| All COGs for xylellafastidiosa9a5c : R |
| Genes (#) | COG | COG description |
| 1 | COG0300 | Short-chain dehydrogenases of various substrate specificities |
| 3 | COG0488 | ATPase components of ABC transporters with duplicated ATPase domains |
| 1 | COG0491 | Zn-dependent hydrolases, including glyoxylases |
| 1 | COG0546 | Predicted phosphatases |
| 2 | COG0596 | Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
| 1 | COG0604 | NADPH:quinone reductase and related Zn-dependent oxidoreductases |
| 1 | COG0637 | Predicted phosphatase/phosphohexomutase |
| 3 | COG0655 | Multimeric flavodoxin WrbA |
| 2 | COG0663 | Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
| 3 | COG0705 | Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
| 10 | COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
| 1 | COG1063 | Threonine dehydrogenase and related Zn-dependent dehydrogenases |
| 4 | COG1064 | Zn-dependent alcohol dehydrogenases |
| 2 | COG1073 | Hydrolases of the alpha/beta superfamily |
| 1 | COG1137 | ABC-type (unclassified) transport system, ATPase component |
| 2 | COG2220 | Predicted Zn-dependent hydrolases of the beta-lactamase fold |
| 2 | COG2234 | Predicted aminopeptidases |
| Included Genes in xylellafastidiosa9a5c : R |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| AE003849_147702 | AAF82958.1 | 32843 | COG0300 | Short-chain dehydrogenases of various substrate specificities | oxidoreductase |
| AE003849_2022417 | AAF84932.1 | 35629 | COG0488 | ATPase components of ABC transporters with duplicated ATPase domains | ABC transporter ATP-binding protein |
| AE003849_907231 | AAF83754.1 | 35629 | COG0488 | ATPase components of ABC transporters with duplicated ATPase domains | ABC transporter ATP-binding protein |
| AE003849_2496177 | AAF85414.1 | 35629 | COG0488 | ATPase components of ABC transporters with duplicated ATPase domains | ABC transporter ATP-binding protein |
| AE003849_2049841 | AAF84959.1 | 5682 | COG0491 | Zn-dependent hydrolases, including glyoxylases | hydroxyacylglutathione hydrolase |
| AE003849_2353779 | AAF85268.1 | 8313 | COG0546 | Predicted phosphatases | phosphoglycolate phosphatase |
| AE003849_1303045 | AAF84165.1 | 34277 | COG0596 | Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) | biotin biosynthesis protein |
| AE003849_1874325 | AAF84767.1 | 34277 | COG0596 | Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) | haloalkane dehalogenase |
| AE003849_458451 | AAF83261.1 | 33297 | COG0604 | NADPH:quinone reductase and related Zn-dependent oxidoreductases | conserved hypothetical protein |
| AE003849_1154406 | AAF84011.1 | 8313 | COG0637 | Predicted phosphatase/phosphohexomutase | phosphoglycolate phosphatase |
| AE003849_1094006 | AAF83943.1 | 14504 | COG0655 | Multimeric flavodoxin WrbA | tryptophan repressor binding protein |
| AE003849_1652388 | AAF84542.1 | 14504 | COG0655 | Multimeric flavodoxin WrbA | tryptophan repressor binding protein |
| AE003849_1048033 | AAF83904.1 | 14504 | COG0655 | Multimeric flavodoxin WrbA | tryptophan repressor binding protein |
| AE003849_1896964 | AAF84786.1 | 24136 | COG0663 | Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily | conserved hypothetical protein |
| AE003849_1994975 | AAF84894.1 | 24136 | COG0663 | Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily | carbonic anhydrase |
| AE003849_1014069 | AAF83864.1 | 17498 | COG0705 | Uncharacterized membrane protein (homolog of Drosophila rhomboid) | conserved hypothetical protein |
| AE003849_619605 | AAF83459.1 | 17498 | COG0705 | Uncharacterized membrane protein (homolog of Drosophila rhomboid) | conserved hypothetical protein |
| AE003849_2070975 | AAF84985.1 | 17498 | COG0705 | Uncharacterized membrane protein (homolog of Drosophila rhomboid) | conserved hypothetical protein |
| AE003849_2604406 | AAF85752.1 | 32843 | COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | ketoreductase |
| AE003849_1973850 | AAF84881.1 | 32843 | COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | oxidoreductase |
