| All COGs for vibriocholerae_n16961_o1 : R |
| Genes (#) | COG | COG description |
| 2 | COG0110 | Acetyltransferase (isoleucine patch superfamily) |
| 5 | COG0454 | Histone acetyltransferase HPA2 and related acetyltransferases |
| 5 | COG0477 | Permeases of the major facilitator superfamily |
| 4 | COG0488 | ATPase components of ABC transporters with duplicated ATPase domains |
| 4 | COG0491 | Zn-dependent hydrolases, including glyoxylases |
| 2 | COG0493 | NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
| 5 | COG0494 | NTP pyrophosphohydrolases including oxidative damage repair enzymes |
| 1 | COG0517 | FOG: CBS domain |
| 1 | COG0546 | Predicted phosphatases |
| 3 | COG0561 | Predicted hydrolases of the HAD superfamily |
| 2 | COG0596 | Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
| 2 | COG0604 | NADPH:quinone reductase and related Zn-dependent oxidoreductases |
| 3 | COG0637 | Predicted phosphatase/phosphohexomutase |
| 1 | COG0656 | Aldo/keto reductases, related to diketogulonate reductase |
| 2 | COG0730 | Predicted permeases |
| 3 | COG0733 | Na+-dependent transporters of the SNF family |
| 2 | COG1011 | Predicted hydrolase (HAD superfamily) |
| 11 | COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
| 2 | COG1052 | Lactate dehydrogenase and related dehydrogenases |
| 1 | COG1063 | Threonine dehydrogenase and related Zn-dependent dehydrogenases |
| 1 | COG1101 | ABC-type uncharacterized transport system, ATPase component |
| 4 | COG1123 | ATPase components of various ABC-type transport systems, contain duplicated ATPase |
| 1 | COG1137 | ABC-type (unclassified) transport system, ATPase component |
| 3 | COG1253 | Hemolysins and related proteins containing CBS domains |
| 1 | COG1823 | Predicted Na+/dicarboxylate symporter |
| 2 | COG2103 | Predicted sugar phosphate isomerase |
| 2 | COG2358 | TRAP-type uncharacterized transport system, periplasmic component |
| 2 | COG2704 | Anaerobic C4-dicarboxylate transporter |
| 2 | COG3083 | Predicted hydrolase of alkaline phosphatase superfamily |
| 2 | COG3176 | Putative hemolysin |
| 2 | COG3313 | Predicted Fe-S protein |
| 2 | COG3324 | Predicted enzyme related to lactoylglutathione lyase |
| Included Genes in vibriocholerae_n16961_o1 : R |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| AE003853_271933 | AAF96164.1 | 1333 | COG0110 | Acetyltransferase (isoleucine patch superfamily) | antibiotic acetyltransferase |
| AE003853_315311 | AAF96208.1 | 1333 | COG0110 | Acetyltransferase (isoleucine patch superfamily) | chloramphenicol acetyltransferase |
| AE003853_374494 | AAF96306.1 | 21653 | COG0454 | Histone acetyltransferase HPA2 and related acetyltransferases | acetyltransferase, putative |
| AE003853_420656 | AAF96383.1 | 21653 | COG0454 | Histone acetyltransferase HPA2 and related acetyltransferases | acetyltransferase, putative |
| AE003853_424892 | AAF96391.1 | 8663 | COG0454 | Histone acetyltransferase HPA2 and related acetyltransferases | conserved hypothetical protein |
| AE003853_421787 | AAF96385.1 | 8663 | COG0454 | Histone acetyltransferase HPA2 and related acetyltransferases | conserved hypothetical protein |
| AE003853_325890 | AAF96226.1 | 8663 | COG0454 | Histone acetyltransferase HPA2 and related acetyltransferases | conserved hypothetical protein |
| AE003852_1759459 | AAF94785.1 | 13376 | COG0477 | Permeases of the major facilitator superfamily | multidrug resistance protein |
| AE003852_2946786 | AAF95900.1 | 13376 | COG0477 | Permeases of the major facilitator superfamily | multidrug resistance protein |
