All COGs for clostridiumacetobutylicum_atcc824 : R
Genes (#)COGCOG description
1COG0300Short-chain dehydrogenases of various substrate specificities
2COG0388Predicted amidohydrolase
5COG0446Uncharacterized NAD(FAD)-dependent dehydrogenases
6COG0454Histone acetyltransferase HPA2 and related acetyltransferases
8COG0457FOG: TPR repeat
6COG0477Permeases of the major facilitator superfamily
5COG0488ATPase components of ABC transporters with duplicated ATPase domains
2COG0493NADPH-dependent glutamate synthase beta chain and related oxidoreductases
2COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymes
2COG0517FOG: CBS domain
2COG0537Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
1COG0546Predicted phosphatases
7COG0561Predicted hydrolases of the HAD superfamily
2COG0579Predicted dehydrogenase
2COG0596Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
2COG0612Predicted Zn-dependent peptidases
2COG0622Predicted phosphoesterase
5COG0637Predicted phosphatase/phosphohexomutase
3COG0655Multimeric flavodoxin WrbA
1COG0656Aldo/keto reductases, related to diketogulonate reductase
3COG0673Predicted dehydrogenases and related proteins
2COG0679Predicted permeases
3COG0693Putative intracellular protease/amidase
2COG0697Permeases of the drug/metabolite transporter (DMT) superfamily
2COG1026Predicted Zn-dependent peptidases, insulinase-like
10COG1028Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
3COG1052Lactate dehydrogenase and related dehydrogenases
4COG1216Predicted glycosyltransferases
2COG1253Hemolysins and related proteins containing CBS domains
3COG1268Uncharacterized conserved protein
2COG1272Predicted membrane protein, hemolysin III homolog
5COG1277ABC-type transport system involved in multi-copper enzyme maturation, permease component
2COG1409Predicted phosphohydrolases
2COG1453Predicted oxidoreductases of the aldo/keto reductase family
2COG1473Metal-dependent amidase/aminoacylase/carboxypeptidase
2COG2070Dioxygenases related to 2-nitropropane dioxygenase
2COG2081Predicted flavoproteins
2COG2244Membrane protein involved in the export of O-antigen and teichoic acid
2COG2252Permeases
2COG2270Permeases of the major facilitator superfamily
2COG2333Predicted hydrolase (metallo-beta-lactamase superfamily)
1COG3845ABC-type uncharacterized transport systems, ATPase components
2COG3973Superfamily I DNA and RNA helicases
3COG3981Predicted acetyltransferase
2COG4908Uncharacterized protein containing a NRPS condensation (elongation) domain
1COG4989Predicted oxidoreductase

Included Genes in clostridiumacetobutylicum_atcc824 : R
gene_idprotein_idgene_familycogcog_descriptionproduct
AE001437_3129917AAK80933.132843COG0300Short-chain dehydrogenases of various substrate specificitiesPredicted short-chain dehydrogenase
AE001437_1929227AAK79747.114310COG0388Predicted amidohydrolaseNH(3)-dependent NAD(+) synthase (nadE) fused to amidohydrolase domain
AE001437_1204450AAK79026.114310COG0388Predicted amidohydrolaseNH(3)-dependent NAD(+) synthetase
AE001437_3548076AAK81302.111491COG0446Uncharacterized NAD(FAD)-dependent dehydrogenases2-enoate reductase (Two distinct NAD(FAD)-dependent dehydrogenase domains)
AE001437_3591546AAK81338.111491COG0446Uncharacterized NAD(FAD)-dependent dehydrogenasesNADH oxidase (two distinct flavin oxidoreductase domains)
AE001437_1195502AAK79020.111491COG0446Uncharacterized NAD(FAD)-dependent dehydrogenasesNADH:flavin oxidoreductase, possible NADH oxidase
AE001437_1464595AAK79292.112166COG0446Uncharacterized NAD(FAD)-dependent dehydrogenasesNAD(FAD)-dependent dehydrogenase
AE001437_1036900AAK78881.112166COG0446Uncharacterized NAD(FAD)-dependent dehydrogenasesUncharacterized NAD(FAD)-dependent dehydrogenase
AE001437_2598885AAK80445.114242COG0454Histone acetyltransferase HPA2 and related acetyltransferasesPredicted acetyltransferase
AE001437_182984AAK78144.114242COG0454Histone acetyltransferase HPA2 and related acetyltransferasesPredicted acetyltransferase
