| Included Genes in clostridiumacetobutylicum_atcc824 : T |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| AE001437_46266 | AAK78022.1 | 480 | COG0631 | Serine/threonine protein phosphatase | Serine/threonine phosphatase (inactivated protein) |
| AE001437_1875972 | AAK79693.1 | 480 | COG0631 | Serine/threonine protein phosphatase | Protein serine/threonine phosphatases, PP2C family (YLOO B.subtilis ortholog) |
| AE001437_471526 | AAK78387.1 | 480 | COG0631 | Serine/threonine protein phosphatase | PP2C phosphatase family |
| AE001437_378192 | AAK78304.1 | 16197 | COG0642 | Signal transduction histidine kinase | Sensory transduction histidine kinase |
| AE001437_3367910 | AAK81155.1 | 17164 | COG0642 | Signal transduction histidine kinase | Membrane associated histidine kinase with HAMP domain |
| AE001437_2891966 | AAK80705.1 | 17164 | COG0642 | Signal transduction histidine kinase | Membrane-associated sensory histidine kinase with HAMP domain |
| AE001437_1695242 | AAK79520.1 | 17164 | COG0642 | Signal transduction histidine kinase | Membrane associated sensory transduction histidine kinase (with HAMP domain) |
| AE001437_1851064 | AAK79667.1 | 17164 | COG0642 | Signal transduction histidine kinase | Sensory histidine kinase (with HAMP and PAS domains) |
| AE001437_370955 | AAK78298.1 | 17164 | COG0642 | Signal transduction histidine kinase | Sensory transduction histidine kinase |
| AE001437_2551088 | AAK80388.1 | 17164 | COG0642 | Signal transduction histidine kinase | Membrane associatehistidine kinase with HAMP domain |
| AE001437_249648 | AAK78206.1 | 22069 | COG0642 | Signal transduction histidine kinase | Sensory transduction histidine kinase |
| AE001437_1659654 | AAK79484.1 | 22069 | COG0642 | Signal transduction histidine kinase | Membrane associated sensory transduction histidine kinase |
| AE001437_434395 | AAK78352.1 | 22069 | COG0642 | Signal transduction histidine kinase | Sensory transduction histidine kinase (HisKA and HATPase damains) |
| AE001437_128492 | AAK78103.1 | 26799 | COG0643 | Chemotaxis protein histidine kinase and related kinases | Chemotaxis protein cheA |
| AE001437_2309755 | AAK80177.1 | 26799 | COG0643 | Chemotaxis protein histidine kinase and related kinases | Chemotaxis histidine kinase, CheA (contains CheW-like adaptor domain) |
| AE001437_328308 | AAK78270.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | Response regulator (CheY domain, HTH domain) |
| AE001437_433681 | AAK78351.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | Response regulator (CheY-like domain and HTH domain) |
| AE001437_517926 | AAK78430.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | Response regulator (CheY-like and HTH domains) |
| AE001437_961417 | AAK78806.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | Response regulator |
| AE001437_1694562 | AAK79519.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | Response regulator (CheY-like receiver domain and HTH DNA-binding domain) |
| AE001437_3369337 | AAK81156.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain) |
| AE001437_3865664 | AAK81585.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain) |
| AE001437_652910 | AAK78543.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | Response regulator (REC, HTH domains) |
| AE001437_2552563 | AAK80389.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | Response regulator (CheY-like domain and HTH-type DNA-binding domain) |
| AE001437_3878027 | AAK81598.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | KDP operon transcriptional regulatory protein KdpE (CheY-like receiver domain and HTH-type DNA-binding domain) |
| AE001437_3715608 | AAK81443.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain) |
| AE001437_2891279 | AAK80704.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | Response regulator (CheY receiver domain and HTH-type DNA-binding domain) |
| AE001437_2860499 | AAK80681.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | Response regulator (CheY-like receiver domain and HTH-type DNA-binding) |
| AE001437_1658951 | AAK79483.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | Response regulator (CheY-like receiver domain and HTH DNA-binding domain) |
| AE001437_990196 | AAK78836.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | Two-component response regulator |
| AE001437_248980 | AAK78205.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | Response regulator (CheY-like receiver domain and HTH DNA-binding domain) |
| AE001437_375646 | AAK78302.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | Response regulator (CheY-like domain, HTH domain) |
