| All COGs for escherichiacolio157h7_edl933 : M |
| Genes (#) | COG | COG description |
| 2 | COG0329 | Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
| 3 | COG0399 | Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
| 4 | COG0451 | Nucleoside-diphosphate-sugar epimerases |
| 1 | COG0481 | Membrane GTPase LepA |
| 2 | COG0739 | Membrane proteins related to metalloendopeptidases |
| 2 | COG0741 | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
| 2 | COG0773 | UDP-N-acetylmuramate-alanine ligase |
| 2 | COG0787 | Alanine racemase |
| 4 | COG0791 | Cell wall-associated hydrolases (invasion-associated proteins) |
| 1 | COG0794 | Predicted sugar phosphate isomerase involved in capsule formation |
| 3 | COG0818 | Diacylglycerol kinase |
| 1 | COG0836 | Mannose-1-phosphate guanylyltransferase |
| 5 | COG0845 | Membrane-fusion protein |
| 2 | COG0860 | N-acetylmuramoyl-L-alanine amidase |
| 1 | COG1087 | UDP-glucose 4-epimerase |
| 1 | COG1088 | dTDP-D-glucose 4,6-dehydratase |
| 2 | COG1089 | GDP-D-mannose dehydratase |
| 2 | COG1181 | D-alanine-D-alanine ligase and related ATP-grasp enzymes |
| 1 | COG1209 | dTDP-glucose pyrophosphorylase |
| 2 | COG1210 | UDP-glucose pyrophosphorylase |
| 2 | COG1292 | Choline-glycine betaine transporter |
| 2 | COG1442 | Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases |
| 4 | COG1538 | Outer membrane protein |
| 3 | COG1560 | Lauroyl/myristoyl acyltransferase |
| 2 | COG1596 | Periplasmic protein involved in polysaccharide export |
| 3 | COG1686 | D-alanyl-D-alanine carboxypeptidase |
| 2 | COG3065 | Starvation-inducible outer membrane lipoprotein |
| 1 | COG3206 | Uncharacterized protein involved in exopolysaccharide biosynthesis |
| 12 | COG3209 | Rhs family protein |
| Included Genes in escherichiacolio157h7_edl933 : M |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| AE005174_4175145 | AAG58353.1 | 33830 | COG0329 | Dihydrodipicolinate synthase/N-acetylneuraminate lyase | N-acetylneuraminate lyase (aldolase); catabolism of sialic acid; not K-12? |
| AE005174_3384809 | AAG57588.1 | 33830 | COG0329 | Dihydrodipicolinate synthase/N-acetylneuraminate lyase | dihydrodipicolinate synthase |
| AE005174_2852333 | AAG57096.1 | 23159 | COG0399 | Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis | perosamine synthetase |
| AE005174_3166362 | AAG57384.1 | 23159 | COG0399 | Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis | putative enzyme |
| AE005174_4837535 | AAG58986.1 | 23159 | COG0399 | Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis | putative regulator |
| AE005174_2871809 | AAG57112.1 | 15009 | COG0451 | Nucleoside-diphosphate-sugar epimerases | putative nucleotide di-P-sugar epimerase or dehydratase |
| AE005174_4609801 | AAG58766.1 | 15009 | COG0451 | Nucleoside-diphosphate-sugar epimerases | ADP-L-glycero-D-mannoheptose-6-epimerase |
| AE005174_2848988 | AAG57093.1 | 15009 | COG0451 | Nucleoside-diphosphate-sugar epimerases | fucose synthetase |
| AE005174_1038512 | AAG55250.1 | 15009 | COG0451 | Nucleoside-diphosphate-sugar epimerases | putative nucleotide di-P-sugar epimerase or dehydratase |
| AE005174_3495547 | AAG57685.1 | 1836 | COG0481 | Membrane GTPase LepA | GTP-binding elongation factor, may be inner membrane protein |
| AE005174_3804815 | AAG57994.1 | 14981 | COG0739 | Membrane proteins related to metalloendopeptidases | putative lipoprotein |
| AE005174_3655433 | AAG57849.1 | 14981 | COG0739 | Membrane proteins related to metalloendopeptidases | lipoprotein |
| AE005174_3783878 | AAG57967.1 | 25785 | COG0741 | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) | |
| AE005174_4683783 | AAG58843.1 | 25785 | COG0741 | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) | |
| AE005174_105371 | AAG54395.1 | 31870 | COG0773 | UDP-N-acetylmuramate-alanine ligase | L-alanine adding enzyme, UDP-N-acetyl-muramate:alanine ligase |
| AE005174_5341249 | AAG59430.1 | 31870 | COG0773 | UDP-N-acetylmuramate-alanine ligase | putative ligase |
| AE005174_5148919 | AAG59251.1 | 25522 | COG0787 | Alanine racemase | alanine racemase 1 |
| AE005174_1771805 | AAG56041.1 | 25522 | COG0787 | Alanine racemase | alanine racemase 2, catabolic |
