All COGs for vibriocholerae_n16961_o1 : P
Genes (#)COGCOG description
2COG0226ABC-type phosphate transport system, periplasmic component
2COG0248Exopolyphosphatase
3COG0444ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
3COG0471Di- and tricarboxylate transporters
5COG0477Permeases of the major facilitator superfamily
1COG0573ABC-type phosphate transport system, permease component
1COG0581ABC-type phosphate transport system, permease component
6COG0601ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
2COG0605Superoxide dismutase
2COG0607Rhodanese-related sulfurtransferase
6COG0609ABC-type Fe3+-siderophore transport system, permease component
3COG0659Sulfate permease and related transporters (MFS superfamily)
2COG0735Fe2+/Zn2+ uptake regulation proteins
2COG1117ABC-type phosphate transport system, ATPase component
2COG1118ABC-type sulfate/molybdate transport systems, ATPase component
5COG1120ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components
1COG1121ABC-type Mn/Zn transport systems, ATPase component
1COG1122ABC-type cobalt transport system, ATPase component
3COG1124ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
1COG1135ABC-type metal ion transport system, ATPase component
5COG1173ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
1COG12183'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
2COG1275Tellurite resistance protein and related permeases
2COG1840ABC-type Fe3+ transport system, periplasmic component
1COG2116Formate/nitrite family of transporters
3COG2217Cation transport ATPase
3COG2239Mg/Co/Ni transporter MgtE (contains CBS domain)
1COG2897Rhodanese-related sulfurtransferase

Included Genes in vibriocholerae_n16961_o1 : P
gene_idprotein_idgene_familycogcog_descriptionproduct
AE003853_79395AAF95984.18448COG0226ABC-type phosphate transport system, periplasmic componentphosphate ABC transporter, periplasmic phosphate-binding protein
AE003853_751488AAF96705.18448COG0226ABC-type phosphate transport system, periplasmic componentABC transporter, periplasmic substrate-binding protein
AE003852_775321AAF93887.13939COG0248Exopolyphosphataseexopolyphosphatase
AE003852_314843AAF93478.13939COG0248Exopolyphosphataseguanosine-5'-triphosphate,3'-diphosphatepyrophosphatase
AE003852_1817277AAF94833.135629COG0444ABC-type dipeptide/oligopeptide/nickel transport system, ATPase componentpeptide ABC transporter, ATP-binding protein
AE003852_652483AAF93783.135629COG0444ABC-type dipeptide/oligopeptide/nickel transport system, ATPase componentpeptide ABC transporter, ATP-binding protein
AE003852_1162309AAF94253.135629COG0444ABC-type dipeptide/oligopeptide/nickel transport system, ATPase componentoligopeptide ABC transporter, ATP-binding protein
AE003852_1397026AAF94472.112702COG0471Di- and tricarboxylate transporterstransporter, putative
AE003852_357398AAF93511.112702COG0471Di- and tricarboxylate transporterstransporter, putative
AE003853_30484AAF95939.112702COG0471Di- and tricarboxylate transporterstransporter, NadC family
AE003852_1759459AAF94785.113376COG0477Permeases of the major facilitator superfamilymultidrug resistance protein
AE003852_2946786AAF95900.113376COG0477Permeases of the major facilitator superfamilymultidrug resistance protein
AE003852_69296AAF93247.113376COG0477Permeases of the major facilitator superfamilymultidrug resistance protein, putative
AE003852_1709719AAF94751.132899COG0477Permeases of the major facilitator superfamilymultidrug transporter, putative
AE003852_1481602AAF94549.132899COG0477Permeases of the major facilitator superfamilymultidrug transporter, putative
AE003853_80309AAF95985.132079COG0573ABC-type phosphate transport system, permease componentphosphate ABC transporter, permease protein
AE003853_81292AAF95986.132079COG0581ABC-type phosphate transport system, permease componentphosphate ABC transporter, permease protein
AE003852_654497AAF93785.19810COG0601ABC-type dipeptide/oligopeptide/nickel transport systems, permease componentspeptide ABC transporter, permease protein
