| All COGs for staphylococcusaureussubsp_n315 : L |
| Genes (#) | COG | COG description |
| 2 | COG0187 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
| 2 | COG0188 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
| 2 | COG0389 | Nucleotidyltransferase/DNA polymerase involved in DNA repair |
| 2 | COG0513 | Superfamily II DNA and RNA helicases |
| 2 | COG0514 | Superfamily II DNA helicase |
| 2 | COG1061 | DNA or RNA helicases of superfamily II |
| 2 | COG1525 | Micrococcal nuclease (thermonuclease) homologs |
| Included Genes in staphylococcusaureussubsp_n315 : L |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| BA000018_1354328 | BAB42446.1 | 4233 | COG0187 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit | topoisomerase IV subunit B |
| BA000018_5034 | BAB41221.1 | 4233 | COG0187 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit | DNA gyrase subunit B |
| BA000018_1356325 | BAB42447.1 | 1817 | COG0188 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit | topoisomerase IV subunit A |
| BA000018_7005 | BAB41222.1 | 1817 | COG0188 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit | DNA gyrase subunit A |
| BA000018_1368387 | BAB42456.1 | 19914 | COG0389 | Nucleotidyltransferase/DNA polymerase involved in DNA repair | |
| BA000018_1956914 | BAB42981.1 | 19914 | COG0389 | Nucleotidyltransferase/DNA polymerase involved in DNA repair | |
| BA000018_2135902 | BAB43168.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | |
| BA000018_1592010 | BAB42650.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | |
| BA000018_1520407 | BAB42575.1 | 2991 | COG0514 | Superfamily II DNA helicase | probable ATP-dependent DNA helicase RecQ |
| BA000018_770345 | BAB41909.1 | 2991 | COG0514 | Superfamily II DNA helicase | probable DNA helicase |
| BA000018_2553138 | BAB43580.1 | 17208 | COG1061 | DNA or RNA helicases of superfamily II | conserved hypothetical protein |
| BA000018_2551608 | BAB43579.1 | 17208 | COG1061 | DNA or RNA helicases of superfamily II | conserved hypothetical protein |
| BA000018_855748 | BAB41979.1 | 12383 | COG1525 | Micrococcal nuclease (thermonuclease) homologs | staphylococcal nuclease |
| BA000018_1321427 | BAB42417.1 | 12383 | COG1525 | Micrococcal nuclease (thermonuclease) homologs | thermonuclease |
| Excluded Genes in staphylococcusaureussubsp_n315 : L |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| BA000018_2202367 | BAB43238.1 | 17194 | COG0582 | Integrase | transposition regulatory protein tnpB |
| BA000018_1688038 | BAB42749.1 | 17194 | COG0582 | Integrase | transposase B for Tn554 |
| BA000018_868090 | BAB42000.1 | 17194 | COG0582 | Integrase | transposase B for Tn554 |
| BA000018_58176 | BAB41269.1 | 17194 | COG0582 | Integrase | transposase B for Tn554 |
| BA000018_2674709 | BAB43692.1 | 17194 | COG0582 | Integrase | transposition regulatory protein tnpB |
| BA000018_2676598 | BAB43693.1 | 23092 | COG0582 | Integrase | transposition regulatory protein tnpA |
| BA000018_2204256 | BAB43239.1 | 23092 | COG0582 | Integrase | transposition regulatory protein tnpA |
| BA000018_1689927 | BAB42750.1 | 23092 | COG0582 | Integrase | transposase A for Tn554 |
| BA000018_867008 | BAB41999.1 | 23092 | COG0582 | Integrase | transposase A for Tn554 |
| BA000018_60065 | BAB41270.1 | 23092 | COG0582 | Integrase | transposase A for Tn554 |
| BA000018_2151442 | BAB43183.1 | 33594 | COG0629 | Single-stranded DNA-binding protein | |
| BA000018_412192 | BAB41578.1 | 33594 | COG0629 | Single-stranded DNA-binding protein | single-strand DNA-binding protein of phage phi PVL |
| BA000018_2036848 | BAB43070.1 | 33594 | COG0629 | Single-stranded DNA-binding protein | single-strand DNA-binding protein |
| BA000018_70209 | BAB41280.1 | 33272 | COG2801 | Transposase and inactivated derivatives | transposase |
| BA000018_1855378 | BAB42890.1 | 33272 | COG2801 | Transposase and inactivated derivatives | truncated transposase |
| BA000018_36435 | BAB41243.1 | 14811 | COG3316 | Transposase and inactivated derivatives | transposase for IS-like element |
| BA000018_41781 | BAB41252.1 | 14811 | COG3316 | Transposase and inactivated derivatives | transposase for IS-like element |
| BA000018_2134414 | BAB43167.1 | 5111 | COG3464 | Transposase and inactivated derivatives | transposase |
| BA000018_2566795 | BAB43592.1 | 5111 | COG3464 | Transposase and inactivated derivatives | transposase |
| BA000018_678300 | BAB41818.1 | 5111 | COG3464 | Transposase and inactivated derivatives | transposase for IS1181 |
| BA000018_893906 | BAB42026.1 | 5111 | COG3464 | Transposase and inactivated derivatives | transposase for IS1181 |
| BA000018_1139084 | BAB42257.1 | 5111 | COG3464 | Transposase and inactivated derivatives | transposase for insertion sequence IS1181 |
| BA000018_1761714 | BAB42809.1 | 5111 | COG3464 | Transposase and inactivated derivatives | transposase |
| BA000018_1914806 | BAB42946.1 | 5111 | COG3464 | Transposase and inactivated derivatives | transposase |
| BA000018_426680 | BAB41596.1 | 5111 | COG3464 | Transposase and inactivated derivatives | transposase for IS1181 |
| BA000018_1839605 | BAB42871.1 | 15133 | COG3666 | Transposase and inactivated derivatives | truncated transposase |
| BA000018_1991916 | BAB43009.1 | 15133 | COG3666 | Transposase and inactivated derivatives | truncated transposase |
| BA000018_1395599 | BAB42482.1 | 15560 | COG3666 | Transposase and inactivated derivatives | truncated transposase |
| BA000018_1175212 | BAB42290.1 | 15560 | COG3666 | Transposase and inactivated derivatives | truncated transposase |
| BA000018_1536101 | BAB42590.1 | 32603 | COG4974 | Site-specific recombinase XerD | site-specific recombinase |
| BA000018_1241147 | BAB42347.1 | 32603 | COG4974 | Site-specific recombinase XerD | |