| AE003852_69296 | AAF93247.1 | 13376 | COG0477 | Permeases of the major facilitator superfamily | multidrug resistance protein, putative |
| AE003852_1709719 | AAF94751.1 | 32899 | COG0477 | Permeases of the major facilitator superfamily | multidrug transporter, putative |
| AE003852_1481602 | AAF94549.1 | 32899 | COG0477 | Permeases of the major facilitator superfamily | multidrug transporter, putative |
| AE003852_1632888 | AAF94674.1 | 35629 | COG0488 | ATPase components of ABC transporters with duplicated ATPase domains | ABC transporter, ATP-binding protein |
| AE003852_746356 | AAF93863.1 | 35629 | COG0488 | ATPase components of ABC transporters with duplicated ATPase domains | ABC transporter, ATP-binding protein |
| AE003852_1591066 | AAF94641.1 | 35629 | COG0488 | ATPase components of ABC transporters with duplicated ATPase domains | ABC transporter, ATP-binding protein |
| AE003852_2777245 | AAF95749.1 | 35629 | COG0488 | ATPase components of ABC transporters with duplicated ATPase domains | ABC transporter, ATP-binding protein |
| AE003853_854462 | AAF96797.1 | 4767 | COG0491 | Zn-dependent hydrolases, including glyoxylases | hypothetical protein |
| AE003853_999865 | AAF96943.1 | 4767 | COG0491 | Zn-dependent hydrolases, including glyoxylases | hypothetical protein |
| AE003852_1345367 | AAF94429.1 | 5682 | COG0491 | Zn-dependent hydrolases, including glyoxylases | glyoxylase II family protein |
| AE003852_2390140 | AAF95380.1 | 5682 | COG0491 | Zn-dependent hydrolases, including glyoxylases | hydroxyacylglutathione hydrolase GloB, putative |
| AE003852_2542134 | AAF95520.1 | 9311 | COG0493 | NADPH-dependent glutamate synthase beta chain and related oxidoreductases | glutamate synthase, small subunit |
| AE003852_2535658 | AAF95517.1 | 9311 | COG0493 | NADPH-dependent glutamate synthase beta chain and related oxidoreductases | glutamate synthase, small subunit |
| AE003852_717080 | AAF93836.1 | 12241 | COG0494 | NTP pyrophosphohydrolases including oxidative damage repair enzymes | MutT/nudix family protein |
| AE003852_2559842 | AAF95535.1 | 12241 | COG0494 | NTP pyrophosphohydrolases including oxidative damage repair enzymes | mutator MutT protein |
| AE003852_2609692 | AAF95578.1 | 32357 | COG0494 | NTP pyrophosphohydrolases including oxidative damage repair enzymes | MutT/nudix family protein |
| AE003852_2895391 | AAF95861.1 | 32357 | COG0494 | NTP pyrophosphohydrolases including oxidative damage repair enzymes | MutT/nudix family protein |
| AE003853_708502 | AAF96662.1 | 32357 | COG0494 | NTP pyrophosphohydrolases including oxidative damage repair enzymes | MutT/nudix family protein |
| AE003853_476605 | AAF96442.1 | 17368 | COG0517 | FOG: CBS domain | formate transporter 1, putative |
| AE003852_2795411 | AAF95765.1 | 8313 | COG0546 | Predicted phosphatases | phosphoglycolate phosphatase |
| AE003853_263187 | AAF96154.1 | 24226 | COG0561 | Predicted hydrolases of the HAD superfamily | conserved hypothetical protein |
| AE003852_1453647 | AAF94522.1 | 24226 | COG0561 | Predicted hydrolases of the HAD superfamily | conserved hypothetical protein |
| AE003852_128715 | AAF93311.1 | 24226 | COG0561 | Predicted hydrolases of the HAD superfamily | conserved hypothetical protein |
| AE003852_556336 | AAF93690.1 | 34277 | COG0596 | Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) | beta-ketoadipate enol-lactone hydrolase, putative |
| AE003852_2893086 | AAF95858.1 | 34277 | COG0596 | Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) | bioH protein |
