| All COGs for escherichiacolio157h7_rimd0509952 : T |
| Genes (#) | COG | COG description |
| 1 | COG0271 | Stress-induced morphogen (activity unknown) |
| 2 | COG0317 | Guanosine polyphosphate pyrophosphohydrolases/synthetases |
| 2 | COG0394 | Protein-tyrosine-phosphatase |
| 5 | COG0589 | Universal stress protein UspA and related nucleotide-binding proteins |
| 4 | COG0642 | Signal transduction histidine kinase |
| 15 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
| 1 | COG0784 | FOG: CheY-like receiver |
| 7 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
| 4 | COG0840 | Methyl-accepting chemotaxis protein |
| 1 | COG1217 | Predicted membrane GTPase involved in stress response |
| 2 | COG1221 | Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain |
| 2 | COG1702 | Phosphate starvation-inducible protein PhoH, predicted ATPase |
| 4 | COG1734 | DnaK suppressor protein |
| 7 | COG1762 | Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
| 2 | COG1966 | Carbon starvation protein, predicted membrane protein |
| 9 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
| 3 | COG2199 | FOG: GGDEF domain |
| 1 | COG2200 | FOG: EAL domain |
| 1 | COG2202 | FOG: PAS/PAC domain |
| 3 | COG2204 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
| 2 | COG2337 | Growth inhibitor |
| 2 | COG3275 | Putative regulator of cell autolysis |
| 2 | COG3279 | Response regulator of the LytR/AlgR family |
| 2 | COG3290 | Signal transduction histidine kinase regulating citrate/malate metabolism |
| 3 | COG3604 | Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
| 2 | COG3678 | P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein |
| 1 | COG3829 | Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
| 2 | COG3850 | Signal transduction histidine kinase, nitrate/nitrite-specific |
| 2 | COG3851 | Signal transduction histidine kinase, glucose-6-phosphate specific |
| 2 | COG4565 | Response regulator of citrate/malate metabolism |
| Included Genes in escherichiacolio157h7_rimd0509952 : T |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| BA000007_520492 | BAB33912.1 | 34690 | COG0271 | Stress-induced morphogen (activity unknown) | putative regulator of murein genes |
| BA000007_3633816 | BAB37067.1 | 32745 | COG0317 | Guanosine polyphosphate pyrophosphohydrolases/synthetases | (p)ppGpp synthetase I |
| BA000007_4566262 | BAB37948.1 | 32745 | COG0317 | Guanosine polyphosphate pyrophosphohydrolases/synthetases | (p)ppGpp synthetase II |
| BA000007_2811030 | BAB36289.1 | 22782 | COG0394 | Protein-tyrosine-phosphatase | probable protein-tyrosine-phosphatase |
| BA000007_1223361 | BAB34561.1 | 22782 | COG0394 | Protein-tyrosine-phosphatase | putative phosphatase |
| BA000007_4913252 | BAB38271.1 | 6908 | COG0589 | Universal stress protein UspA and related nucleotide-binding proteins | putative regulator |
| BA000007_2580905 | BAB36026.1 | 6908 | COG0589 | Universal stress protein UspA and related nucleotide-binding proteins | putative regulator |
| BA000007_4374423 | BAB37790.1 | 6908 | COG0589 | Universal stress protein UspA and related nucleotide-binding proteins | universal stress protein UspA |
| BA000007_1972708 | BAB35420.1 | 6908 | COG0589 | Universal stress protein UspA and related nucleotide-binding proteins | putative filament protein |
| BA000007_722793 | BAB34069.1 | 6908 | COG0589 | Universal stress protein UspA and related nucleotide-binding proteins | hypothetical protein |
| BA000007_3910431 | BAB37332.1 | 16786 | COG0642 | Signal transduction histidine kinase | hypothetical protein |
| BA000007_3909913 | BAB37331.1 | 16786 | COG0642 | Signal transduction histidine kinase | hypothetical protein |
| BA000007_2661333 | BAB36129.1 | 18097 | COG0642 | Signal transduction histidine kinase | putative 2-component sensor protein |
| BA000007_675982 | BAB34031.1 | 18097 | COG0642 | Signal transduction histidine kinase | putative 2-component sensor protein |
| BA000007_479123 | BAB33872.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | positive response regulator for pho regulon PhoB |
| BA000007_677420 | BAB34032.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | putative 2-component transcriptional regulator |
| BA000007_2839710 | BAB36310.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | transcriptional response regulatory protein |
