All COGs for salmonellatyphimuriumlt2_lt2sgsc1412atcc700720 : R
Genes (#)COGCOG description
3COG0375Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)
2COG0388Predicted amidohydrolase
5COG0454Histone acetyltransferase HPA2 and related acetyltransferases
40COG0477Permeases of the major facilitator superfamily
4COG0488ATPase components of ABC transporters with duplicated ATPase domains
3COG0493NADPH-dependent glutamate synthase beta chain and related oxidoreductases
7COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymes
3COG0517FOG: CBS domain
2COG0537Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
1COG0546Predicted phosphatases
8COG0561Predicted hydrolases of the HAD superfamily
2COG0596Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
2COG0604NADPH:quinone reductase and related Zn-dependent oxidoreductases
2COG0628Predicted permease
4COG0637Predicted phosphatase/phosphohexomutase
4COG0641Arylsulfatase regulator (Fe-S oxidoreductase)
4COG0656Aldo/keto reductases, related to diketogulonate reductase
2COG0663Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
2COG0670Integral membrane protein, interacts with FtsH
5COG0673Predicted dehydrogenases and related proteins
3COG0693Putative intracellular protease/amidase
2COG0790FOG: TPR repeat, SEL1 subfamily
2COG0824Predicted thioesterase
2COG1011Predicted hydrolase (HAD superfamily)
11COG1028Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
2COG1052Lactate dehydrogenase and related dehydrogenases
7COG1063Threonine dehydrogenase and related Zn-dependent dehydrogenases
2COG1064Zn-dependent alcohol dehydrogenases
2COG1123ATPase components of various ABC-type transport systems, contain duplicated ATPase
1COG1137ABC-type (unclassified) transport system, ATPase component
3COG1253Hemolysins and related proteins containing CBS domains
2COG1546Uncharacterized protein (competence- and mitomycin-induced)
2COG1741Pirin-related protein
2COG1823Predicted Na+/dicarboxylate symporter
2COG1881Phospholipid-binding protein
1COG2130Putative NADP-dependent oxidoreductases
2COG2166SufE protein probably involved in Fe-S center assembly
2COG2249Putative NADPH-quinone reductase (modulator of drug activity B)
2COG2252Permeases
3COG2704Anaerobic C4-dicarboxylate transporter
2COG2823Predicted periplasmic or secreted lipoprotein
2COG2916DNA-binding protein H-NS
2COG2962Predicted permeases
5COG3302DMSO reductase anchor subunit
2COG3381Uncharacterized component of anaerobic dehydrogenases
1COG3726Uncharacterized membrane protein affecting hemolysin expression
1COG3960Glyoxylate carboligase
2COG3964Predicted amidohydrolase
1COG4172ABC-type uncharacterized transport system, duplicated ATPase component
1COG4174ABC-type uncharacterized transport system, permease component
1COG4221Short-chain alcohol dehydrogenase of unknown specificity
1COG4239ABC-type uncharacterized transport system, permease component
3COG4533ABC-type uncharacterized transport system, periplasmic component
1COG4619ABC-type uncharacterized transport system, ATPase component
7COG4948L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
1COG4989Predicted oxidoreductase

Included Genes in salmonellatyphimuriumlt2_lt2sgsc1412atcc700720 : R
gene_idprotein_idgene_familycogcog_descriptionproduct
AE006468_2999798AAL21734.16166COG0375Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)guanine-nucleotide binding protein in formate-hydrogenlyase system
AE006468_3307478AAL22018.16166COG0375Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)putative hydrogenase expression/formation protein
AE006468_1607674AAL20450.16166COG0375Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)putative hydrogenase
AE006468_693656AAL19582.120238COG0388Predicted amidohydrolaseputative hydrolase
AE006468_351721AAL19265.120238COG0388Predicted amidohydrolaseputative amidohydrolase
AE006468_4400247AAL23005.113504COG0454Histone acetyltransferase HPA2 and related acetyltransferasesputative acetyltransferase
AE006468_3829911AAL22503.113504COG0454Histone acetyltransferase HPA2 and related acetyltransferasesputative acetyltransferase