AE001437_2881274AAK80697.14594COG0454Histone acetyltransferase HPA2 and related acetyltransferasesPredicted acetyltransferase
AE001437_1154993AAK78983.14594COG0454Histone acetyltransferase HPA2 and related acetyltransferasesPredicted acetyltransferase
AE001437_2582421AAK80422.16784COG0454Histone acetyltransferase HPA2 and related acetyltransferasesPredicted acetyltransferase
AE001437_3407711AAK81190.16784COG0454Histone acetyltransferase HPA2 and related acetyltransferasesPredicted acetyltransferase
AE001437_2597236AAK80444.126377COG0457FOG: TPR repeatXre family DNA-binding domain and TPR repeats containing protein
AE001437_380405AAK78305.126377COG0457FOG: TPR repeatTPR repeats containing protein
AE001437_57977AAK78032.130543COG0457FOG: TPR repeatTPR-repeat-containing protein
AE001437_1068171AAK78901.130543COG0457FOG: TPR repeatTPR-repeat-containing protein
AE001437_1220811AAK79042.130988COG0457FOG: TPR repeatTPR-repeat containing protein
AE001437_1216910AAK79039.130988COG0457FOG: TPR repeatTPR-repeat-containing protein
AE001437_482450AAK78396.17112COG0457FOG: TPR repeatTPR-repeat-containing protein
AE001437_477956AAK78392.17112COG0457FOG: TPR repeatTPR-repeat-containing protein
AE001437_3681229AAK81408.11064COG0477Permeases of the major facilitator superfamilyPredicted permease
AE001437_647039AAK78539.11064COG0477Permeases of the major facilitator superfamilyIntegral membrane protein similar to antibiotic resistance protein B.subtilis
AE001437_3868764AAK81589.132899COG0477Permeases of the major facilitator superfamilyMDR-type permease
AE001437_1600181AAK79420.132899COG0477Permeases of the major facilitator superfamilyMDR-type permease
AE001437_1477067AAK79307.132911COG0477Permeases of the major facilitator superfamilyPossible sugar-proton symporter
AE001437_1487155AAK79313.132911COG0477Permeases of the major facilitator superfamilyD-xylose-proton symporter
AE001437_3081836AAK80890.135629COG0488ATPase components of ABC transporters with duplicated ATPase domainsATPase components of ABC transporter with duplicated ATPase domains (second domain is inactivated)
AE001437_3511501AAK81271.135629COG0488ATPase components of ABC transporters with duplicated ATPase domainsATPase component of ABC transporter (two ATPase domains)
AE001437_2837833AAK80660.135629COG0488ATPase components of ABC transporters with duplicated ATPase domainsABC-type transporter, duplicate ATPase component
AE001437_3151847AAK80953.135629COG0488ATPase components of ABC transporters with duplicated ATPase domainsATPase component of ABC transporter, with duplicated ATPase domains
AE001437_3146316AAK80948.135629COG0488ATPase components of ABC transporters with duplicated ATPase domainsATPase component of MDR-type ABC transporter, two ATPase domains
AE001437_1823115AAK79640.19311COG0493NADPH-dependent glutamate synthase beta chain and related oxidoreductasesSmall subunit of NADPH-dependent glutamate synthase
AE001437_886021AAK78740.19311COG0493NADPH-dependent glutamate synthase beta chain and related oxidoreductasesNADPH-dependent glutamate synthase beta chain
AE001437_2006251AAK79818.132357COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesNudix (MutT) family hydrolase
AE001437_3802864AAK81524.132357COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesNudix (MutT) family hydrolase
AE001437_3875445AAK81595.121915COG0517FOG: CBS domainTwo CBS domain containing protein
AE001437_3148345AAK80949.121915COG0517FOG: CBS domainCBS domain containing protein
AE001437_1431875AAK79258.134027COG0537Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolasesHIT family hydrolase
AE001437_1750532AAK79575.134027COG0537Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolasesHIT family hydrolase
AE001437_484196AAK78398.18313COG0546Predicted phosphatasesPredicted phosphatase, HAD family
