| All COGs for pseudomonasaeruginosapao1 : O |
| Genes (#) | COG | COG description |
| 2 | COG0109 | Polyprenyltransferase (cytochrome oxidase assembly factor) |
| 1 | COG0225 | Peptide methionine sulfoxide reductase |
| 1 | COG0229 | Conserved domain frequently associated with peptide methionine sulfoxide reductase |
| 2 | COG0265 | Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
| 3 | COG0386 | Glutathione peroxidase |
| 2 | COG0425 | Predicted redox protein, regulator of disulfide bond formation |
| 2 | COG0443 | Molecular chaperone |
| 4 | COG0450 | Peroxiredoxin |
| 2 | COG0466 | ATP-dependent Lon protease, bacterial type |
| 2 | COG0492 | Thioredoxin reductase |
| 3 | COG0526 | Thiol-disulfide isomerase and thioredoxins |
| 6 | COG0542 | ATPases with chaperone activity, ATP-binding subunit |
| 3 | COG0555 | ABC-type sulfate transport system, permease component |
| 15 | COG0625 | Glutathione S-transferase |
| 2 | COG0652 | Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
| 2 | COG0740 | Protease subunit of ATP-dependent Clp proteases |
| 2 | COG0760 | Parvulin-like peptidyl-prolyl isomerase |
| 2 | COG1047 | FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
| 1 | COG1219 | ATP-dependent protease Clp, ATPase subunit |
| 1 | COG1220 | ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
| 1 | COG1225 | Peroxiredoxin |
| 2 | COG1764 | Predicted redox protein, regulator of disulfide bond formation |
| 1 | COG2077 | Peroxiredoxin |
| 2 | COG2192 | Predicted carbamoyl transferase, NodU family |
| 1 | COG2360 | Leu/Phe-tRNA-protein transferase |
| 1 | COG2935 | Putative arginyl-tRNA:protein arginylyltransferase |
| 4 | COG3278 | Cbb3-type cytochrome oxidase, subunit 1 |
| 2 | COG3531 | Predicted protein-disulfide isomerase |
| 2 | COG3555 | Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases |
| Included Genes in pseudomonasaeruginosapao1 : O |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| AE004091_1432037 | AAG04710.1 | 31558 | COG0109 | Polyprenyltransferase (cytochrome oxidase assembly factor) | cytochrome o ubiquinol oxidase protein CyoE |
| AE004091_134319 | AAG03503.1 | 31558 | COG0109 | Polyprenyltransferase (cytochrome oxidase assembly factor) | probable cytochrome c oxidase assembly factor |
| AE004091_5643802 | AAG08403.1 | 20134 | COG0225 | Peptide methionine sulfoxide reductase | peptide methionine sulfoxide reductase |
| AE004091_3180553 | AAG06215.1 | 20134 | COG0229 | Conserved domain frequently associated with peptide methionine sulfoxide reductase | conserved hypothetical protein |
| AE004091_4979833 | AAG07834.1 | 10272 | COG0265 | Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain | AlgW protein |
| AE004091_833949 | AAG04155.1 | 10272 | COG0265 | Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain | serine protease MucD precursor |
| AE004091_3179956 | AAG06214.1 | 68 | COG0386 | Glutathione peroxidase | probable glutathione peroxidase |
| AE004091_1398618 | AAG04676.1 | 68 | COG0386 | Glutathione peroxidase | probable glutathione peroxidase |
| AE004091_913777 | AAG04227.1 | 68 | COG0386 | Glutathione peroxidase | probable glutathione peroxidase |
| AE004091_1090606 | AAG04395.1 | 11488 | COG0425 | Predicted redox protein, regulator of disulfide bond formation | conserved hypothetical protein |
| AE004091_1704522 | AAG04953.1 | 11488 | COG0425 | Predicted redox protein, regulator of disulfide bond formation | conserved hypothetical protein |
| AE004091_4267716 | AAG07197.1 | 2696 | COG0443 | Molecular chaperone | heat shock protein HscA |
| AE004091_5347197 | AAG08147.1 | 2696 | COG0443 | Molecular chaperone | DnaK protein |
| AE004091_3948990 | AAG06917.1 | 32187 | COG0450 | Peroxiredoxin | probable peroxidase |
| AE004091_3855492 | AAG06838.1 | 32187 | COG0450 | Peroxiredoxin | probable antioxidant protein |
| AE004091_927147 | AAG04237.1 | 32187 | COG0450 | Peroxiredoxin | probable alkyl hydroperoxide reductase |
| AE004091_158199 | AAG03529.1 | 32187 | COG0450 | Peroxiredoxin | alkyl hydroperoxide reductase subunit C |
| AE004091_845793 | AAG04168.1 | 2683 | COG0466 | ATP-dependent Lon protease, bacterial type | probable ATP-dependent protease |