| BA000007_4904932 | BAB38261.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | transcriptional regulator in 2-component system CpxR |
| BA000007_5159573 | BAB38490.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | putative regulatory protein |
| BA000007_5492805 | BAB38779.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | catabolic regulation response regulator |
| BA000007_4248059 | BAB37670.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | response regulator OmpR |
| BA000007_3909257 | BAB37330.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | putative 2-component transcriptional regulator |
| BA000007_2281951 | BAB35737.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | response transcriptional regulatory protein RstB sensor |
| BA000007_2662691 | BAB36130.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | putative 2-component transcriptional regulator |
| BA000007_5187731 | BAB38518.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | 2-component regulatory system regulatory protein BasR |
| BA000007_5496388 | BAB38782.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | negative response regulator of genes in aerobic pathways ArcA |
| BA000007_1611501 | BAB35025.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | transcriptional regulatory protein |
| BA000007_1235615 | BAB34573.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | response transcriptional regulator for torA |
| BA000007_799483 | BAB34145.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | transcriptional regulator of kdp operon |
| BA000007_2568978 | BAB36015.1 | 27701 | COG0784 | FOG: CheY-like receiver | chemotaxis protein CheY |
| BA000007_3153180 | BAB36617.1 | 32448 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | lysine-, arginine-, ornithine-binding periplasmic protein |
| BA000007_768199 | BAB34117.1 | 32448 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | putative periplasmic binding transport protein |
| BA000007_1028441 | BAB34366.1 | 32448 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | arginine 3rd transport system periplasmic binding protein |
| BA000007_2621855 | BAB36082.1 | 32448 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | putative periplasmic binding transport protein |
| BA000007_3152177 | BAB36616.1 | 32448 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | histidine transport system histidine-binding periplasmic protein |
| BA000007_971564 | BAB34312.1 | 32448 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | permease of periplasmic glutamine-binding protein |
| BA000007_1030854 | BAB34369.1 | 32448 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | arginine 3rd transport system periplasmic binding protein |
| BA000007_2571313 | BAB36018.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein IV |
| BA000007_2572960 | BAB36019.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein II |
| BA000007_5450007 | BAB38738.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein I |
| BA000007_2009979 | BAB35449.1 | 32245 | COG0840 | Methyl-accepting chemotaxis protein | methyl-accepting chemotaxis protein III |
| BA000007_4854206 | BAB38216.1 | 1836 | COG1217 | Predicted membrane GTPase involved in stress response | putative GTP-binding factor |
| BA000007_1874754 | BAB35303.1 | 31616 | COG1221 | Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain | psp operon transcriptional activator |
| BA000007_403556 | BAB33807.1 | 31616 | COG1221 | Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain | regulator for prp operon |
| BA000007_772499 | BAB34121.1 | 1322 | COG1702 | Phosphate starvation-inducible protein PhoH, predicted ATPase | putative ATP-binding protein in pho regulon |
| BA000007_1327943 | BAB34689.1 | 1322 | COG1702 | Phosphate starvation-inducible protein PhoH, predicted ATPase | ATP-binding pho regulon component PhoH |
| BA000007_2939294 | BAB36429.1 | 22960 | COG1734 | DnaK suppressor protein | putative C4-type zinc finger protein |
| BA000007_1250884 | BAB34593.1 | 22960 | COG1734 | DnaK suppressor protein | C4-type zinc finger protein (TraR family) |
| BA000007_1307284 | BAB34673.1 | 22960 | COG1734 | DnaK suppressor protein | C4-type zinc finger protein (TraR family) |
| BA000007_893721 | BAB34228.1 | 22960 | COG1734 | DnaK suppressor protein | hypothetical C4-type zinc finger protein TraR-family |