AE006468_3047619AAL21785.18663COG0454Histone acetyltransferase HPA2 and related acetyltransferasesputative acetyltransferase
AE006468_3837736AAL22511.18663COG0454Histone acetyltransferase HPA2 and related acetyltransferasesputative acetyltransferase
AE006468_4562850AAL23142.18663COG0454Histone acetyltransferase HPA2 and related acetyltransferasesputative acetyltransferase
AE006468_3506513AAL22207.110586COG0477Permeases of the major facilitator superfamilyMFS family sialic acid transport protein
AE006468_1221641AAL20063.110586COG0477Permeases of the major facilitator superfamilyputative sugar transport protein
AE006468_4097508AAL22745.110756COG0477Permeases of the major facilitator superfamilyputative MFS family tranport protein
AE006468_2221725AAL21033.110756COG0477Permeases of the major facilitator superfamilyputative MFS family transport protein
AE006468_2236271AAL21045.112214COG0477Permeases of the major facilitator superfamilyputative MFS family transport protein
AE006468_2533547AAL21315.112214COG0477Permeases of the major facilitator superfamilyMFS superfamily xanthosine permease
AE006468_3271455AAL21988.112214COG0477Permeases of the major facilitator superfamilyMFS family nucleoside transport
AE006468_2794375AAL21548.112949COG0477Permeases of the major facilitator superfamilyMFS family alpha-ketoglutarate permease
AE006468_3783052AAL22469.112949COG0477Permeases of the major facilitator superfamilyputative MFS family transport protein
AE006468_751371AAL19633.112949COG0477Permeases of the major facilitator superfamilycitrate-proton symporter
AE006468_1584546AAL20426.112949COG0477Permeases of the major facilitator superfamilyputative transport protein
AE006468_247951AAL19176.112949COG0477Permeases of the major facilitator superfamilyputative inner membrane protein
AE006468_4530970AAL23114.112949COG0477Permeases of the major facilitator superfamilyMFS family low-affinity proline transporter
AE006468_1442952AAL20286.113026COG0477Permeases of the major facilitator superfamilyputative MFS family transport protein
AE006468_1441353AAL20285.113026COG0477Permeases of the major facilitator superfamilyputative MFS family transport protein
AE006468_2322483AAL21124.113376COG0477Permeases of the major facilitator superfamilybicyclomycin resistance protein
AE006468_1505673AAL20350.113376COG0477Permeases of the major facilitator superfamilyputative MFS family transport protein
AE006468_4054077AAL22705.113376COG0477Permeases of the major facilitator superfamilyputative MFS family tranport protein
AE006468_1241247AAL20084.11962COG0477Permeases of the major facilitator superfamilyputative MFS family transport protein
AE006468_435597AAL19336.11962COG0477Permeases of the major facilitator superfamilyputative permease
AE006468_2396869AAL21191.126047COG0477Permeases of the major facilitator superfamilyputative MFS family transport protein
AE006468_1194036AAL20039.126047COG0477Permeases of the major facilitator superfamily4-hydroxyphenylacetate catabolism protein
AE006468_2377974AAL21175.126047COG0477Permeases of the major facilitator superfamilyputative permease
AE006468_1618320AAL20462.131447COG0477Permeases of the major facilitator superfamilyputative transport protein
AE006468_3113237AAL21842.131447COG0477Permeases of the major facilitator superfamilyputative MFS superfamily D-glucarate permease
AE006468_3892725AAL22557.131447COG0477Permeases of the major facilitator superfamilyputative permease
AE006468_4029213AAL22686.131447COG0477Permeases of the major facilitator superfamilyMFS family D-galactonate transport protein
AE006468_1656810AAL20492.132899COG0477Permeases of the major facilitator superfamilymethyl viologen resistance protein
AE006468_1938638AAL20758.132899COG0477Permeases of the major facilitator superfamilyputative transport protein
AE006468_4661317AAL23239.132911COG0477Permeases of the major facilitator superfamilysugar (and other) transporter
AE006468_3175802AAL21892.132911COG0477Permeases of the major facilitator superfamilyL-arabinose: proton symport protein