| AE003849_182075 | AAF82986.1 | 32843 | COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | 3-oxoacyl-[ACP] reductase |
| AE003849_334769 | AAF83130.1 | 32843 | COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | acetoacetyl-CoA reductase |
| AE003849_1403300 | AAF84266.1 | 32843 | COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | pteridine reductase 1 |
| AE003849_1645626 | AAF84535.1 | 32843 | COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | 2,5-dichloro-2,5-cyclohexadiene-1,4-dioldehydrogenase |
| AE003849_2160246 | AAF85068.1 | 32843 | COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | 3-alpha-hydroxysteroid dehydrogenase |
| AE003849_642421 | AAF83481.1 | 32843 | COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | 3-oxoacyl-[ACP] reductase |
| AE003849_879990 | AAF83723.1 | 32843 | COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | tropinone reductase |
| AE003849_1663245 | AAF84553.1 | 32843 | COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | oxidoreductase |
| AE003849_1646577 | AAF84536.1 | 33297 | COG1063 | Threonine dehydrogenase and related Zn-dependent dehydrogenases | NADP-alcohol dehydrogenase |
| AE003849_1665101 | AAF84555.1 | 33297 | COG1064 | Zn-dependent alcohol dehydrogenases | alcohol dehydrogenase |
| AE003849_1652981 | AAF84543.1 | 33297 | COG1064 | Zn-dependent alcohol dehydrogenases | NADP-alcohol dehydrogenase |
| AE003849_1094994 | AAF83946.1 | 33297 | COG1064 | Zn-dependent alcohol dehydrogenases | NADP-alcohol dehydrogenase |
| AE003849_2264709 | AAF85188.1 | 33297 | COG1064 | Zn-dependent alcohol dehydrogenases | alcohol dehydrogenase |
| AE003849_1668885 | AAF84559.1 | 32722 | COG1073 | Hydrolases of the alpha/beta superfamily | conserved hypothetical protein |
| AE003849_1664020 | AAF84554.1 | 32722 | COG1073 | Hydrolases of the alpha/beta superfamily | conserved hypothetical protein |
| AE003849_1359708 | AAF84218.1 | 35629 | COG1137 | ABC-type (unclassified) transport system, ATPase component | ABC transporter ATP-binding protein |
| AE003849_1657690 | AAF84548.1 | 1052 | COG2220 | Predicted Zn-dependent hydrolases of the beta-lactamase fold | outer membrane protein |
| AE003849_1931814 | AAF84826.1 | 1052 | COG2220 | Predicted Zn-dependent hydrolases of the beta-lactamase fold | conserved hypothetical protein |
| AE003849_771787 | AAF83630.1 | 10831 | COG2234 | Predicted aminopeptidases | hypothetical protein |
| AE003849_2585963 | AAF85503.1 | 10831 | COG2234 | Predicted aminopeptidases | hypothetical protein |
| Excluded Genes in xylellafastidiosa9a5c : R |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| AE003849_451421 | AAF83251.1 | 34290 | COG0456 | Acetyltransferases | ribosomal-protein-alanine acetyltransferase |
| AE003849_2383798 | AAF85303.1 | 17277 | COG3378 | Predicted ATPase | phage-related protein |
| AE003849_665624 | AAF83515.1 | 17277 | COG3378 | Predicted ATPase | phage-related protein |
| AE003849_684273 | AAF83537.1 | 33503 | COG3497 | Phage tail sheath protein FI | phage-related contractile tail sheath protein |
| AE003849_2366724 | AAF85283.1 | 33503 | COG3497 | Phage tail sheath protein FI | phage-related contractile tail sheath protein |
| AE003849_685463 | AAF83538.1 | 8595 | COG3498 | Phage tail tube protein FII | phage-related contractile tail tube protein |
| AE003849_2366215 | AAF85282.1 | 8595 | COG3498 | Phage tail tube protein FII | phage-related protein |
| AE003849_688605 | AAF83541.1 | 9982 | COG3499 | Phage protein U | phage-related tail protein |
| AE003849_2363100 | AAF85279.1 | 9982 | COG3499 | Phage protein U | phage-related tail protein |
| AE003849_689293 | AAF83543.1 | 4802 | COG3500 | Phage protein D | phage-related tail protein |
| AE003849_2361812 | AAF85277.1 | 4802 | COG3500 | Phage protein D | phage-related protein |
| AE003849_680903 | AAF83533.1 | 20328 | COG3628 | Phage baseplate assembly protein W | phage-related baseplate assembly protein |
| AE003849_2371010 | AAF85287.1 | 20328 | COG3628 | Phage baseplate assembly protein W | phage-related baseplate assembly protein |