| AE004091_1956227 | AAG05192.1 | 2683 | COG0466 | ATP-dependent Lon protease, bacterial type | Lon protease |
| AE004091_2959467 | AAG06004.1 | 3647 | COG0492 | Thioredoxin reductase | thioredoxin reductase 1 |
| AE004091_927880 | AAG04238.1 | 3647 | COG0492 | Thioredoxin reductase | thioredoxin reductase 2 |
| AE004091_1607065 | AAG04870.1 | 32187 | COG0526 | Thiol-disulfide isomerase and thioredoxins | cytochrome C biogenesis protein CcmG |
| AE004091_5439917 | AAG08230.1 | 6411 | COG0526 | Thiol-disulfide isomerase and thioredoxins | thiol:disulfide interchange protein DipZ |
| AE004091_2795808 | AAG05866.1 | 6411 | COG0526 | Thiol-disulfide isomerase and thioredoxins | probable thiol:disulfide interchange protein |
| AE004091_5087407 | AAG07930.1 | 4410 | COG0542 | ATPases with chaperone activity, ATP-binding subunit | ClpB protein |
| AE004091_2962302 | AAG06008.1 | 4410 | COG0542 | ATPases with chaperone activity, ATP-binding subunit | ATP-binding protease component ClpA |
| AE004091_108221 | AAG03480.1 | 4410 | COG0542 | ATPases with chaperone activity, ATP-binding subunit | probable ClpA/B-type chaperone |
| AE004091_1810751 | AAG05051.1 | 4410 | COG0542 | ATPases with chaperone activity, ATP-binding subunit | probable ClpA/B-type protease |
| AE004091_2620713 | AAG05759.1 | 4410 | COG0542 | ATPases with chaperone activity, ATP-binding subunit | probable ClpA/B-type protease |
| AE004091_518083 | AAG03848.1 | 4410 | COG0542 | ATPases with chaperone activity, ATP-binding subunit | probable ClpA/B protease ATP binding subunit |
| AE004091_315811 | AAG03671.1 | 18314 | COG0555 | ABC-type sulfate transport system, permease component | sulfate transport protein CysT |
| AE004091_2021712 | AAG05251.1 | 18314 | COG0555 | ABC-type sulfate transport system, permease component | molybdenum transport protein ModB |
| AE004091_314931 | AAG03670.1 | 18314 | COG0555 | ABC-type sulfate transport system, permease component | sulfate transport protein CysW |
| AE004091_4931745 | AAG07789.1 | 26410 | COG0625 | Glutathione S-transferase | probable glutathione S-transferase |
| AE004091_4305644 | AAG07231.1 | 26410 | COG0625 | Glutathione S-transferase | hypothetical protein |
| AE004091_3174965 | AAG06209.1 | 26410 | COG0625 | Glutathione S-transferase | probable glutathione S-transferase |
| AE004091_3166546 | AAG06201.1 | 26410 | COG0625 | Glutathione S-transferase | probable glutathione S-transferase |
| AE004091_534196 | AAG03862.1 | 26410 | COG0625 | Glutathione S-transferase | probable glutathione S-transferase |
| AE004091_1286990 | AAG04574.1 | 26410 | COG0625 | Glutathione S-transferase | probable glutathione S-transferase |
| AE004091_2791219 | AAG05861.1 | 26410 | COG0625 | Glutathione S-transferase | probable glutathione S-transferase |
| AE004091_3398103 | AAG06423.1 | 26410 | COG0625 | Glutathione S-transferase | probable glutathione S-transferase |
| AE004091_4961569 | AAG07816.1 | 26410 | COG0625 | Glutathione S-transferase | stringent starvation protein A |
| AE004091_2195494 | AAG05395.1 | 26410 | COG0625 | Glutathione S-transferase | maleylacetoacetate isomerase |
| AE004091_2060566 | AAG05279.1 | 26410 | COG0625 | Glutathione S-transferase | probable glutathione S-transferase |
| AE004091_1766285 | AAG05012.1 | 26410 | COG0625 | Glutathione S-transferase | conserved hypothetical protein |
| AE004091_1801851 | AAG05044.1 | 26410 | COG0625 | Glutathione S-transferase | probable glutathione S-transferase |
| AE004091_1122340 | AAG04422.1 | 26410 | COG0625 | Glutathione S-transferase | probable glutathione S-transferase |
| AE004091_527324 | AAG03856.1 | 26410 | COG0625 | Glutathione S-transferase | conserved hypothetical protein |
| AE004091_3614303 | AAG06615.1 | 33435 | COG0652 | Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family | peptidyl-prolyl cis-trans isomerase A |
| AE004091_1942447 | AAG05182.1 | 33435 | COG0652 | Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family | peptidyl-prolyl cis-trans isomerase B |