AE006468_3253339AAL21966.132911COG0477Permeases of the major facilitator superfamilyMFS family galactose:proton symporter
AE006468_4659425AAL23238.132911COG0477Permeases of the major facilitator superfamilysugar (and other) transporter
AE006468_371403AAL19282.14680COG0477Permeases of the major facilitator superfamilyputative permease
AE006468_1562701AAL20405.14680COG0477Permeases of the major facilitator superfamilyputative MFS familty transport protein
AE006468_2484593AAL21273.16289COG0477Permeases of the major facilitator superfamilyputative transport protein
AE006468_3748223AAL22441.16289COG0477Permeases of the major facilitator superfamilyputative MFS family transport protein
AE006468_4671190AAL23248.16289COG0477Permeases of the major facilitator superfamilyputative permease
AE006468_4772042AAL23335.18403COG0477Permeases of the major facilitator superfamilyputative MFS family transport protein
AE006468_938495AAL19802.18403COG0477Permeases of the major facilitator superfamilymultidrug translocase
AE006468_4837159AAL23396.135629COG0488ATPase components of ABC transporters with duplicated ATPase domainsputative transport protein
AE006468_905036AAL19774.135629COG0488ATPase components of ABC transporters with duplicated ATPase domainsputative ATPase component of ABC transporter with duplicated ATPase domain
AE006468_1152005AAL19995.135629COG0488ATPase components of ABC transporters with duplicated ATPase domainsputative ATPase component of ABC transporter
AE006468_3609833AAL22322.135629COG0488ATPase components of ABC transporters with duplicated ATPase domainsputative ATPase component of ABC transporter
AE006468_2281393AAL21090.19311COG0493NADPH-dependent glutamate synthase beta chain and related oxidoreductasesputative NADPH-dependent glutamate synthase beta chain or related oxidoreductase
AE006468_2589615AAL21373.19311COG0493NADPH-dependent glutamate synthase beta chain and related oxidoreductasesputative oxidoreductase
AE006468_3498993AAL22200.19311COG0493NADPH-dependent glutamate synthase beta chain and related oxidoreductasesglutamate synthase, small subunit
AE006468_2402597AAL21196.112241COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesputative NTP pyrophosphohydrolases including oxidative damage repair enzymes
AE006468_3162168AAL21880.112241COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesputative invasion protein
AE006468_161546AAL19101.112241COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymes7,8-dihydro-8-oxoguanine-triphosphatase
AE006468_1380453AAL20226.112241COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesputative mutator MutT protein
AE006468_2587089AAL21371.132357COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesputative pyrophosphohydrolase
AE006468_3347734AAL22059.132357COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesputative resistance protein
AE006468_3649301AAL22356.132357COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesputative NTP pyrophosphohydrolase
AE006468_3480962AAL22184.118387COG0517FOG: CBS domainputative polysialic acid capsule expression protein
AE006468_2982442AAL21718.118387COG0517FOG: CBS domainputative polysialic acid capsule expression protein
AE006468_2624452AAL21405.13694COG0517FOG: CBS domainIMP dehydrogenase
AE006468_3327928AAL22041.134027COG0537Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolasesputative diadenosine tetraphosphate (Ap4A) hydrolase
AE006468_1290403AAL20134.134027COG0537Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolasesputative protein kinase C inhibitor
AE006468_3637244AAL22344.18313COG0546Predicted phosphatasesphosphoglycolate phosphatase
AE006468_4166892AAL22806.124226COG0561Predicted hydrolases of the HAD superfamilyputative hydrolase of the HAD superfamily
AE006468_4219262AAL22849.124226COG0561Predicted hydrolases of the HAD superfamilyputative hydrolase
AE006468_4034205AAL22690.124226COG0561Predicted hydrolases of the HAD superfamilyputative hydrolase of the HAD superfamily
AE006468_514231AAL19412.124226COG0561Predicted hydrolases of the HAD superfamilyputative hydrolase