AE001437_3178348AAK80975.124226COG0561Predicted hydrolases of the HAD superfamilyHAD superfamily hydrolase
AE001437_3072708AAK80883.124226COG0561Predicted hydrolases of the HAD superfamilyHAD superfamily hydrolase
AE001437_2339259AAK80201.124226COG0561Predicted hydrolases of the HAD superfamilyHAD superfamily hydrolases, YKRA B.subtilis ortholog
AE001437_2539788AAK80378.124226COG0561Predicted hydrolases of the HAD superfamilyHAD superfamily hydrolase
AE001437_601719AAK78501.124226COG0561Predicted hydrolases of the HAD superfamilyPredicted hydrolase of the HAD superfamily
AE001437_731464AAK78606.124226COG0561Predicted hydrolases of the HAD superfamilyPredicted hydrolase of the HAD family
AE001437_807382AAK78675.124226COG0561Predicted hydrolases of the HAD superfamilyPredicted hydrolase of the HAD superfamily
AE001437_19543AAK77999.111723COG0579Predicted dehydrogenasePredicted dehydrogenase with iron-sulfur domain
AE001437_1463151AAK79291.111723COG0579Predicted dehydrogenaseGlycerol-3-phosphate dehydrogenase, GLPA
AE001437_3620729AAK81362.123421COG0596Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)Alpha/beta superfamily hydrolase
AE001437_226827AAK78184.123421COG0596Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)Hydrolase of the alpha/beta superfamily
AE001437_2528273AAK80366.128051COG0612Predicted Zn-dependent peptidasesZn-dependent protease of MPP family
AE001437_1771616AAK79597.128051COG0612Predicted Zn-dependent peptidasesZn-dependent peptidase from MPP family
AE001437_2781106AAK80611.115899COG0622Predicted phosphoesterasePredicted phosphoesterase, YSNB B.subtilis ortholog
AE001437_2878798AAK80695.115899COG0622Predicted phosphoesterasePredicted phosphoesterase
AE001437_736549AAK78609.18313COG0637Predicted phosphatase/phosphohexomutasePredicted phosphatase
AE001437_2718462AAK80561.18313COG0637Predicted phosphatase/phosphohexomutaseBeta-phosphoglucomutase
AE001437_3380280AAK81166.18313COG0637Predicted phosphatase/phosphohexomutasePredicted phosphatase, HAD superfamily
AE001437_985095AAK78831.18313COG0637Predicted phosphatase/phosphohexomutasePredicted phosphatase
AE001437_173555AAK78137.18313COG0637Predicted phosphatase/phosphohexomutaseBeta-phosphoglucomutase, putative
AE001437_3685127AAK81412.121970COG0655Multimeric flavodoxin WrbAMultimeric flavodoxin WrbA family protein
AE001437_3514066AAK81273.121970COG0655Multimeric flavodoxin WrbAMultimeric flavodoxin WrbA family protein
AE001437_3700449AAK81431.121970COG0655Multimeric flavodoxin WrbAMultimeric flavodoxin WrbA family protein
AE001437_2074350AAK79919.133907COG0656Aldo/keto reductases, related to diketogulonate reductasePredicted aldo/keto reductase, YTBE/YVGN B.subtilis ortholog
AE001437_1372919AAK79203.121025COG0673Predicted dehydrogenases and related proteinsPredicted dehydrogenase, YULF B.subtilis ortholog
AE001437_3583781AAK81330.121025COG0673Predicted dehydrogenases and related proteinsPredicted dehydrogenase
AE001437_1627800AAK79448.121025COG0673Predicted dehydrogenases and related proteinsPredicted dehydrogenase
AE001437_3083542AAK80891.121283COG0679Predicted permeasesPredicted permease
AE001437_425216AAK78346.121283COG0679Predicted permeasesPredicted permease
AE001437_3523661AAK81282.135433COG0693Putative intracellular protease/amidasePutative intracellular protease/amidase (ThiJ family)
AE001437_1138921AAK78967.135433COG0693Putative intracellular protease/amidasePutative intracellular protease
AE001437_1770984AAK79596.135433COG0693Putative intracellular protease/amidasePutative intracellular protease/amidase, ThiJ family
AE001437_1225552AAK79048.111230COG0697Permeases of the drug/metabolite transporter (DMT) superfamilyPredicted permease
AE001437_84877AAK78061.111230COG0697Permeases of the drug/metabolite transporter (DMT) superfamilyPredicted permease
AE001437_3143268AAK80947.16117COG1026Predicted Zn-dependent peptidases, insulinase-likeZn-dependent peptidase, insulinase family