| AE004091_1954069 | AAG05190.1 | 248 | COG0740 | Protease subunit of ATP-dependent Clp proteases | ATP-dependent Clp protease proteolytic subunit |
| AE004091_3729470 | AAG06714.1 | 248 | COG0740 | Protease subunit of ATP-dependent Clp proteases | probable Clp-family ATP-dependent protease |
| AE004091_4673037 | AAG07563.1 | 13635 | COG0760 | Parvulin-like peptidyl-prolyl isomerase | peptidyl-prolyl cis-trans isomerase C2 |
| AE004091_2182116 | AAG05384.1 | 13635 | COG0760 | Parvulin-like peptidyl-prolyl isomerase | peptidyl-prolyl cis-trans isomerase C1 |
| AE004091_5106015 | AAG07946.1 | 10939 | COG1047 | FKBP-type peptidyl-prolyl cis-trans isomerases 2 | probable peptidyl-prolyl cis-trans isomerase, FkbP-type |
| AE004091_913086 | AAG04226.1 | 10939 | COG1047 | FKBP-type peptidyl-prolyl cis-trans isomerases 2 | peptidyl-prolyl cis-trans isomerase SlyD |
| AE004091_1954815 | AAG05191.1 | 3207 | COG1219 | ATP-dependent protease Clp, ATPase subunit | ATP-dependent Clp protease ATP-binding subunit ClpX |
| AE004091_5693137 | AAG08439.1 | 3207 | COG1220 | ATP-dependent protease HslVU (ClpYQ), ATPase subunit | heat shock protein HslU |
| AE004091_1092025 | AAG04397.1 | 32187 | COG1225 | Peroxiredoxin | bacterioferritin comigratory protein |
| AE004091_73468 | AAG03449.1 | 13666 | COG1764 | Predicted redox protein, regulator of disulfide bond formation | osmotically inducible protein OsmC |
| AE004091_3203997 | AAG06238.1 | 13666 | COG1764 | Predicted redox protein, regulator of disulfide bond formation | organic hydroperoxide resistance protein |
| AE004091_2859776 | AAG05920.1 | 32187 | COG2077 | Peroxiredoxin | thiol peroxidase |
| AE004091_5623039 | AAG08390.1 | 13292 | COG2192 | Predicted carbamoyl transferase, NodU family | probable carbamoyl transferase |
| AE004091_2267638 | AAG05457.1 | 13292 | COG2192 | Predicted carbamoyl transferase, NodU family | probable carbamoyl transferase |
| AE004091_2960455 | AAG06005.1 | 12091 | COG2360 | Leu/Phe-tRNA-protein transferase | leucyl/phenylalanyl-tRNA-protein transferase |
| AE004091_2961190 | AAG06006.1 | 12091 | COG2935 | Putative arginyl-tRNA:protein arginylyltransferase | hypothetical protein |
| AE004091_4622811 | AAG07520.1 | 11914 | COG3278 | Cbb3-type cytochrome oxidase, subunit 1 | cytochrome c oxidase subunit (cbb3-type) |
| AE004091_2015139 | AAG05245.1 | 11914 | COG3278 | Cbb3-type cytochrome oxidase, subunit 1 | probable cytochrome oxidase subunit |
| AE004091_1691327 | AAG04943.1 | 11914 | COG3278 | Cbb3-type cytochrome oxidase, subunit 1 | probable cytochrome oxidase subunit (cbb3-type) |
| AE004091_1694852 | AAG04946.1 | 11914 | COG3278 | Cbb3-type cytochrome oxidase, subunit 1 | probable cytochrome oxidase subunit (cbb3-type) |
| AE004091_72680 | AAG03448.1 | 24014 | COG3531 | Predicted protein-disulfide isomerase | hypothetical protein |
| AE004091_937437 | AAG04248.1 | 24014 | COG3531 | Predicted protein-disulfide isomerase | hypothetical protein |
| AE004091_5049768 | AAG07900.1 | 10538 | COG3555 | Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases | lipopolysaccharide biosynthetic protein LpxO1 |
| AE004091_1026274 | AAG04325.1 | 10538 | COG3555 | Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases | lipopolysaccharide biosynthetic protein LpxO2 |
| Excluded Genes in pseudomonasaeruginosapao1 : O |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| AE004091_4163889 | AAG07104.1 | 14417 | COG0545 | FKBP-type peptidyl-prolyl cis-trans isomerases 1 | probable peptidyl-prolyl cis-trans isomerase, FkbP-type |
| AE004091_3649704 | AAG06650.1 | 14417 | COG0545 | FKBP-type peptidyl-prolyl cis-trans isomerases 1 | probable peptidyl-prolyl cis-trans isomerase, FkbP-type |
| AE004091_5120634 | AAG07960.1 | 14417 | COG0545 | FKBP-type peptidyl-prolyl cis-trans isomerases 1 | peptidyl-prolyl cis-trans isomerase FklB |
| AE004091_5916226 | AAG08639.1 | 14417 | COG0545 | FKBP-type peptidyl-prolyl cis-trans isomerases 1 | probable peptidyl-prolyl cis-trans isomerase, FkbP-type |
| AE004091_4126163 | AAG07073.1 | 34290 | COG1214 | Inactive homolog of metal-dependent proteases, putative molecular chaperone | conserved hypothetical protein |