| AE001437_604412 | AAK78503.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | Response regulator (CheY-like and HTH domains) |
| AE001437_758945 | AAK78630.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | Response regulator (CheY-like receiver domain and HTH DNA binding domain) |
| AE001437_1650171 | AAK79473.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | Response regulator (CheY-like receiver domain and a HTH) |
| AE001437_1850364 | AAK79666.1 | 27701 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | Response regulator (CheY-like receiver domain and DNA-binding HTH domain) |
| AE001437_128104 | AAK78102.1 | 27701 | COG0784 | FOG: CheY-like receiver | protein cheY homolog |
| AE001437_2524596 | AAK80362.1 | 27701 | COG0784 | FOG: CheY-like receiver | CheY-like receiver domain of response regulator |
| AE001437_133639 | AAK78107.1 | 27701 | COG0784 | FOG: CheY-like receiver | Chemotaxis respons regulator (cheY) |
| AE001437_2308763 | AAK80175.1 | 27701 | COG0784 | FOG: CheY-like receiver | Chemotaxis signal receiving protein CheY |
| AE001437_1009663 | AAK78856.1 | 32448 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | Periplasmic amino acid binding protein |
| AE001437_3496696 | AAK81257.1 | 32448 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | Periplasmic amino acid binding protein |
| AE001437_3822729 | AAK81543.1 | 32448 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | Amino acid (probably glutamine) ABC transporter, periplasmic binding protein component |
| AE001437_442633 | AAK78360.1 | 32448 | COG0834 | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | Periplasmic amino acid-binding protein |
| AE001437_130495 | AAK78104.1 | 19815 | COG0835 | Chemotaxis signal transduction protein | Chemotaxis protein cheW |
| AE001437_2308295 | AAK80174.1 | 19815 | COG0835 | Chemotaxis signal transduction protein | Chemotaxis signal transduction protein CheW |
| AE001437_2314190 | AAK80181.1 | 19815 | COG0835 | Chemotaxis signal transduction protein | Chemotaxis protein CheW |
| AE001437_2873988 | AAK80692.1 | 19071 | COG0840 | Methyl-accepting chemotaxis protein | Membrane associated methyl-accepting chemotaxis protein (with HAMP domain) |
| AE001437_3676745 | AAK81403.1 | 19071 | COG0840 | Methyl-accepting chemotaxis protein | Methyl-accepting chemotaxis protein |
| AE001437_3707576 | AAK81437.1 | 19071 | COG0840 | Methyl-accepting chemotaxis protein | Membrane associated methyl-accepting chemotaxis protein with HAMP domain |
| AE001437_2895875 | AAK80708.1 | 19071 | COG0840 | Methyl-accepting chemotaxis protein | Membrane assosiated methyl-accepting chemotaxis protein with HAMP domain |
| AE001437_1722695 | AAK79546.1 | 19071 | COG0840 | Methyl-accepting chemotaxis protein | Methyl-accepting chemotaxis-like protein (chemotaxis sensory transducer) |
| AE001437_630916 | AAK78521.1 | 19071 | COG0840 | Methyl-accepting chemotaxis protein | Methyl-accepting chemotaxis protein |
| AE001437_1528839 | AAK79355.1 | 19071 | COG0840 | Methyl-accepting chemotaxis protein | Membrane associated chemotaxis sensory transducer protein (MSP domain and HAMP domain) |
| AE001437_510524 | AAK78423.1 | 24115 | COG0840 | Methyl-accepting chemotaxis protein | Methyl-accepting chemotaxis protein |
| AE001437_3580995 | AAK81327.1 | 24115 | COG0840 | Methyl-accepting chemotaxis protein | Membrane associated methyl-accepting chemotaxis protein (with HAMP domain) |
| AE001437_2906283 | AAK80718.1 | 24115 | COG0840 | Methyl-accepting chemotaxis protein | Methyl-accepting chemotaxis protein with HAMP domain |
| AE001437_279643 | AAK78231.1 | 7319 | COG0840 | Methyl-accepting chemotaxis protein | Methyl-accepting chemotaxis protein |
| AE001437_1040611 | AAK78885.1 | 7319 | COG0840 | Methyl-accepting chemotaxis protein | Methyl-accepting chemotaxis protein, contain HAMP domain |
| AE001437_2720374 | AAK80564.1 | 7319 | COG0840 | Methyl-accepting chemotaxis protein | Membrane associated methyl-chemotaxis protein, HAMP domain containing |
| AE001437_3705037 | AAK81436.1 | 7319 | COG0840 | Methyl-accepting chemotaxis protein | Membrane associated methyl-accepting chemotaxis protein (with HAMP domain) |
| AE001437_2654663 | AAK80498.1 | 7319 | COG0840 | Methyl-accepting chemotaxis protein | Possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain |
| AE001437_930520 | AAK78781.1 | 7319 | COG0840 | Methyl-accepting chemotaxis protein | Methyl-accepting chemotaxis protein |
| AE001437_443742 | AAK78361.1 | 8402 | COG0840 | Methyl-accepting chemotaxis protein | Methyl-accepting chemotaxis protein |