AE006468_910460AAL19778.124226COG0561Predicted hydrolases of the HAD superfamilyputative hydrolase of the HAD superfamily
AE006468_908009AAL19776.124226COG0561Predicted hydrolases of the HAD superfamilyputative hydrolase of the HAD superfamily
AE006468_848199AAL19722.124226COG0561Predicted hydrolases of the HAD superfamilyputative hydrolase of the HAD superfamily
AE006468_939781AAL19803.124226COG0561Predicted hydrolases of the HAD superfamilyputative hydrolase
AE006468_3667888AAL22371.134277COG0596Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)putative hydrolase
AE006468_375715AAL19286.134277COG0596Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)putative hydrolase or acyltransferase
AE006468_4465543AAL23069.133297COG0604NADPH:quinone reductase and related Zn-dependent oxidoreductasesNADPH dependent quinone oxidoreductase
AE006468_3547011AAL22245.133297COG0604NADPH:quinone reductase and related Zn-dependent oxidoreductasesputative oxidoreductase
AE006468_1558798AAL20400.15410COG0628Predicted permeaseputative membrane transport protein
AE006468_3749572AAL22442.15410COG0628Predicted permeaseputative PerM family permease
AE006468_4059240AAL22710.18313COG0637Predicted phosphatase/phosphohexomutaseputative phosphatase/phosphohexomutase
AE006468_2968990AAL21705.18313COG0637Predicted phosphatase/phosphohexomutaseputative phosphoglucomutase
AE006468_1402340AAL20247.18313COG0637Predicted phosphatase/phosphohexomutaseputative enzyme
AE006468_2445897AAL21235.18313COG0637Predicted phosphatase/phosphohexomutaseputative phosphatase
AE006468_4172370AAL22810.14351COG0641Arylsulfatase regulator (Fe-S oxidoreductase)putative arylsulfatase regulator
AE006468_3282394AAL21997.14351COG0641Arylsulfatase regulator (Fe-S oxidoreductase)putative arylsulfatase regulator
AE006468_41723AAL19000.14351COG0641Arylsulfatase regulator (Fe-S oxidoreductase)putative arylsulfatase regulatory protein
AE006468_1365225AAL20212.14351COG0641Arylsulfatase regulator (Fe-S oxidoreductase)arylsulfatase regulator
AE006468_3325406AAL22039.133907COG0656Aldo/keto reductases, related to diketogulonate reductase2,5-diketo-D-gluconate reductase A
AE006468_295069AAL19212.133907COG0656Aldo/keto reductases, related to diketogulonate reductase2,5-diketo-D-gluconate reductase B
AE006468_1366518AAL20213.133907COG0656Aldo/keto reductases, related to diketogulonate reductaseputative aldehyde reductase
AE006468_1768804AAL20593.133907COG0656Aldo/keto reductases, related to diketogulonate reductaseputative aldo/keto reductase family
AE006468_81020AAL19033.124136COG0663Carbonic anhydrases/acetyltransferases, isoleucine patch superfamilystimulates carnitine racemase activity of CaiD and CaiB activity
AE006468_3572482AAL22262.124136COG0663Carbonic anhydrases/acetyltransferases, isoleucine patch superfamilyputative ferripyochelin binding protein
AE006468_873389AAL19744.17914COG0670Integral membrane protein, interacts with FtsHputative permease
AE006468_1174268AAL20018.17914COG0670Integral membrane protein, interacts with FtsHputative TEGT family carrier
AE006468_4667909AAL23245.121025COG0673Predicted dehydrogenases and related proteinsputative dehydrogenase
AE006468_3391006AAL22096.121025COG0673Predicted dehydrogenases and related proteinsputative dehydrogenase
AE006468_4676890AAL23253.121025COG0673Predicted dehydrogenases and related proteinsputative thiamine pyrophosphate-requiring enzyme
AE006468_1536306AAL20384.1368COG0673Predicted dehydrogenases and related proteinsputative oxidoreductase
AE006468_3714111AAL22405.1368COG0673Predicted dehydrogenases and related proteinsputative oxidoreductase
AE006468_2026132AAL20846.135433COG0693Putative intracellular protease/amidaseputative intracellular protease/amidase
AE006468_486227AAL19387.135433COG0693Putative intracellular protease/amidase4-methyl-5(beta-hydroxyethyl)-thiazole synthesis
AE006468_3437752AAL22141.135433COG0693Putative intracellular protease/amidaseputative intracellular proteinase
AE006468_490256AAL19392.121161COG0790FOG: TPR repeat, SEL1 subfamilyputative periplasmic protein