| AE005174_2467180 | AAG56695.1 | 20922 | COG0791 | Cell wall-associated hydrolases (invasion-associated proteins) | lipoprotein |
| AE005174_3076175 | AAG57313.1 | 20922 | COG0791 | Cell wall-associated hydrolases (invasion-associated proteins) | putative lipoprotein |
| AE005174_284678 | AAG54552.1 | 20922 | COG0791 | Cell wall-associated hydrolases (invasion-associated proteins) | putative lipoprotein |
| AE005174_2409354 | AAG56644.1 | 20922 | COG0791 | Cell wall-associated hydrolases (invasion-associated proteins) | putative lipoprotein |
| AE005174_4150833 | AAG58331.1 | 18387 | COG0794 | Predicted sugar phosphate isomerase involved in capsule formation | putative isomerase |
| AE005174_1075701 | AAG55284.1 | 16909 | COG0818 | Diacylglycerol kinase | putative diacylglycerol kinase |
| AE005174_1471308 | AAG55693.1 | 16909 | COG0818 | Diacylglycerol kinase | putative diacylglycerol kinase |
| AE005174_5139803 | AAG59241.1 | 16909 | COG0818 | Diacylglycerol kinase | diacylglycerol kinase |
| AE005174_2847046 | AAG57091.1 | 34716 | COG0836 | Mannose-1-phosphate guanylyltransferase | mannose-1-P guanosyltransferase |
| AE005174_4216039 | AAG58393.1 | 33402 | COG0845 | Membrane-fusion protein | transmembrane protein affects septum formation and cell membrane permeability |
| AE005174_2233114 | AAG56521.1 | 33402 | COG0845 | Membrane-fusion protein | putative efflux pump |
| AE005174_4468592 | AAG58654.1 | 33402 | COG0845 | Membrane-fusion protein | putative membrane protein |
| AE005174_550494 | AAG54812.1 | 33402 | COG0845 | Membrane-fusion protein | acridine efflux pump |
| AE005174_2899519 | AAG57137.1 | 33402 | COG0845 | Membrane-fusion protein | putative membrane protein |
| AE005174_5279773 | AAG59365.1 | 20185 | COG0860 | N-acetylmuramoyl-L-alanine amidase | N-acetylmuramoyl-l-alanine amidase II; a murein hydrolase |
| AE005174_3737453 | AAG57928.1 | 20185 | COG0860 | N-acetylmuramoyl-L-alanine amidase | putative amidase |
| AE005174_876559 | AAG55088.1 | 15009 | COG1087 | UDP-glucose 4-epimerase | UDP-galactose-4-epimerase |
| AE005174_4834911 | AAG58983.1 | 15009 | COG1088 | dTDP-D-glucose 4,6-dehydratase | dTDP-glucose 4,6-dehydratase |
| AE005174_2872777 | AAG57113.1 | 5814 | COG1089 | GDP-D-mannose dehydratase | GDP-D-mannose dehydratase |
| AE005174_2849956 | AAG57094.1 | 5814 | COG1089 | GDP-D-mannose dehydratase | GDP-mannose dehydratase |
| AE005174_106839 | AAG54396.1 | 16604 | COG1181 | D-alanine-D-alanine ligase and related ATP-grasp enzymes | D-alanine-D-alanine ligase B, affects cell division |
| AE005174_459610 | AAG54727.1 | 16604 | COG1181 | D-alanine-D-alanine ligase and related ATP-grasp enzymes | |
| AE005174_4835997 | AAG58984.1 | 3828 | COG1209 | dTDP-glucose pyrophosphorylase | glucose-1-phosphate thymidylyltransferase |
| AE005174_1828437 | AAG56093.1 | 3828 | COG1210 | UDP-glucose pyrophosphorylase | glucose-1-phosphate uridylyltransferase |
| AE005174_2857805 | AAG57101.1 | 3828 | COG1210 | UDP-glucose pyrophosphorylase | homolog of Salmonella UTP--glucose-1-P uridyltransferase, probably a UDP-gal transferase |
| AE005174_377129 | AAG54656.1 | 18770 | COG1292 | Choline-glycine betaine transporter | high-affinity choline transport |
| AE005174_2560218 | AAG56790.1 | 18770 | COG1292 | Choline-glycine betaine transporter | putative transport protein |
| AE005174_4616948 | AAG58773.1 | 5942 | COG1442 | Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases | putative LPS biosynthesis enzyme |
| AE005174_4615177 | AAG58771.1 | 5942 | COG1442 | Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases | putative LPS biosynthesis enzyme |
| AE005174_678042 | AAG54905.1 | 33634 | COG1538 | Outer membrane protein | putative resistance protein |
| AE005174_3027501 | AAG57270.1 | 33634 | COG1538 | Outer membrane protein | putative outer membrane protein |
| AE005174_2228980 | AAG56518.1 | 33634 | COG1538 | Outer membrane protein | partial putative outer membrane channel protein |
| AE005174_5182232 | AAG59278.1 | 33634 | COG1538 | Outer membrane protein | putative enzyme |
| AE005174_1559889 | AAG55800.1 | 21891 | COG1560 | Lauroyl/myristoyl acyltransferase | |
