| All COGs for salmonellatyphimuriumlt2_lt2sgsc1412atcc700720 : T |
| Genes (#) | COG | COG description |
| 1 | COG0271 | Stress-induced morphogen (activity unknown) |
| 2 | COG0317 | Guanosine polyphosphate pyrophosphohydrolases/synthetases |
| 4 | COG0589 | Universal stress protein UspA and related nucleotide-binding proteins |
| 2 | COG0642 | Signal transduction histidine kinase |
| 14 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
| 1 | COG0784 | FOG: CheY-like receiver |
| 6 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
| 6 | COG0840 | Methyl-accepting chemotaxis protein |
| 1 | COG1217 | Predicted membrane GTPase involved in stress response |
| 3 | COG1221 | Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain |
| 2 | COG1702 | Phosphate starvation-inducible protein PhoH, predicted ATPase |
| 5 | COG1762 | Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
| 2 | COG1966 | Carbon starvation protein, predicted membrane protein |
| 2 | COG1974 | SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
| 7 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
| 1 | COG2199 | FOG: GGDEF domain |
| 1 | COG2202 | FOG: PAS/PAC domain |
| 4 | COG2204 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
| 3 | COG3290 | Signal transduction histidine kinase regulating citrate/malate metabolism |
| 1 | COG3300 | MHYT domain (predicted integral membrane sensor domain) |
| 1 | COG3604 | Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
| 2 | COG3678 | P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein |
| 2 | COG3829 | Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
| 2 | COG3850 | Signal transduction histidine kinase, nitrate/nitrite-specific |
| 3 | COG4565 | Response regulator of citrate/malate metabolism |
| 1 | COG4566 | Response regulator |
| Included Genes in salmonellatyphimuriumlt2_lt2sgsc1412atcc700720 : T |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| AE006468_501001 | AAL19401.1 | 34690 | COG0271 | Stress-induced morphogen (activity unknown) | morphogene; putative regulator of murein genes (BolA family) |
| AE006468_3102880 | AAL21836.1 | 32745 | COG0317 | Guanosine polyphosphate pyrophosphohydrolases/synthetases | (p)ppGpp synthetase I |
| AE006468_3934070 | AAL22601.1 | 32745 | COG0317 | Guanosine polyphosphate pyrophosphohydrolases/synthetases | (p)ppGpp synthetase II |
| AE006468_1746131 | AAL20570.1 | 6908 | COG0589 | Universal stress protein UspA and related nucleotide-binding proteins | putative universal stress protein |
| AE006468_2022854 | AAL20843.1 | 6908 | COG0589 | Universal stress protein UspA and related nucleotide-binding proteins | putative universal stress protein |
| AE006468_3760855 | AAL22451.1 | 6908 | COG0589 | Universal stress protein UspA and related nucleotide-binding proteins | universal stress protein A |
| AE006468_677372 | AAL19565.1 | 6908 | COG0589 | Universal stress protein UspA and related nucleotide-binding proteins | putative universal stress protein UspA and related nucleotide-binding protein |
| AE006468_2932359 | AAL21669.1 | 16786 | COG0642 | Signal transduction histidine kinase | tricarboxylic transport regulatory protein |
| AE006468_3341454 | AAL22052.1 | 16786 | COG0642 | Signal transduction histidine kinase | putative sensory histidine kinase in regulatory system |
| AE006468_4269746 | AAL22899.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | response reguator in two-component regulatory system with CpxA |
| AE006468_4533719 | AAL23116.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | response regulator in two-component regulatory system with BasS |
| AE006468_2224537 | AAL21035.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | response regulator in two-component regulatory system with BaeS |
| AE006468_2933761 | AAL21670.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | tricarboxylic transport regulatory protein |
| AE006468_4024667 | AAL22683.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | response regulator in multi-component regualtory system wtih TorS (sensory kinase) and TorT (periplasmic sensor) |
| AE006468_1183637 | AAL20028.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | Copper resistance transcriptional regulatory protein |
| AE006468_1318689 | AAL20160.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | response regulator in two-component regulatory system with PhoQ |
| AE006468_4855370 | AAL23413.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | response regulator (OmpR family) in two-component regulatory system with ArcB (or CpxA) |