AE006468_491989AAL19393.121161COG0790FOG: TPR repeat, SEL1 subfamilyputative TPR repeat protein
AE006468_813027AAL19688.116432COG0824Predicted thioesteraseputative esterase
AE006468_511166AAL19409.116432COG0824Predicted thioesteraseputative esterase
AE006468_4813116AAL23374.18313COG1011Predicted hydrolase (HAD superfamily)putative haloacid dehalogenase-like hydrolase
AE006468_4154689AAL22794.18313COG1011Predicted hydrolase (HAD superfamily)putative hydrolase of the HAD superfamily
AE006468_1768000AAL20592.132843COG1028Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)putative short-chain alcohol dehydrogenase
AE006468_2268002AAL21075.132843COG1028Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)putative oxidoreductase
AE006468_2980225AAL21715.132843COG1028Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)glucitol (sorbitol)-6-phosphate dehydrogenase
AE006468_564929AAL19459.132843COG1028Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)putative oxidoreductase
AE006468_659921AAL19549.132843COG1028Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase
AE006468_1279223AAL20124.132843COG1028Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)3-oxoacyl-[acyl-carrier-protein] reductase
AE006468_1814369AAL20635.132843COG1028Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)putative oxoacyl-(acyl carrier protein) reductase
AE006468_2556599AAL21339.132843COG1028Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)putative oxidoreductase
AE006468_3177574AAL21893.132843COG1028Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)2-deoxy-D-gluconate 3-dehydrogenase
AE006468_3318580AAL22031.132843COG1028Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)putative oxidoreductase
AE006468_4727174AAL23302.132843COG1028Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)5-keto-D-gluconate-5-reductase
AE006468_3833687AAL22506.121404COG1052Lactate dehydrogenase and related dehydrogenases2-keto-D-gluconate reductase
AE006468_1740029AAL20565.121404COG1052Lactate dehydrogenase and related dehydrogenasesNAD-dependent fermentative D-lactate dehydrogenase
AE006468_1617320AAL20461.133297COG1063Threonine dehydrogenase and related Zn-dependent dehydrogenasesputative zinc-binding dehydrogenase
AE006468_678023AAL19566.133297COG1063Threonine dehydrogenase and related Zn-dependent dehydrogenasesputative dehydrogenase
AE006468_1583473AAL20425.133297COG1063Threonine dehydrogenase and related Zn-dependent dehydrogenasesputative dehydrogenase
AE006468_3243347AAL21957.133297COG1063Threonine dehydrogenase and related Zn-dependent dehydrogenasesputative zinc-binding dehydrogenase
AE006468_3430315AAL22133.133297COG1063Threonine dehydrogenase and related Zn-dependent dehydrogenasesgalactitol-1-phosphate dehydrogenase
AE006468_3902882AAL22567.133297COG1063Threonine dehydrogenase and related Zn-dependent dehydrogenasesthreonine 3-dehydrogenase
AE006468_4727963AAL23303.133297COG1063Threonine dehydrogenase and related Zn-dependent dehydrogenasesL-idonate 5-dehydrogenase
AE006468_1647794AAL20485.133297COG1064Zn-dependent alcohol dehydrogenasesalcohol dehydrogenase
AE006468_4729769AAL23305.133297COG1064Zn-dependent alcohol dehydrogenasesputative alcohol dehydrogenase
AE006468_918101AAL19784.135629COG1123ATPase components of various ABC-type transport systems, contain duplicated ATPaseputative ATPase components of ABC-type transport system, contain duplicated ATPase domain
AE006468_1342527AAL20184.135629COG1123ATPase components of various ABC-type transport systems, contain duplicated ATPaseputative ATPase component of ABC-type transport system
AE006468_3483637AAL22188.135629COG1137ABC-type (unclassified) transport system, ATPase componentputative ABC superfamily transport protein
AE006468_1926504AAL20743.110585COG1253Hemolysins and related proteins containing CBS domainsputative inner membrane protein
AE006468_2203325AAL21023.110585COG1253Hemolysins and related proteins containing CBS domainsputative inner membrane protein