| AE003852_22028 | AAF93204.1 | 33297 | COG0604 | NADPH:quinone reductase and related Zn-dependent oxidoreductases | zinc-binding alcohol dehydrogenase |
| AE003852_585639 | AAF93720.1 | 33297 | COG0604 | NADPH:quinone reductase and related Zn-dependent oxidoreductases | quinone oxidoreductase |
| AE003853_739663 | AAF96696.1 | 8313 | COG0637 | Predicted phosphatase/phosphohexomutase | CbbY family protein |
| AE003853_597772 | AAF96563.1 | 8313 | COG0637 | Predicted phosphatase/phosphohexomutase | CbbY family protein |
| AE003853_110031 | AAF96016.1 | 8313 | COG0637 | Predicted phosphatase/phosphohexomutase | CbbY family protein |
| AE003853_808054 | AAF96757.1 | 33907 | COG0656 | Aldo/keto reductases, related to diketogulonate reductase | oxidoreductase, aldo/keto reductase 2 family |
| AE003852_2548395 | AAF95527.1 | 29985 | COG0730 | Predicted permeases | conserved hypothetical protein |
| AE003852_1996384 | AAF95004.1 | 29985 | COG0730 | Predicted permeases | conserved hypothetical protein |
| AE003852_2164851 | AAF95160.1 | 2118 | COG0733 | Na+-dependent transporters of the SNF family | sodium-dependent transporter |
| AE003852_2438223 | AAF95427.1 | 2118 | COG0733 | Na+-dependent transporters of the SNF family | sodium-dependent transporter |
| AE003852_1800425 | AAF94819.1 | 2118 | COG0733 | Na+-dependent transporters of the SNF family | sodium-dependent transporter, putative |
| AE003852_122943 | AAF93306.1 | 8313 | COG1011 | Predicted hydrolase (HAD superfamily) | conserved hypothetical protein |
| AE003853_545462 | AAF96509.1 | 8313 | COG1011 | Predicted hydrolase (HAD superfamily) | conserved hypothetical protein |
| AE003852_2174580 | AAF95169.1 | 32843 | COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | 3-oxoacyl-(acyl-carrier-protein) reductase |
| AE003852_1702684 | AAF94745.1 | 32843 | COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | oxidoreductase, short-chain dehydrogenase/reductase family |
| AE003852_830176 | AAF93939.1 | 32843 | COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | vibriobactin-specific 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
| AE003852_1043447 | AAF94141.1 | 32843 | COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | oxidoreductase, short-chain dehydrogenase/reductase family |
| AE003852_1126812 | AAF94218.1 | 32843 | COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | oxidoreductase, short-chain dehydrogenase/reductase family |
| AE003853_316096 | AAF96209.1 | 32843 | COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | oxidoreductase, short-chain dehydrogenase/reductase family |
| AE003852_1187655 | AAF94278.1 | 32843 | COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | oxidoreductase, short-chain dehydrogenase/reductase family |
| AE003852_1956171 | AAF94963.1 | 32843 | COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | C-factor, putative |
| AE003853_1008136 | AAF96951.1 | 32843 | COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | oxidoreductase, short-chain dehydrogenase/reductase family |
| AE003853_1062830 | AAF96999.1 | 32843 | COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | oxidoreductase, short-chain dehydrogenase/reductase family |
| AE003853_629322 | AAF96591.1 | 32843 | COG1028 | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | acetoacetyl-CoA reductase |
| AE003852_2691637 | AAF95646.1 | 21404 | COG1052 | Lactate dehydrogenase and related dehydrogenases | 2-hydroxyacid dehydrogenase family protein |