AE003852_171999AAF93348.19810COG0601ABC-type dipeptide/oligopeptide/nickel transport systems, permease componentspeptide ABC transporter, permease protein
AE003852_1160448AAF94251.19810COG0601ABC-type dipeptide/oligopeptide/nickel transport systems, permease componentsoligopeptide ABC transporter, permease protein
AE003852_1815441AAF94831.19810COG0601ABC-type dipeptide/oligopeptide/nickel transport systems, permease componentspeptide ABC transporter, permease protein
AE003853_527474AAF96492.19810COG0601ABC-type dipeptide/oligopeptide/nickel transport systems, permease componentspeptide ABC transporter, permease protein, putative
AE003853_1054920AAF96991.19810COG0601ABC-type dipeptide/oligopeptide/nickel transport systems, permease componentsABC transporter, permease protein
AE003852_2203190AAF95193.122155COG0605Superoxide dismutasesuperoxide dismutase, Fe
AE003852_2861967AAF95835.122155COG0605Superoxide dismutasesuperoxide dismutase, Mn
AE003852_2824905AAF95795.115271COG0607Rhodanese-related sulfurtransferaseconserved hypothetical protein
AE003852_98786AAF93278.115271COG0607Rhodanese-related sulfurtransferaseglpE protein
AE003852_1315915AAF94403.110083COG0609ABC-type Fe3+-siderophore transport system, permease componentvitamin B12 ABC transporter, permease protein BtuC, putative
AE003852_833444AAF93942.110083COG0609ABC-type Fe3+-siderophore transport system, permease componentferric vibriobactin ABC transporter, permease protein
AE003853_250748AAF96141.110083COG0609ABC-type Fe3+-siderophore transport system, permease componentiron(III) ABC transporter, permease protein
AE003853_868395AAF96811.110083COG0609ABC-type Fe3+-siderophore transport system, permease componenthemin ABC transporter, permease protein, putative
AE003852_834475AAF93943.110083COG0609ABC-type Fe3+-siderophore transport system, permease componentferric vibriobactin ABC transporter, permease protein
AE003853_249820AAF96140.110083COG0609ABC-type Fe3+-siderophore transport system, permease componentiron(III) ABC transporter, permease protein
AE003852_614896AAF93754.12353COG0659Sulfate permease and related transporters (MFS superfamily)sulfate permease family protein
AE003852_2184950AAF95179.12353COG0659Sulfate permease and related transporters (MFS superfamily)sulfate permease family protein
AE003853_86658AAF95991.12353COG0659Sulfate permease and related transporters (MFS superfamily)sulfate permease family protein
AE003852_2263275AAF95252.17071COG0735Fe2+/Zn2+ uptake regulation proteinsferric uptake regulation protein
AE003852_393507AAF93551.17071COG0735Fe2+/Zn2+ uptake regulation proteinszinc uptake regulation protein, putative
AE003852_782962AAF93891.135629COG1117ABC-type phosphate transport system, ATPase componentphosphate ABC transporter, ATP-binding protein
AE003853_82190AAF95987.135629COG1117ABC-type phosphate transport system, ATPase componentphosphate ABC transporter, ATP-binding protein
AE003852_572759AAF93709.135629COG1118ABC-type sulfate/molybdate transport systems, ATPase componentsulfate ABC transporter, ATP-binding protein
AE003853_667937AAF96623.135629COG1118ABC-type sulfate/molybdate transport systems, ATPase componentmolybdenum ABC transporter, ATP-binding protein
AE003852_835668AAF93944.135629COG1120ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase componentsferric vibriobactin ABC transporter, ATP-binding protein
AE003853_869494AAF96812.135629COG1120ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase componentshemin ABC transporter, ATP-binding protein HutD
AE003852_208648AAF93377.135629COG1120ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase componentsiron(III) ABC transporter, ATP-binding protein
AE003852_1316909AAF94404.135629COG1120ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase componentsvitamin B12 ABC transporter, ATP-binding protein BtuD, putative