AE001437_1794345AAK79620.16117COG1026Predicted Zn-dependent peptidases, insulinase-likeZn-dependent metalloprotease, insulinase family
AE001437_1720589AAK79543.132843COG1028Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)Predicted oxidoreductase, ortholog of GSP39 B.subtilis
AE001437_1567958AAK79391.132843COG1028Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)Predicted dehydrogenase of short-chain alcohol dehydrogenase family, ortholog of YHDF B.subtilis
AE001437_2710314AAK80554.132843COG1028Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)Short-chain alcohol dehydrogenase family protein
AE001437_3661697AAK81391.132843COG1028Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)3-oxoacyl-acyl carrier protein reductase
AE001437_3683454AAK81410.132843COG1028Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)Short-chain alcohol dehydrogenase family protein
AE001437_3774453AAK81497.132843COG1028Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)3-ketoacyl-acyl carrier protein reductase
AE001437_3508628AAK81267.132843COG1028Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)Short-chain alcohol dehydrogenase family enzyme
AE001437_2735483AAK80573.132843COG1028Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)Possible 3-ketoacyl-acyl carrier protein reductase
AE001437_421026AAK78341.132843COG1028Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)2 deoxy-D-gluconate 3-dehydrogenase
AE001437_1470676AAK79299.132843COG1028Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)Short-chain alcohol dehydrogenase
AE001437_3077796AAK80887.121404COG1052Lactate dehydrogenase and related dehydrogenasesPossible phosphoglycerate dehydrogenase
AE001437_2813991AAK80638.121404COG1052Lactate dehydrogenase and related dehydrogenasesD-lactate dehydrogenase
AE001437_1687664AAK79510.121404COG1052Lactate dehydrogenase and related dehydrogenasesLactate dehydrogenase
AE001437_2423173AAK80277.120622COG1216Predicted glycosyltransferasesPredicted glycosyltransferase
AE001437_2422403AAK80276.120622COG1216Predicted glycosyltransferasesPredicted glycosyltransferase
AE001437_3219251AAK81009.18225COG1216Predicted glycosyltransferasesPredicted glycosyltransferase
AE001437_2414760AAK80268.18225COG1216Predicted glycosyltransferasesRhamnosyl transferase, rfbQ
AE001437_531742AAK78440.112775COG1253Hemolysins and related proteins containing CBS domainsCBS-domain containing protein, YHDP B.subtilis ortholog
AE001437_1566594AAK79390.112775COG1253Hemolysins and related proteins containing CBS domainsUncharacterized CBS domain-containing protein, YUGS B.subtilis ortholog
AE001437_1505779AAK79328.135466COG1268Uncharacterized conserved proteinUncharacterized protein of BioY family
AE001437_236407AAK78193.135466COG1268Uncharacterized conserved proteinBioY protein precursor
AE001437_3652787AAK81385.135466COG1268Uncharacterized conserved proteinUncharacterized conserved protein, bioY family
AE001437_1011286AAK78858.135406COG1272Predicted membrane protein, hemolysin III homologPredicted membrane protein, hemolysin III homolog
AE001437_1086813AAK78923.135406COG1272Predicted membrane protein, hemolysin III homologPredicted membrane protein, hemolysin III homolog
AE001437_2148552AAK80001.123915COG1277ABC-type transport system involved in multi-copper enzyme maturation, permease componentABC transported MDR-type, permease component
AE001437_2147700AAK80000.123915COG1277ABC-type transport system involved in multi-copper enzyme maturation, permease componentABC transported MDR-type, permease component
AE001437_150796AAK78130.19905COG1277ABC-type transport system involved in multi-copper enzyme maturation, permease componentRelated to ABC transporter permease component
AE001437_145505AAK78123.19905COG1277ABC-type transport system involved in multi-copper enzyme maturation, permease componentPredicted permease