| AE003853_208570 | AAF96105.1 | 21404 | COG1052 | Lactate dehydrogenase and related dehydrogenases | D-lactate dehydrogenase |
| AE003853_837892 | AAF96783.1 | 33297 | COG1063 | Threonine dehydrogenase and related Zn-dependent dehydrogenases | threonine 3-dehydrogenase |
| AE003852_1172740 | AAF94262.1 | 35629 | COG1101 | ABC-type uncharacterized transport system, ATPase component | ABC transporter, ATP-binding protein |
| AE003852_168532 | AAF93346.1 | 35629 | COG1123 | ATPase components of various ABC-type transport systems, contain duplicated ATPase | peptide ABC transporter, ATP-binding protein |
| AE003853_524830 | AAF96490.1 | 35629 | COG1123 | ATPase components of various ABC-type transport systems, contain duplicated ATPase | peptide ABC transporter, ATP-binding protein, putative |
| AE003853_924885 | AAF96873.1 | 35629 | COG1123 | ATPase components of various ABC-type transport systems, contain duplicated ATPase | ABC transporter, ATP-binding protein |
| AE003853_1056588 | AAF96993.1 | 35629 | COG1123 | ATPase components of various ABC-type transport systems, contain duplicated ATPase | ABC transporter, ATP-binding protein |
| AE003852_2711129 | AAF95669.1 | 35629 | COG1137 | ABC-type (unclassified) transport system, ATPase component | ABC transporter, ATP-binding protein |
| AE003853_781822 | AAF96735.1 | 12775 | COG1253 | Hemolysins and related proteins containing CBS domains | hemolysin, putative |
| AE003852_592295 | AAF93726.1 | 12775 | COG1253 | Hemolysins and related proteins containing CBS domains | hemolysin, putative |
| AE003852_277002 | AAF93446.1 | 12775 | COG1253 | Hemolysins and related proteins containing CBS domains | conserved hypothetical protein |
| AE003852_1308759 | AAF94394.1 | 1645 | COG1823 | Predicted Na+/dicarboxylate symporter | sodium/dicarboxylate symporter |
| AE003852_213504 | AAF93382.1 | 528 | COG2103 | Predicted sugar phosphate isomerase | GckR family protein |
| AE003852_737715 | AAF93855.1 | 528 | COG2103 | Predicted sugar phosphate isomerase | glucokinase regulatory protein-related protein |
| AE003852_460153 | AAF93603.1 | 32181 | COG2358 | TRAP-type uncharacterized transport system, periplasmic component | immunogenic protein |
| AE003853_159145 | AAF96057.1 | 32181 | COG2358 | TRAP-type uncharacterized transport system, periplasmic component | immunogenic protein |
| AE003852_2866489 | AAF95840.1 | 1303 | COG2704 | Anaerobic C4-dicarboxylate transporter | C4-dicarboxylate transporter, anaerobic |
| AE003853_222312 | AAF96117.1 | 1303 | COG2704 | Anaerobic C4-dicarboxylate transporter | C4-dicarboxylate transporter, anaerobic |
| AE003852_2197377 | AAF95189.1 | 33536 | COG3083 | Predicted hydrolase of alkaline phosphatase superfamily | conserved hypothetical protein |
| AE003852_2768612 | AAF95741.1 | 33536 | COG3083 | Predicted hydrolase of alkaline phosphatase superfamily | conserved hypothetical protein |
| AE003853_580887 | AAF96547.1 | 25174 | COG3176 | Putative hemolysin | conserved hypothetical protein/hemolysin, putative |
| AE003852_520634 | AAF93662.1 | 25174 | COG3176 | Putative hemolysin | hemolysin, putative |
| AE003853_324013 | AAF96222.1 | 7984 | COG3313 | Predicted Fe-S protein | hypothetical protein |
| AE003853_389588 | AAF96332.1 | 7984 | COG3313 | Predicted Fe-S protein | conserved hypothetical protein |
| AE003853_337188 | AAF96246.1 | 12706 | COG3324 | Predicted enzyme related to lactoylglutathione lyase | conserved hypothetical protein |
| AE003853_382786 | AAF96321.1 | 12706 | COG3324 | Predicted enzyme related to lactoylglutathione lyase | conserved hypothetical protein |