| BA000007_5275435 | BAB38594.1 | 4753 | COG1762 | Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) | putative PTS system enzyme IIA component |
| BA000007_4088931 | BAB37506.1 | 4753 | COG1762 | Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) | phosphotransferase system enzyme IIA |
| BA000007_4891001 | BAB38249.1 | 4753 | COG1762 | Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) | fructose-specific PTS system enzyme IIA component |
| BA000007_3819498 | BAB37232.1 | 4753 | COG1762 | Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) | mannitol-specific PTS system enzyme II component |
| BA000007_4354564 | BAB37773.1 | 4753 | COG1762 | Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) | putative phosphotransferase system enzyme IIA |
| BA000007_4946602 | BAB38299.1 | 6058 | COG1762 | Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) | PEP-protein phosphotransferase system enzyme I |
| BA000007_3230124 | BAB36686.1 | 6058 | COG1762 | Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) | putative PTS system enzyme IIA component |
| BA000007_711364 | BAB34060.1 | 10807 | COG1966 | Carbon starvation protein, predicted membrane protein | carbon starvation protein |
| BA000007_5446793 | BAB38736.1 | 10807 | COG1966 | Carbon starvation protein, predicted membrane protein | putative carbon starvation protein |
| BA000007_445302 | BAB33841.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | putative transcription regulator |
| BA000007_3049164 | BAB36529.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | positive response regulator for colanic capsule biosynthesis |
| BA000007_3211892 | BAB36671.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | putative positive transcription regulator |
| BA000007_3717102 | BAB37135.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | hypothetical protein |
| BA000007_4637268 | BAB38029.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | response regulator UhpA |
| BA000007_2616974 | BAB36075.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | putative 2-component transcriptional regulator |
| BA000007_3024229 | BAB36505.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | nitrate/nitrite response regulator NarP |
| BA000007_656307 | BAB34020.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | fimbrial Z protein |
| BA000007_1720525 | BAB35149.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | nitrate/nitrite response regulator protein NarL |
| BA000007_2085724 | BAB35517.1 | 23018 | COG2199 | FOG: GGDEF domain | oxygen sensing protein |
| BA000007_2472122 | BAB35917.1 | 4798 | COG2199 | FOG: GGDEF domain | hypothetical protein |
| BA000007_1335827 | BAB34694.1 | 4798 | COG2199 | FOG: GGDEF domain | hypothetical protein |
| BA000007_2084576 | BAB35516.1 | 23018 | COG2200 | FOG: EAL domain | oxygen sensing protein |
| BA000007_3957087 | BAB37377.1 | 32245 | COG2202 | FOG: PAS/PAC domain | aerotaxis sensor receptor |
| BA000007_4849780 | BAB38213.1 | 31616 | COG2204 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | response regulator for gln GlnG |
| BA000007_5012124 | BAB38350.1 | 31616 | COG2204 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | response regulator HydG |
| BA000007_3407835 | BAB36843.1 | 31616 | COG2204 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | putative 2-component transcriptional regulator |
| BA000007_3633155 | BAB37065.1 | 2091 | COG2337 | Growth inhibitor | PemK-like cell growth regulatory protein ChpA |
| BA000007_5304172 | BAB38626.1 | 2091 | COG2337 | Growth inhibitor | probable growth inhibitor |
| BA000007_2893951 | BAB36360.1 | 10507 | COG3275 | Putative regulator of cell autolysis | putative 2-component sensor protein |
| BA000007_3226805 | BAB36683.1 | 10507 | COG3275 | Putative regulator of cell autolysis | putative sensor protein |
| BA000007_2893235 | BAB36359.1 | 33796 | COG3279 | Response regulator of the LytR/AlgR family | hypothetical protein |
| BA000007_3228517 | BAB36684.1 | 33796 | COG3279 | Response regulator of the LytR/AlgR family | putative 2-component transcriptional regulator |
| BA000007_5204481 | BAB38530.1 | 23322 | COG3290 | Signal transduction histidine kinase regulating citrate/malate metabolism | two-component sensor protein DcuS |
| BA000007_733590 | BAB34081.1 | 23322 | COG3290 | Signal transduction histidine kinase regulating citrate/malate metabolism | putative sensor-type protein |