| AE005174_3293670 | AAG57504.1 | 21891 | COG1560 | Lauroyl/myristoyl acyltransferase | putative heat shock protein |
| AE005174_2616259 | AAG56845.1 | 21891 | COG1560 | Lauroyl/myristoyl acyltransferase | suppressor of htrB, heat shock protein |
| AE005174_1308612 | AAG55531.1 | 7602 | COG1596 | Periplasmic protein involved in polysaccharide export | putative function in exopolysaccharide production |
| AE005174_2881691 | AAG57122.1 | 7602 | COG1596 | Periplasmic protein involved in polysaccharide export | putative polysaccharide export protein |
| AE005174_1007672 | AAG55215.1 | 4276 | COG1686 | D-alanyl-D-alanine carboxypeptidase | D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6 |
| AE005174_743890 | AAG54966.1 | 4276 | COG1686 | D-alanyl-D-alanine carboxypeptidase | D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding protein 5 |
| AE005174_2824098 | AAG57069.1 | 4276 | COG1686 | D-alanyl-D-alanine carboxypeptidase | penicillin binding protein 6b |
| AE005174_2566982 | AAG56795.1 | 4813 | COG3065 | Starvation-inducible outer membrane lipoprotein | putative outer membrane protein |
| AE005174_4454266 | AAG58638.1 | 4813 | COG3065 | Starvation-inducible outer membrane lipoprotein | outer membrane protein induced after carbon starvation |
| AE005174_1305978 | AAG55529.1 | 8163 | COG3206 | Uncharacterized protein involved in exopolysaccharide biosynthesis | orf, hypothetical protein |
| AE005174_4997639 | AAG59132.1 | 22364 | COG3209 | Rhs family protein | |
| AE005174_2042056 | AAG56317.1 | 22364 | COG3209 | Rhs family protein | unknown protein associated with Rhs element |
| AE005174_812675 | AAG55024.1 | 7145 | COG3209 | Rhs family protein | |
| AE005174_273792 | AAG54540.1 | 7145 | COG3209 | Rhs family protein | |
| AE005174_267079 | AAG54537.1 | 7145 | COG3209 | Rhs family protein | |
| AE005174_616751 | AAG54854.1 | 7145 | COG3209 | Rhs family protein | |
| AE005174_807792 | AAG55021.1 | 7145 | COG3209 | Rhs family protein | rhsC protein in rhs element, interrupted |
| AE005174_4998868 | AAG59134.1 | 7145 | COG3209 | Rhs family protein | |
| AE005174_2040411 | AAG56316.1 | 7145 | COG3209 | Rhs family protein | unknown protein associated with Rhs element |
| AE005174_2038357 | AAG56315.1 | 7145 | COG3209 | Rhs family protein | unknown protein associated with Rhs element |
| AE005174_4577155 | AAG58739.1 | 7145 | COG3209 | Rhs family protein | orf, hypothetical protein |
| AE005174_4572111 | AAG58737.1 | 7145 | COG3209 | Rhs family protein | rhsA protein in rhs element |
| Excluded Genes in escherichiacolio157h7_edl933 : M |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| AE005174_1286409 | AAG55510.1 | 7506 | COG0791 | Cell wall-associated hydrolases (invasion-associated proteins) | putative tail component encoded by cryptic prophage CP-933M |
| AE005174_1920148 | AAG56209.1 | 7506 | COG0791 | Cell wall-associated hydrolases (invasion-associated proteins) | putative tail component of prophage CP-933O |
| AE005174_1286761 | AAG55511.1 | 8896 | COG0791 | Cell wall-associated hydrolases (invasion-associated proteins) | putative tail component encoded by cryptic prophage CP-933M; partial |
| AE005174_2053863 | AAG56327.1 | 34290 | COG1247 | Sortase and related acyltransferases | putative resistance protein |
| AE005174_296157 | AAG54566.1 | 25417 | COG3203 | Outer membrane protein (porin) | outer membrane pore protein E (E,Ic,NmpAB) |
| AE005174_1204588 | AAG55414.1 | 25417 | COG3203 | Outer membrane protein (porin) | outer membrane protein 1a (Ia;b;F) |
| AE005174_3115900 | AAG57350.1 | 25417 | COG3203 | Outer membrane protein (porin) | outer membrane protein 1b (Ib;c) |
| AE005174_2734419 | AAG56979.1 | 25417 | COG3203 | Outer membrane protein (porin) | putative outer membrane protein |
| AE005174_2021021 | AAG56297.1 | 25417 | COG3203 | Outer membrane protein (porin) | putative outer membrane porin protein |
| AE005174_2114430 | AAG56384.1 | 25417 | COG3203 | Outer membrane protein (porin) | partial putative outer membrane protein |
| AE005174_2733778 | AAG56978.1 | 25417 | COG3203 | Outer membrane protein (porin) | putative outer membrane protein |