AE003853_251701AAF96142.135629COG1120ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase componentsiron(III) ABC transporter, ATP-binding protein
AE003852_2241531AAF95228.135629COG1121ABC-type Mn/Zn transport systems, ATPase componentzinc ABC transporter, ATP-binding protein
AE003852_1640002AAF94679.135629COG1122ABC-type cobalt transport system, ATPase componentABC transporter, ATP-binding protein
AE003852_1163262AAF94254.135629COG1124ABC-type dipeptide/oligopeptide/nickel transport system, ATPase componentoligopeptide ABC transporter, ATP-binding protein
AE003852_651445AAF93782.135629COG1124ABC-type dipeptide/oligopeptide/nickel transport system, ATPase componentpeptide ABC transporter, ATP-binding protein
AE003852_1818269AAF94834.135629COG1124ABC-type dipeptide/oligopeptide/nickel transport system, ATPase componentpeptide ABC transporter, ATP-binding protein
AE003852_966706AAF94069.135629COG1135ABC-type metal ion transport system, ATPase componentABC transporter, ATP-binding protein
AE003852_653469AAF93784.132450COG1173ABC-type dipeptide/oligopeptide/nickel transport systems, permease componentspeptide ABC transporter, permease protein
AE003852_1161382AAF94252.132450COG1173ABC-type dipeptide/oligopeptide/nickel transport systems, permease componentsoligopeptide ABC transporter, permease protein
AE003853_526419AAF96491.132450COG1173ABC-type dipeptide/oligopeptide/nickel transport systems, permease componentspeptide ABC transporter, permease protein, putative
AE003852_1816390AAF94832.132450COG1173ABC-type dipeptide/oligopeptide/nickel transport systems, permease componentspeptide ABC transporter, permease protein
AE003852_173030AAF93349.132450COG1173ABC-type dipeptide/oligopeptide/nickel transport systems, permease componentspeptide ABC transporter, permease protein
AE003852_2895950AAF95862.126365COG12183'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatasecysQ protein
AE003852_2476209AAF95467.111918COG1275Tellurite resistance protein and related permeasesconserved hypothetical protein
AE003853_458389AAF96427.111918COG1275Tellurite resistance protein and related permeasesconserved hypothetical protein
AE003853_540239AAF96504.12176COG1840ABC-type Fe3+ transport system, periplasmic componentABC transporter, periplasmic substrate-binding protein
AE003853_621501AAF96585.12176COG1840ABC-type Fe3+ transport system, periplasmic componentiron(III) ABC transporter, periplasmic iron-compound-binding protein
AE003852_1829274AAF94845.117368COG2116Formate/nitrite family of transportersformate transporter 1, putative
AE003852_2368152AAF95359.131542COG2217Cation transport ATPasecation transport ATPase, E1-E2 family
AE003852_1533397AAF94594.131542COG2217Cation transport ATPasecation transport ATPase, E1-E2 family
AE003852_1097641AAF94192.131542COG2217Cation transport ATPasecation transport ATPase, E1-E2 family
AE003853_764273AAF96716.127086COG2239Mg/Co/Ni transporter MgtE (contains CBS domain)magnesium transporter MgtE, putative
AE003852_1786971AAF94806.127086COG2239Mg/Co/Ni transporter MgtE (contains CBS domain)magnesium transporter
AE003852_2715455AAF95675.127086COG2239Mg/Co/Ni transporter MgtE (contains CBS domain)magnesium transporter
AE003853_554614AAF96521.111875COG2897Rhodanese-related sulfurtransferasethiosulfate sulfurtransferase SseA, putative

Excluded Genes in vibriocholerae_n16961_o1 : P
gene_idprotein_idgene_familycogcog_descriptionproduct
AE003852_39103AAF93220.14300COG0168Trk-type K+ transport systems, membrane componentspotassium uptake protein TrkH
AE003852_2940002AAF95895.14300COG0168Trk-type K+ transport systems, membrane componentspotassium uptake protein TrkH
AE003852_504802AAF93648.110376COG1629Outer membrane receptor proteins, mostly Fe transportiron-regulated outer membrane virulence protein, TonB receptor family
AE003852_145370AAF93332.110376COG1629Outer membrane receptor proteins, mostly Fe transportvitamin B12 receptor


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