AE006468_4643676AAL23227.112775COG1253Hemolysins and related proteins containing CBS domainsputative hemolysin-related protein
AE006468_1592376AAL20433.114663COG1546Uncharacterized protein (competence- and mitomycin-induced)putative competence-damaged protein
AE006468_2976000AAL21710.114663COG1546Uncharacterized protein (competence- and mitomycin-induced)putative cytoplasmic protein
AE006468_3401013AAL22109.12968COG1741Pirin-related proteinputative cytoplasmic protein
AE006468_3713292AAL22404.12968COG1741Pirin-related proteinputative cytoplasmic protein
AE006468_1450542AAL20292.11645COG1823Predicted Na+/dicarboxylate symporterputative Na+-dicarboxylate symporter
AE006468_1400075AAL20245.11645COG1823Predicted Na+/dicarboxylate symporterkinase-like protein
AE006468_858260AAL19729.115703COG1881Phospholipid-binding proteinputative phospholipid-binding protein
AE006468_1172172AAL20014.115703COG1881Phospholipid-binding proteinputative outer membrane protein
AE006468_1677096AAL20507.133297COG2130Putative NADP-dependent oxidoreductasesputative NADP-dependent oxidoreductase
AE006468_3137161AAL21863.131785COG2166SufE protein probably involved in Fe-S center assemblyputative SufE protein probably involved in Fe-S center assembly
AE006468_1457418AAL20298.131785COG2166SufE protein probably involved in Fe-S center assemblyputative SufE protein
AE006468_98255AAL19049.12290COG2249Putative NADPH-quinone reductase (modulator of drug activity B)putative NAD(P)H oxidoreductase
AE006468_3609016AAL22321.12290COG2249Putative NADPH-quinone reductase (modulator of drug activity B)putative NAD(P)H oxidoreductase
AE006468_4057734AAL22709.1311COG2252Permeasesputative xanthine/uracil permeases family
AE006468_4506146AAL23092.1311COG2252Permeasesputative xanthine/uracil permease family
AE006468_3771094AAL22459.11303COG2704Anaerobic C4-dicarboxylate transporterputative inner membrane protein
AE006468_4569529AAL23148.11303COG2704Anaerobic C4-dicarboxylate transporterDcu family anaerobic dicarboxylate transport protein
AE006468_4547107AAL23125.11303COG2704Anaerobic C4-dicarboxylate transporterDcu family anaerobic C4-dicarboxylate transporter
AE006468_3436344AAL22139.113486COG2823Predicted periplasmic or secreted lipoproteinputative periplasmic protein
AE006468_4815879AAL23376.113486COG2823Predicted periplasmic or secreted lipoproteinhyperosmotically inducible periplasmic protein
AE006468_1847283AAL20669.110042COG2916DNA-binding protein H-NSDNA-binding protein HLP-II
AE006468_2947225AAL21684.110042COG2916DNA-binding protein H-NSDNA-binding protein with chaperone activity
AE006468_3137904AAL21864.118307COG2962Predicted permeasesputative integral membrane protein
AE006468_4160063AAL22799.118307COG2962Predicted permeaseschloramphenicol resistance
AE006468_4554942AAL23131.121305COG3302DMSO reductase anchor subunitputative anaerobic dimethyl sulfoxide reductase, subunit C
AE006468_2661485AAL21422.121305COG3302DMSO reductase anchor subunitputative dimethylsulfoxide reductase
AE006468_676537AAL19564.121305COG3302DMSO reductase anchor subunitputative hydrogenase protein
AE006468_1572931AAL20415.121305COG3302DMSO reductase anchor subunitputative dimethylsulfoxide reductase
AE006468_1048395AAL19901.121305COG3302DMSO reductase anchor subunitanaerobic dimethyl sulfoxide reductase, subunit C
AE006468_4555731AAL23132.14880COG3381Uncharacterized component of anaerobic dehydrogenasesputative component of anaerobic dehydrogenases
AE006468_1572274AAL20414.14880COG3381Uncharacterized component of anaerobic dehydrogenasesputative component of anaerobic dehydrogenases
AE006468_4832463AAL23392.183COG3726Uncharacterized membrane protein affecting hemolysin expressionmembrane protein
AE006468_577467AAL19471.119738COG3960Glyoxylate carboligaseglyoxylate carboligase
AE006468_4653168AAL23233.11734COG3964Predicted amidohydrolaseputative imidazolonepropionase and related amidohydrolases
AE006468_4686469AAL23265.11734COG3964Predicted amidohydrolaseputative dihydroorotase
AE006468_2320155AAL21122.135629COG4172ABC-type uncharacterized transport system, duplicated ATPase componentputative ATPase component of ABC-type transport system