AE001437_146743AAK78124.19905COG1277ABC-type transport system involved in multi-copper enzyme maturation, permease componentPredicted permease
AE001437_2935499AAK80750.122103COG1409Predicted phosphohydrolasesPredicted phosphohydrolase, Icc family
AE001437_2076562AAK79922.122103COG1409Predicted phosphohydrolasesPredicted phosphohydrolases, Icc family
AE001437_887475AAK78741.123134COG1453Predicted oxidoreductases of the aldo/keto reductase familyFe-S oxidoreductase
AE001437_889162AAK78743.123134COG1453Predicted oxidoreductases of the aldo/keto reductase familyFe-S oxidoreductase
AE001437_1064272AAK78897.14192COG1473Metal-dependent amidase/aminoacylase/carboxypeptidaseMetal-dependent amidohydrolase
AE001437_1162089AAK78990.14192COG1473Metal-dependent amidase/aminoacylase/carboxypeptidaseIAA-like amino acid hydrolase
AE001437_3778901AAK81503.123306COG2070Dioxygenases related to 2-nitropropane dioxygenaseDioxygenase related to 2-nitropropane dioxygenase
AE001437_3776151AAK81499.123306COG2070Dioxygenases related to 2-nitropropane dioxygenaseDioxygenase related to 2-nitropropane dioxygenase
AE001437_3792850AAK81513.13763COG2081Predicted flavoproteinsPredicted flavoprotein, YhiN family
AE001437_2001456AAK79813.13763COG2081Predicted flavoproteinsPredicted flavoprotein, YhiN family
AE001437_1164268AAK78992.118343COG2244Membrane protein involved in the export of O-antigen and teichoic acidSpoVB related membrane protein
AE001437_3358628AAK81149.118343COG2244Membrane protein involved in the export of O-antigen and teichoic acidPossible stage V sporulation protein B, predicted transporter
AE001437_2903344AAK80716.1311COG2252PermeasesPermease
AE001437_2949441AAK80764.1311COG2252PermeasesPredicted permease
AE001437_2870417AAK80689.11350COG2270Permeases of the major facilitator superfamilyPredicted permease, YXIO B.subtilis ortholog
AE001437_1728859AAK79552.11350COG2270Permeases of the major facilitator superfamilyMDR-type permease
AE001437_2726730AAK80569.11719COG2333Predicted hydrolase (metallo-beta-lactamase superfamily)ComE-like protein, Metallo beta-lactamase superfamily hydrolase
AE001437_1085697AAK78922.11719COG2333Predicted hydrolase (metallo-beta-lactamase superfamily)ComE-like protein, Metallo beta-lactamase superfamily hydrolase, secreted
AE001437_812161AAK78680.135629COG3845ABC-type uncharacterized transport systems, ATPase componentsSugar ABC-transporter, ATP-ase component
AE001437_1176126AAK79002.13703COG3973Superfamily I DNA and RNA helicasesSuperfamily I DNA helicase
AE001437_697543AAK78581.13703COG3973Superfamily I DNA and RNA helicasesSuperfamily I DNA and RNA helicase
AE001437_2867067AAK80685.11681COG3981Predicted acetyltransferasePredicted acetyltransferase
AE001437_2595805AAK80441.11681COG3981Predicted acetyltransferasePredicted acetyltransferase
AE001437_368996AAK78296.11681COG3981Predicted acetyltransferasePredicted acetyltransferase
AE001437_2117065AAK79964.118391COG4908Uncharacterized protein containing a NRPS condensation (elongation) domainSiderophore/Surfactin synthetase related protein
AE001437_2115687AAK79963.118391COG4908Uncharacterized protein containing a NRPS condensation (elongation) domainSiderophore/Surfactin synthetase related protein
AE001437_3555111AAK81309.133907COG4989Predicted oxidoreductaseAldo/keto reductase family enzyme

Excluded Genes in clostridiumacetobutylicum_atcc824 : R
gene_idprotein_idgene_familycogcog_descriptionproduct
AE001437_2673404AAK80520.134290COG0454Histone acetyltransferase HPA2 and related acetyltransferasesPredicted acetyltransferase
AE001437_1561646AAK79384.134290COG0454Histone acetyltransferase HPA2 and related acetyltransferasesPredicted acetyltransferase
AE001437_2617354AAK80463.134290COG0454Histone acetyltransferase HPA2 and related acetyltransferasesPredicted acetyltransferase
AE001437_2970636AAK80784.134290COG0456AcetyltransferasesPredicted acetyltransferase


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