| All COGs for vibriocholerae_n16961_o1 : M |
| Genes (#) | COG | COG description |
| 2 | COG0329 | Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
| 1 | COG0451 | Nucleoside-diphosphate-sugar epimerases |
| 1 | COG0481 | Membrane GTPase LepA |
| 2 | COG0668 | Small-conductance mechanosensitive channel |
| 5 | COG0739 | Membrane proteins related to metalloendopeptidases |
| 2 | COG0773 | UDP-N-acetylmuramate-alanine ligase |
| 2 | COG0787 | Alanine racemase |
| 5 | COG0845 | Membrane-fusion protein |
| 1 | COG1087 | UDP-glucose 4-epimerase |
| 1 | COG1134 | ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
| 2 | COG1346 | Putative effector of murein hydrolase |
| 2 | COG1560 | Lauroyl/myristoyl acyltransferase |
| 2 | COG1686 | D-alanyl-D-alanine carboxypeptidase |
| 4 | COG3040 | Bacterial lipocalin |
| Included Genes in vibriocholerae_n16961_o1 : M |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| AE003852_2306459 | AAF95302.1 | 33830 | COG0329 | Dihydrodipicolinate synthase/N-acetylneuraminate lyase | dihydrodipicolinate synthase |
| AE003852_1926196 | AAF94925.1 | 33830 | COG0329 | Dihydrodipicolinate synthase/N-acetylneuraminate lyase | N-acetylneuraminate lyase, putative |
| AE003852_245143 | AAF93416.1 | 15009 | COG0451 | Nucleoside-diphosphate-sugar epimerases | ADP-L-glycero-D-mannoheptose-6-epimerase |
| AE003852_2645187 | AAF95605.1 | 1836 | COG0481 | Membrane GTPase LepA | GTP-binding protein LepA |
| AE003852_510777 | AAF93653.1 | 23016 | COG0668 | Small-conductance mechanosensitive channel | conserved hypothetical protein |
| AE003852_1885670 | AAF94901.1 | 23016 | COG0668 | Small-conductance mechanosensitive channel | conserved hypothetical protein |
| AE003853_993354 | AAF96937.1 | 19672 | COG0739 | Membrane proteins related to metalloendopeptidases | tagE protein |
| AE003852_904648 | AAF94006.1 | 19672 | COG0739 | Membrane proteins related to metalloendopeptidases | tagE protein |
| AE003852_535418 | AAF93673.1 | 7789 | COG0739 | Membrane proteins related to metalloendopeptidases | conserved hypothetical protein |
| AE003853_89148 | AAF95993.1 | 7789 | COG0739 | Membrane proteins related to metalloendopeptidases | conserved hypothetical protein |
| AE003852_670598 | AAF93796.1 | 7789 | COG0739 | Membrane proteins related to metalloendopeptidases | conserved hypothetical protein |
| AE003852_2723240 | AAF95683.1 | 31870 | COG0773 | UDP-N-acetylmuramate-alanine ligase | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase |
| AE003852_2568493 | AAF95543.1 | 31870 | COG0773 | UDP-N-acetylmuramate-alanine ligase | UDP-N-acetylmuramate--alanine ligase |
| AE003852_1393726 | AAF94470.1 | 25522 | COG0787 | Alanine racemase | alanine racemase, putative |
| AE003852_387972 | AAF93545.1 | 25522 | COG0787 | Alanine racemase | alanine racemase, biosynthetic |
| AE003852_1809979 | AAF94825.1 | 19373 | COG0845 | Membrane-fusion protein | multidrug resistance protein, putative |
| AE003852_1808898 | AAF94824.1 | 19373 | COG0845 | Membrane-fusion protein | periplasmic linker protein, putative |
| AE003852_1891336 | AAF94906.1 | 19373 | COG0845 | Membrane-fusion protein | periplasmic linker protein, putative |
| AE003852_162541 | AAF93341.1 | 33402 | COG0845 | Membrane-fusion protein | conserved hypothetical protein |
| AE003852_974049 | AAF94075.1 | 33402 | COG0845 | Membrane-fusion protein | conserved hypothetical protein |
| AE003853_716793 | AAF96672.1 | 15009 | COG1087 | UDP-glucose 4-epimerase | UDP-glucose 4-epimerase |
| AE003852_253651 | AAF93423.1 | 35629 | COG1134 | ABC-type polysaccharide/polyol phosphate transport system, ATPase component | lipopolysaccharide/O-antigen transport protein |
| AE003852_2260275 | AAF95246.1 | 2760 | COG1346 | Putative effector of murein hydrolase | conserved hypothetical protein |
| AE003852_1306118 | AAF94391.1 | 2760 | COG1346 | Putative effector of murein hydrolase | conserved hypothetical protein |
| AE003852_220385 | AAF93389.1 | 21891 | COG1560 | Lauroyl/myristoyl acyltransferase | lipid A biosynthesis lauroyl acyltransferase |
| AE003852_219397 | AAF93388.1 | 21891 | COG1560 | Lauroyl/myristoyl acyltransferase | lipid A biosynthesis (kdo)2-(lauroyl)-lipid IVA acyltransferase |
| AE003852_1011038 | AAF94109.1 | 4276 | COG1686 | D-alanyl-D-alanine carboxypeptidase | D-alanyl-D-alanine carboxypeptidase |
| AE003853_288819 | AAF96181.1 | 4276 | COG1686 | D-alanyl-D-alanine carboxypeptidase | D-alanyl-D-alanine carboxypeptidase |
| AE003853_343997 | AAF96258.1 | 21365 | COG3040 | Bacterial lipocalin | lipoprotein Blc |
| AE003853_325225 | AAF96225.1 | 21365 | COG3040 | Bacterial lipocalin | lipoprotein Blc |
| AE003853_378083 | AAF96312.1 | 21365 | COG3040 | Bacterial lipocalin | lipoprotein Blc |
| AE003853_398645 | AAF96349.1 | 21365 | COG3040 | Bacterial lipocalin | lipoprotein Blc |
| Excluded Genes in vibriocholerae_n16961_o1 : M |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| AE003853_366171 | AAF96293.1 | 34290 | COG1247 | Sortase and related acyltransferases | toxin resistance protein |
| AE003853_959181 | AAF96904.1 | 25417 | COG3203 | Outer membrane protein (porin) | outer membrane protein, putative |
| AE003852_674828 | AAF93799.1 | 25417 | COG3203 | Outer membrane protein (porin) | outer membrane protein OmpU |