AE006468_2318034AAL21120.19810COG4174ABC-type uncharacterized transport system, permease componentputative ABC-type dipeptide/oligopeptide/nickel transport systems, permease component
AE006468_1588802AAL20430.132843COG4221Short-chain alcohol dehydrogenase of unknown specificityputative oxidoreductase
AE006468_2319128AAL21121.132450COG4239ABC-type uncharacterized transport system, permease componentputative ABC-type dipeptide/oligopeptide/nickel transport systems, permease component
AE006468_4067127AAL22718.18432COG4533ABC-type uncharacterized transport system, periplasmic componentputative dipeptide/oligopeptide/nickel ABC-type transport systems
AE006468_512430AAL19411.18432COG4533ABC-type uncharacterized transport system, periplasmic componentputative ABC transporter periplasmic binding protein
AE006468_126848AAL19073.18432COG4533ABC-type uncharacterized transport system, periplasmic componentputative periplasmic binding protein of transport system
AE006468_562486AAL19456.135629COG4619ABC-type uncharacterized transport system, ATPase componentputative ABC-type sugar/spermidine/putrescine transport system, ATPase component
AE006468_4036632AAL22692.128416COG4948L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamilyputative mandelate racemase
AE006468_2376757AAL21174.128416COG4948L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamilyputative dehydratase protein
AE006468_3110539AAL21840.128416COG4948L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamilyd-glucarate dehydratase
AE006468_3891455AAL22556.128416COG4948L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamilyputative mandelate racemase
AE006468_1582248AAL20424.128416COG4948L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamilyputative dehydratase
AE006468_3111900AAL21841.128416COG4948L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamilyputative d-glucarate dehydratase
AE006468_4030635AAL22687.128416COG4948L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamilygalactonate dehydratase
AE006468_1515074AAL20361.133907COG4989Predicted oxidoreductaseputative aldo/keto reductase

Excluded Genes in salmonellatyphimuriumlt2_lt2sgsc1412atcc700720 : R
gene_idprotein_idgene_familycogcog_descriptionproduct
AE006468_3715617AAL22406.134290COG0454Histone acetyltransferase HPA2 and related acetyltransferasesputative transferase
AE006468_4812651AAL23373.134290COG0456Acetyltransferasesmodification of 30S ribosomal subunit protein S18
AE006468_993599AAL19858.17506COG1310Predicted metal-dependent protease of the PAD1/JAB1 superfamilyFels-1 prophage; putative tail assembly protein
AE006468_1131381AAL19980.17506COG1310Predicted metal-dependent protease of the PAD1/JAB1 superfamilyGifsy-2 prophage; probable tail assembly protein
AE006468_2733905AAL21482.17461COG2110Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1Gifsy-1 prophage protein
AE006468_1963476AAL20782.17461COG2110Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1similar to phage-tail assembly protein
AE006468_4433964AAL23037.133503COG3497Phage tail sheath protein FIputative phage tail sheath protein
AE006468_2850109AAL21588.133503COG3497Phage tail sheath protein FIFels-2 prophage protein
AE006468_4423923AAL23027.120328COG3628Phage baseplate assembly protein Wputative phage baseplate protein
AE006468_2857059AAL21596.120328COG3628Phage baseplate assembly protein WFels-2 prophage protein
AE006468_1592074AAL20432.19371COG3729General stress proteinputative cytoplasmic protein
AE006468_1825558AAL20646.19371COG3729General stress proteinputative cytoplasmic protein
AE006468_1206204AAL20052.19371COG3729General stress proteinputative cytoplasmic protein
AE006468_2759427AAL21507.114010COG3772Phage-related lysozyme (muraminidase)Gifsy-1 prophage protein
AE006468_2859833AAL21602.114010COG3772Phage-related lysozyme (muraminidase)Fels-2 prophage protein
AE006468_1115210AAL19962.114010COG3772Phage-related lysozyme (muraminidase)Gifsy-2 prophage; lysozyme


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