| AE001437_3740504 | AAK81470.1 | 8402 | COG0840 | Methyl-accepting chemotaxis protein | Methyl-accepting chemotaxis protein |
| AE001437_1666272 | AAK79491.1 | 8402 | COG0840 | Methyl-accepting chemotaxis protein | Methyl-accepting chemotaxis-like domain (chemotaxis sensory transducer) |
| AE001437_1745844 | AAK79568.1 | 8402 | COG0840 | Methyl-accepting chemotaxis protein | Methyl-accepting chemotaxis-like protein (chemotaxis sensory transducer) |
| AE001437_859573 | AAK78717.1 | 8402 | COG0840 | Methyl-accepting chemotaxis protein | Methyl-accepting chemotaxis protein |
| AE001437_1833236 | AAK79650.1 | 1836 | COG1217 | Predicted membrane GTPase involved in stress response | TYPA/BIPA type GTPase |
| AE001437_132669 | AAK78106.1 | 5722 | COG1352 | Methylase of chemotaxis methyl-accepting proteins | Chemotaxis protein methyltransferase (cheR) |
| AE001437_2311849 | AAK80178.1 | 5722 | COG1352 | Methylase of chemotaxis methyl-accepting proteins | Chemotaxis protein methyltransferase, cheR |
| AE001437_469965 | AAK78386.1 | 30941 | COG1716 | FOG: FHA domain | Predicted membrane protein, containing FHA domain |
| AE001437_47106 | AAK78023.1 | 30941 | COG1716 | FOG: FHA domain | Predicted membrane protein, containing FHA domain |
| AE001437_264282 | AAK78214.1 | 4753 | COG1762 | Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) | PTS system, IIA component |
| AE001437_3091364 | AAK80900.1 | 4753 | COG1762 | Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) | PTS system enzyme IIBC component (galactitol/fructose specific) |
| AE001437_1604046 | AAK79423.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | Two-component system regulator (CheY domain and HTH-like DNA-binding domain) |
| AE001437_2353179 | AAK80211.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain) |
| AE001437_3616468 | AAK81359.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain) |
| AE001437_3070820 | AAK80881.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain) |
| AE001437_994813 | AAK78841.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | Two-component response regulator |
| AE001437_271300 | AAK78221.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | Response regulator (CheY-like recever domain and HTH DNA-binding domain) |
| AE001437_197025 | AAK78156.1 | 27701 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | Response regulator, CheY-like receiver domain and HTH DNA-binding domain |
| AE001437_1713331 | AAK79535.1 | 17296 | COG2199 | FOG: GGDEF domain | Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF) |
| AE001437_1711938 | AAK79533.1 | 17296 | COG2199 | FOG: GGDEF domain | Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF) |
| AE001437_2677768 | AAK80526.1 | 26974 | COG2199 | FOG: GGDEF domain | GGDEF domain containing protein, (inactivated) |
| AE001437_2691448 | AAK80536.1 | 26974 | COG2199 | FOG: GGDEF domain | GGDEF domain containing protein |
| AE001437_1032390 | AAK78879.1 | 16197 | COG2202 | FOG: PAS/PAC domain | Sensory transduction histidine kinase |
| AE001437_316245 | AAK78258.1 | 13662 | COG2206 | HD-GYP domain | HD-GYP hydrolase domain containing protein |
| AE001437_548430 | AAK78455.1 | 13662 | COG2206 | HD-GYP domain | HD-GYP domain |
| AE001437_2642771 | AAK80486.1 | 26458 | COG2206 | HD-GYP domain | HD_GYP hydrolase domain fused to HD hydrolase domain |
| AE001437_2968133 | AAK80781.1 | 26458 | COG2206 | HD-GYP domain | Fusion HD-GYP domain and HD-hydrolase domain |
| AE001437_88953 | AAK78066.1 | 33796 | COG3279 | Response regulator of the LytR/AlgR family | Accessory gene regulator protein A |
| AE001437_1814010 | AAK79636.1 | 33796 | COG3279 | Response regulator of the LytR/AlgR family | Response regulator (CheY-like receiver domain and DNA-binding HTH domain) |
| AE001437_1724906 | AAK79548.1 | 33796 | COG3279 | Response regulator of the LytR/AlgR family | Response regulator (CheY-like receiver domain and HTH DNA-binding domain) |
| AE001437_2846301 | AAK80667.1 | 27701 | COG3707 | Response regulator with putative antiterminator output domain | Response regulator (CheY-like reciever domain and HTH-type DNA-binding domain) |
| AE001437_529651 | AAK78439.1 | 31616 | COG3829 | Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains | NtrC family transcriptional regulator (PAS and AAA domains) |
| AE001437_3071487 | AAK80882.1 | 17776 | COG4585 | Signal transduction histidine kinase | Membrane-associated sensory histidine kinase-like ATPase |
| AE001437_993642 | AAK78840.1 | 17776 | COG4585 | Signal transduction histidine kinase | Histidine kinase-like ATPase |
