| All COGs for xylellafastidiosa9a5c : L |
| Genes (#) | COG | COG description |
| 2 | COG0084 | Mg-dependent DNase |
| 2 | COG0187 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
| 2 | COG0188 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
| 2 | COG0210 | Superfamily I DNA and RNA helicases |
| 2 | COG0266 | Formamidopyrimidine-DNA glycosylase |
| 2 | COG0358 | DNA primase (bacterial type) |
| 3 | COG0513 | Superfamily II DNA and RNA helicases |
| 3 | COG0550 | Topoisomerase IA |
| 2 | COG0708 | Exonuclease III |
| 3 | COG0776 | Bacterial nucleoid DNA-binding protein |
| 2 | COG0863 | DNA modification methylase |
| Included Genes in xylellafastidiosa9a5c : L |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| AE003849_187211 | AAF82990.1 | 3753 | COG0084 | Mg-dependent DNase | conserved hypothetical protein |
| AE003849_1818848 | AAF84719.1 | 3753 | COG0084 | Mg-dependent DNase | type V secretory pathway protein |
| AE003849_4763 | AAF82818.1 | 4233 | COG0187 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit | DNA gyrase subunit B |
| AE003849_1237020 | AAF84095.1 | 4233 | COG0187 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit | topoisomerase IV subunit B |
| AE003849_1299220 | AAF84162.1 | 1817 | COG0188 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit | topoisomerase IV subunit |
| AE003849_2429336 | AAF85349.1 | 1817 | COG0188 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit | DNA gyrase subunit A |
| AE003849_46805 | AAF82863.1 | 18279 | COG0210 | Superfamily I DNA and RNA helicases | DNA helicase II |
| AE003849_2556133 | AAF85477.1 | 18279 | COG0210 | Superfamily I DNA and RNA helicases | ATP-dependent DNA helicase |
| AE003849_177524 | AAF82983.1 | 31879 | COG0266 | Formamidopyrimidine-DNA glycosylase | formamidopyrimidine DNA glycosylase |
| AE003849_71808 | AAF82884.1 | 31879 | COG0266 | Formamidopyrimidine-DNA glycosylase | formamidopyrimidine DNA glycosylase |
| AE003849_499912 | AAF83315.1 | 10829 | COG0358 | DNA primase (bacterial type) | hypothetical protein |
| AE003849_2016462 | AAF84921.1 | 10829 | COG0358 | DNA primase (bacterial type) | hypothetical protein |
| AE003849_262848 | AAF83065.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | ATP-dependent RNA helicase |
| AE003849_201673 | AAF83005.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | ATP-dependent RNA helicase |
| AE003849_2574884 | AAF85493.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | ATP-dependent RNA helicase |
| AE003849_1694565 | AAF84584.1 | 33765 | COG0550 | Topoisomerase IA | DNA topoisomerase III |
| AE003849_1761182 | AAF84651.1 | 33765 | COG0550 | Topoisomerase IA | hypothetical protein |
| AE003849_1958708 | AAF84859.1 | 33765 | COG0550 | Topoisomerase IA | conjugal transfer protein |
| AE003849_165137 | AAF82977.1 | 33302 | COG0708 | Exonuclease III | exodeoxyribonuclease |
| AE003849_1836138 | AAF84735.1 | 33302 | COG0708 | Exonuclease III | exodeoxyribonuclease III |
| AE003849_2320967 | AAF85236.1 | 34486 | COG0776 | Bacterial nucleoid DNA-binding protein | integration host factor, beta subunit |
| AE003849_698556 | AAF83553.1 | 34486 | COG0776 | Bacterial nucleoid DNA-binding protein | integration host factor, alpha subunit |
| AE003849_1142556 | AAF84000.1 | 34486 | COG0776 | Bacterial nucleoid DNA-binding protein | histone-like protein |
| AE003849_2183736 | AAF85096.1 | 4331 | COG0863 | DNA modification methylase | DNA methylase |
| AE003849_2197200 | AAF85112.1 | 4331 | COG0863 | DNA modification methylase | site-specific DNA-methyltransferase |
| Excluded Genes in xylellafastidiosa9a5c : L |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| AE003849_650674 | AAF83490.1 | 20172 | COG0553 | Superfamily II DNA/RNA helicases, SNF2 family | phage-related protein |
| AE003849_2181723 | AAF85094.1 | 20172 | COG0553 | Superfamily II DNA/RNA helicases, SNF2 family | phage-related protein |
| AE003849_2401429 | AAF85326.1 | 20172 | COG0553 | Superfamily II DNA/RNA helicases, SNF2 family | phage-related protein |
| AE003849_1514347 | AAF84364.1 | 12385 | COG0582 | Integrase | phage-related protein |
| AE003849_2021692 | AAF84931.1 | 12385 | COG0582 | Integrase | phage-related protein |
| AE003849_1585980 | AAF84451.1 | 12385 | COG0582 | Integrase | phage-related integrase |
| AE003849_2177071 | AAF85087.1 | 12385 | COG0582 | Integrase | phage-related integrase |
| AE003849_2403249 | AAF85328.1 | 12385 | COG0582 | Integrase | phage-related integrase |
| AE003849_649115 | AAF83488.1 | 28194 | COG0582 | Integrase | phage-related integrase |
| AE003849_926826 | AAF83778.1 | 28194 | COG0582 | Integrase | hypothetical protein |
| AE003849_1428586 | AAF84292.1 | 32603 | COG0582 | Integrase | site-specific recombinase |
| AE003849_1372648 | AAF84234.1 | 32603 | COG0582 | Integrase | integrase/recombinase |
| AE003849_488523 | AAF83292.1 | 33594 | COG0629 | Single-stranded DNA-binding protein | single-stranded DNA binding protein |
| AE003849_1346189 | AAF84201.1 | 33594 | COG0629 | Single-stranded DNA-binding protein | single-stranded DNA binding protein |
| AE003849_1515650 | AAF84367.1 | 33594 | COG0629 | Single-stranded DNA-binding protein | single-stranded DNA binding protein |
| AE003849_1587265 | AAF84453.1 | 33594 | COG0629 | Single-stranded DNA-binding protein | single-stranded DNA binding protein |
