0835 | Chemotaxis signal transduction protein | purine-binding chemotaxis protein CheW |
| AE003853_1049284 | AAF96985.1 | 19815 | COG0835 | Chemotaxis signal transduction protein | purine-binding chemotaxis protein CheW |
| AE003852_2214137 | AAF95205.1 | 19815 | COG0835 | Chemotaxis signal transduction protein | purine-binding chemotaxis protein CheW |
| AE003853_1018626 | AAF96963.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003853_815881 | AAF96762.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003853_594586 | AAF96559.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003852_2308741 | AAF95306.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003852_1498168 | AAF94563.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003852_1768345 | AAF94794.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003852_545174 | AAF93684.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003852_95592 | AAF93276.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003852_223454 | AAF93392.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003852_289352 | AAF93457.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003852_901494 | AAF94003.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | accessory colonization factor AcfB |
| AE003852_1366600 | AAF94448.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003852_2044494 | AAF95046.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003852_1997948 | AAF95007.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003853_6624 | AAF95922.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003853_285034 | AAF96179.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003853_77459 | AAF95982.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003853_192834 | AAF96089.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003853_874442 | AAF96820.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003852_479294 | AAF93622.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003852_1319246 | AAF94407.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003852_1395061 | AAF94471.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003853_240114 | AAF96132.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | hemolysin secretion protein HylB |
| AE003853_919898 | AAF96870.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003853_984002 | AAF96929.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003852_1505902 | AAF94570.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003853_598557 | AAF96564.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein |
| AE003852_2916766 | AAF95883.1 | 1836 | COG1217 | Predicted membrane GTPase involved in stress response | GTP-binding protein TypA |
| AE003852_712395 | AAF93830.1 | 31616 | COG1221 | Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain | sigma-54 dependent transcriptional regulator |
| AE003852_1812689 | AAF94829.1 | 31616 | COG1221 | Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain | psp operon transcriptional activator |
| AE003852_2291312 | AAF95282.1 | 31616 | COG1221 | Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain | sigma-54 dependent transcriptional activator |
| AE003852_1489689 | AAF94556.1 | 5722 | COG1352 | Methylase of chemotaxis methyl-accepting proteins | chemotaxis protein methyltransferase CheR |
| AE003852_2347222 | AAF95346.1 | 5722 | COG1352 | Methylase of chemotaxis methyl-accepting proteins | chemotaxis protein methyltransferase CheR |
| AE003853_1046389 | AAF96983.1 | 5722 | COG1352 | Methylase of chemotaxis methyl-accepting proteins | chemotaxis protein methyltransferase CheR |
| AE003852_1967400 | AAF94974.1 | 23919 | COG1762 | Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) | PTS system, fructose-specific IIABC component |
| AE003852_1961098 | AAF94968.1 | 4753 | COG1762 | Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) | PTS system, fructose-specific IIA component |
| AE003852_2713688 | AAF95672.1 | 4753 | COG1762 | Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) | PTS system, nitrogen regulatory IIA component |
| AE003853_264715 | AAF96156.1 | 4753 | COG1762 | Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) | PTS system, IIA component |
| AE003852_1352113 | AAF94436.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | transcriptional regulator, LuxR family |
| AE003852_1717391 | AAF94758.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | response regulator |
| AE003853_617798 | AAF96582.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | transcriptional regulator UhpA |
| AE003852_1290575 | AAF94372.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | transcriptional regulator, LuxR family |
| AE003852_2873971 | AAF95842.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | transcriptional regulator, LuxR family |
| AE003852_845591 | AAF93955.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | transcriptional regulator CitB |
| AE003852_1491209 | AAF94558.1 | 4287 | COG2201 | Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain | protein-glutamate methylesterase CheB |
| AE003852_2216465 | AAF95208.1 | 4287 | COG2201 | Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain | protein-glutamate methylesterase CheB |
| AE003853_1047234 | AAF96984.1 | 32245 | COG2202 | FOG: PAS/PAC domain | methyl-accepting chemotaxis protein |
| AE003852_541319 | AAF93682.1 | 32245 | COG2202 | FOG: PAS/PAC domain | methyl-accepting chemotaxis protein |
| AE003853_940679 | AAF96884.1 | 32245 | COG2202 | FOG: PAS/PAC domain | methyl-accepting chemotaxis protein |
| AE003852_2288709 | AAF95280.1 | 31616 | COG2204 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | sigma-54 dependent response regulator |
| AE003852_1636715 | AAF94676.1 | 31616 | COG2204 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | sigma-54 dependent response regulator |
| AE003852_2077537 | AAF95074.1 | 31616 | COG2204 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | C4-dicarboxylate transport transcriptional regulatory protein |
| AE003852_2922461 | AAF95888.1 | 31616 | COG2204 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | nitrogen regulation protein NR(I) |
| AE003852_1090250 | AAF94180.1 | 31616 | COG2204 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | LuxO repressor protein |
| AE003853_157539 | AAF96055.1 | 31616 | COG2204 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | C4-dicarboxylate transport transcriptional regulatory protein |
| AE003853_644568 | AAF96603.1 | 31616 | COG2204 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | phosphoglycerate transport system transcriptional regulatory protein PgtA |
| AE003853_801121 | AAF96748.1 | 33796 | COG3279 | Response regulator of the LytR/AlgR family | response regulator |
| AE003852_740893 | AAF93858.1 | 33796 | COG3279 | Response regulator of the LytR/AlgR family | response regulator |
| AE003852_1718077 | AAF94759.1 | 23322 | COG3290 | Signal transduction histidine kinase regulating citrate/malate metabolism | sensor kinase citA, putative |
| AE003852_846288 | AAF93956.1 | 23322 | COG3290 | Signal transduction histidine kinase regulating citrate/malate metabolism | sensor kinase citA |
| AE003852_547158 | AAF93685.1 | 6591 | COG3434 | Predicted signal transduction protein containing EAL and modified HD-GYP domains | conserved hypothetical protein |
| AE003852_131313 | AAF93314.1 | 6591 | COG3434 | Predicted signal transduction protein containing EAL and modified HD-GYP domains | conserved hypothetical protein |
| AE003852_1990171 | AAF94999.1 | 6591 | COG3434 | Predicted signal transduction protein containing EAL and modified HD-GYP domains | conserved hypothetical protein |
| AE003853_200338 | AAF96095.1 | 31616 | COG3604 | Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains | sigma-54 dependent transcriptional regulator |