| BA000007_3328064 | BAB36776.1 | 11670 | COG3604 | Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains | putative 2-component regulator |
| BA000007_3578022 | BAB37010.1 | 11670 | COG3604 | Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains | formate hydrogenlyase activator protein |
| BA000007_3554698 | BAB36988.1 | 31616 | COG3604 | Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains | putative 2-component transcriptional regulator |
| BA000007_2424653 | BAB35872.1 | 14238 | COG3678 | P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein | spheroplast protein Y |
| BA000007_4905777 | BAB38262.1 | 14238 | COG3678 | P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein | hypothetical protein |
| BA000007_3742339 | BAB37165.1 | 31616 | COG3829 | Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains | putative transcriptional regulator |
| BA000007_3301855 | BAB36754.1 | 18849 | COG3850 | Signal transduction histidine kinase, nitrate/nitrite-specific | nitrate/nitrite sensor protein narQ |
| BA000007_1721168 | BAB35150.1 | 18849 | COG3850 | Signal transduction histidine kinase, nitrate/nitrite-specific | nitrate/nitrite sensor protein NarX |
| BA000007_443761 | BAB33840.1 | 14182 | COG3851 | Signal transduction histidine kinase, glucose-6-phosphate specific | putative sensor histidine protein kinase |
| BA000007_4635766 | BAB38028.1 | 14182 | COG3851 | Signal transduction histidine kinase, glucose-6-phosphate specific | sensor histidine protein kinase UhpB |
| BA000007_5203765 | BAB38529.1 | 27701 | COG4565 | Response regulator of citrate/malate metabolism | two-component transcriptional regulator DcuR |
| BA000007_735217 | BAB34082.1 | 27701 | COG4565 | Response regulator of citrate/malate metabolism | putative response regulator protein CitB |
| Excluded Genes in escherichiacolio157h7_rimd0509952 : T |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| BA000007_897013 | BAB34236.1 | 21142 | COG0639 | Diadenosine tetraphosphatase and related serine/threonine protein phosphatases | serine/threonin protein phosphatase |
| BA000007_2524144 | BAB35971.1 | 21142 | COG0639 | Diadenosine tetraphosphatase and related serine/threonine protein phosphatases | phosphoprotein phosphatase 1 |
| BA000007_3488382 | BAB36925.1 | 21142 | COG0639 | Diadenosine tetraphosphatase and related serine/threonine protein phosphatases | putative serine/threonine protein phosphatase |
| BA000007_3583444 | BAB37013.1 | 21142 | COG0639 | Diadenosine tetraphosphatase and related serine/threonine protein phosphatases | protein phosphatase 2 |
| BA000007_301939 | BAB33697.1 | 30788 | COG1974 | SOS-response transcriptional repressors (RecA-mediated autopeptidases) | repressor protein CI |
| BA000007_1256912 | BAB34608.1 | 30788 | COG1974 | SOS-response transcriptional repressors (RecA-mediated autopeptidases) | putative cI repressor protein |
| BA000007_2199277 | BAB35632.1 | 30788 | COG1974 | SOS-response transcriptional repressors (RecA-mediated autopeptidases) | putative repressor protein |
| BA000007_2706203 | BAB36189.1 | 30788 | COG1974 | SOS-response transcriptional repressors (RecA-mediated autopeptidases) | putative repressor protein |
| BA000007_2932759 | BAB36413.1 | 30788 | COG1974 | SOS-response transcriptional repressors (RecA-mediated autopeptidases) | putative prophage repressor CI |
| BA000007_2500226 | BAB35947.1 | 4432 | COG2200 | FOG: EAL domain | hypothetical protein |
| BA000007_3005656 | BAB36491.1 | 4432 | COG2200 | FOG: EAL domain | hypothetical protein |
| BA000007_1337361 | BAB34695.1 | 4432 | COG2200 | FOG: EAL domain | Rtn-like protein |
| BA000007_1416473 | BAB34779.1 | 555 | COG2310 | Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 | putative tellurium resistance TerE |
| BA000007_1412498 | BAB34774.1 | 555 | COG2310 | Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 | putative tellurium resistance protein TerZ |
| BA000007_1415826 | BAB34778.1 | 555 | COG2310 | Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 | putative tellurium resistance protein TerD |
| BA000007_543132 | BAB33933.1 | 4432 | COG4943 | Predicted signal transduction protein containing sensor and EAL domains | hypothetical protein |
| BA000007_5128617 | BAB38466.1 | 4432 | COG4943 | Predicted signal transduction protein containing sensor and EAL domains | hypothetical protein |