| AE006468_450795 | AAL19351.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | response regulator in two-component regulatory system with PhoR (or CreC) |
| AE006468_3659606 | AAL22364.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | response regulator in two-component regulatory system with EnvZ |
| AE006468_766339 | AAL19646.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | response regulator in two-component regulatory system with KdpD |
| AE006468_1551289 | AAL20394.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | response regulator in two-component regulatory system with RstB (OmpR family) |
| AE006468_4844233 | AAL23403.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | response regulator in two-component regulatory system with CreC |
| AE006468_3340798 | AAL22051.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | putative transcriptional regulator |
| AE006468_2012283 | AAL20832.1 | 27701 | COG0784 | FOG: CheY-like receiver | chemotaxis regulator protein |
| AE006468_2464491 | AAL21255.1 | 32448 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | histidine transport protein |
| AE006468_2465511 | AAL21256.1 | 32448 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | lysine/arginine/ornithine transport protein |
| AE006468_4595404 | AAL23174.1 | 32448 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | putative arginine-binding periplasmic protein |
| AE006468_2043190 | AAL20866.1 | 32448 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | putative periplasmic binding transport protein |
| AE006468_728909 | AAL19616.1 | 32448 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | glutamate/aspartate transporter |
| AE006468_896264 | AAL19766.1 | 32448 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | glutamine high-affinity transporter |
| AE006468_4790082 | AAL23351.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein I |
| AE006468_3314324 | AAL22026.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | putative methyl-accepting chemotaxis protein |
| AE006468_3380802 | AAL22089.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | putative methyl-accepting chemotaxis protein |
| AE006468_3744842 | AAL22437.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting transmembrane citrate/phenol chemoreceptor |
| AE006468_1715879 | AAL20544.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein III |
| AE006468_2014756 | AAL20835.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl accepting chemotaxis protein II |
| AE006468_4217384 | AAL22848.1 | 1836 | COG1217 | Predicted membrane GTPase involved in stress response | GTP-binding elongation factor family protein |
| AE006468_1782586 | AAL20608.1 | 31616 | COG1221 | Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain | transcription activator |
| AE006468_416087 | AAL19321.1 | 31616 | COG1221 | Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain | regulator for prp operon (EBP family) |
| AE006468_4792067 | AAL23352.1 | 4661 | COG1221 | Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain | putative NtrC family transcriptional regulator, ATPase domain |
| AE006468_733236 | AAL19620.1 | 1322 | COG1702 | Phosphate starvation-inducible protein PhoH, predicted ATPase | putative phosphate starvation-inducible protein, ATP-binding |
| AE006468_1214315 | AAL20057.1 | 1322 | COG1702 | Phosphate starvation-inducible protein PhoH, predicted ATPase | PhoB-dependent ATP-binding pho regulon component |
| AE006468_3983948 | AAL22642.1 | 4753 | COG1762 | Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) | putative phosphotransferase system mannitol/fructose-specific IIA domain containing protein |
| AE006468_1705470 | AAL20534.1 | 4753 | COG1762 | Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) | putative sugar specific PTS enzyme II |
| AE006468_3486271 | AAL22191.1 | 4753 | COG1762 | Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) | sugar specific PTS family enzyme IIA |
| AE006468_2456687 | AAL21245.1 | 4753 | COG1762 | Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) | putative phosphotransferase system |
| AE006468_4626961 | AAL23205.1 | 4753 | COG1762 | Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) | putative PTS enzyme IIsga subunit |
| AE006468_661274 | AAL19551.1 | 10807 | COG1966 | Carbon starvation protein, predicted membrane protein | carbon starvation protein |
| AE006468_4787565 | AAL23350.1 | 10807 | COG1966 | Carbon starvation protein, predicted membrane protein | putative carbon starvation protein |
| AE006468_2330961 | AAL21132.1 | 10340 | COG1974 | SOS-response transcriptional repressors (RecA-mediated autopeptidases) | putative peptidase |
| AE006468_2081163 | AAL20908.1 | 10340 | COG1974 | SOS-response transcriptional repressors (RecA-mediated autopeptidases) | error-prone repair: SOS-response transcriptional repressor |
| AE006468_3990554 | AAL22648.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | response regulator (repressor) in two-component regulatory system wtih UhpB |
| AE006468_1866071 | AAL20682.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | response regulator in two-component regulatory system with NarX (or NarQ) |
| AE006468_2346702 | AAL21148.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | response regulator in two-component regulatory system with NarQ (or NarX) |
| AE006468_1476167 | AAL20315.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | secretion system regulator: transcriptonal activator |
| AE006468_610256 | AAL19503.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | fimbrial protein Z |
| AE006468_2038247 | AAL20859.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | putative LuxR/UhpA family response regulator |
| AE006468_2369994 | AAL21171.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | LuxR/UhpA family response regulator in two-component regulatory system with RcsC |
| AE006468_1796542 | AAL20621.1 | 32564 | COG2199 | FOG: GGDEF domain | putative PAS/PAC domain protein |
| AE006468_3382755 | AAL22090.1 | 32245 | COG2202 | FOG: PAS/PAC domain | aerotaxis sensor receptor |
| AE006468_4389839 | AAL23002.1 | 31616 | COG2204 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | response regulator in two-component reguatory system with HydH |
| AE006468_2507261 | AAL21296.1 | 31616 | COG2204 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | activator protein |
| AE006468_2704074 | AAL21456.1 | 31616 | COG2204 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | putative transcriptional regulator of two-component regulator protein |
| AE006468_4212857 | AAL22844.1 | 31616 | COG2204 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | EBP family response regulator in two-component regulatory system with GlnL |
| AE006468_4549893 | AAL23128.1 | 23322 | COG3290 | Signal transduction histidine kinase regulating citrate/malate metabolism | sensory histidine kinase in two-component retgulatory system with DcuR |
| AE006468_688027 | AAL19576.1 | 23322 | COG3290 | Signal transduction histidine kinase regulating citrate/malate metabolism | sensory histidine kinase in two-component regulatory system with DpiA |
| AE006468_61794 | AAL19017.1 | 23322 | COG3290 | Signal transduction histidine kinase regulating citrate/malate metabolism | putative transcription regulator |
| AE006468_3557926 | AAL22257.1 | 32564 | COG3300 | MHYT domain (predicted integral membrane sensor domain) | putative membrane domain protein involved in signal transduction |
| AE006468_2983365 | AAL21719.1 | 31616 | COG3604 | Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains | putative EBP family regulator |
| AE006468_1388557 | AAL20233.1 | 14238 | COG3678 | P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein | periplasmic protein related to spheroblast formation |
| AE006468_4270595 | AAL22900.1 | 14238 | COG3678 | P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein | periplasmic repressor of cpx regulon by interaction with CpxA |
| AE006468_714545 | AAL19603.1 | 31616 | COG3829 | Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains | putative sigma-54 dependent transcriptional regulator |
| AE006468_2472873 | AAL21262.1 | 31616 | COG3829 | Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains | putative regulatory protein |
| AE006468_1864282 | AAL20681.1 | 18849 | COG3850 | Signal transduction histidine kinase, nitrate/nitrite-specific | sensory histidine kinase in two component regulatory system with NarL |
| AE006468_2591762 | AAL21374.1 | 18849 | COG3850 | Signal transduction histidine kinase, nitrate/nitrite-specific | sensory histidine kinase in two-component regulatory system with NarP ( NarL) |
| AE006468_689657 | AAL19577.1 | 27701 | COG4565 | Response regulator of citrate/malate metabolism | response regulator in two-component regulatory system with DpiB |
| AE006468_61106 | AAL19016.1 | 27701 | COG4565 | Response regulator of citrate/malate metabolism | putative transcription regulator sensor for citrate |
| AE006468_4549177 | AAL23127.1 | 27701 | COG4565 | Response regulator of citrate/malate metabolism | response regulator in two-component regulatory system with DcuS |
| AE006468_1473102 | AAL20311.1 | 27701 | COG4566 | Response regulator | tetrathionate reductase complex: response regulator |
