All COGs for ralstoniasolanacearum_gmi1000 : L
Genes (#)COGCOG description
2COG0084Mg-dependent DNase
2COG01223-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
2COG0187Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
2COG0188Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
3COG0210Superfamily I DNA and RNA helicases
3COG0350Methylated DNA-protein cysteine methyltransferase
2COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymes
4COG0513Superfamily II DNA and RNA helicases
4COG0582Integrase
2COG0587DNA polymerase III, alpha subunit
2COG0708Exonuclease III
5COG0776Bacterial nucleoid DNA-binding protein
3COG1961Site-specific recombinases, DNA invertase Pin homologs
2COG2003DNA repair proteins

Included Genes in ralstoniasolanacearum_gmi1000 : L
gene_idprotein_idgene_familycogcog_descriptionproduct
AL646052_1175768CAD14821.13753COG0084Mg-dependent DNasePROBABLE DEOXYRIBONUCLEASE PROTEIN
AL646052_1922078CAD15489.13753COG0084Mg-dependent DNaseCONSERVED HYPOTHETICAL PROTEIN
AL646052_1225997CAD14870.133426COG01223-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylaseCONSERVED HYPOTHETICAL PROTEIN
AL646052_2777509CAD16276.133426COG01223-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylasePROBABLE DNA-3-METHYLADENINE GLYCOSYLASE PROTEIN
AL646052_3710650CAD16937.14233COG0187Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunitPROBABLE DNA GYRASE (SUBUNIT B) PROTEIN
AL646052_1024879CAD14678.14233COG0187Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunitPROBABLE DNA TOPOISOMERASE IV (SUBUNIT B) PROTEIN
AL646052_1027781CAD14680.11817COG0188Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunitPROBABLE DNA TOPOISOMERASE IV (SUBUNIT A) PROTEIN
AL646052_950444CAD14603.11817COG0188Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunitPROBABLE DNA GYRASE (SUBUNIT A)(TYPE II TOPOISOMERASE) PROTEIN
AL646053_1613931CAD18427.118279COG0210Superfamily I DNA and RNA helicasesPROBABLE ATP-DEPENDENT DNA HELICASE II PROTEIN
AL646052_3540395CAD17077.118279COG0210Superfamily I DNA and RNA helicasesPROBABLE ATP-DEPENDENT DNA HELICASE REP PROTEIN
AL646052_2424741CAD15942.118279COG0210Superfamily I DNA and RNA helicasesPROBABLE DNA HELICASE II PROTEIN
AL646052_2751515CAD16250.131928COG0350Methylated DNA-protein cysteine methyltransferasePROBABLE METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE
AL646052_2775576CAD16273.131928COG0350Methylated DNA-protein cysteine methyltransferasePUTATIVE METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE
AL646052_2713098CAD16213.131928COG0350Methylated DNA-protein cysteine methyltransferasePROBABLE METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE
AL646052_3044163CAD16538.112241COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesPROBABLE MUTATOR MUTT PROTEIN (7,8-DIHYDRO-8-OXOGUANINE-TRIPHOSPHATASE)
AL646052_3031003CAD16524.112241COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesCONSERVED HYPOTHETICAL PROTEIN
AL646052_1000548CAD14654.133241COG0513Superfamily II DNA and RNA helicasesPUTATIVE ATP-DEPENDENT RNA HELICASE PROTEIN
AL646052_582836CAD14067.133241COG0513Superfamily II DNA and RNA helicasesPROBABLE ATP-DEPENDENT RNA HELICASE PROTEIN
AL646052_668879CAD14152.133241COG0513Superfamily II DNA and RNA helicasesPROBABLE ATP-DEPENDENT RNA HELICASE PROTEIN
AL646052_2395039CAD15918.133241COG0513Superfamily II DNA and RNA helicasesPROBABLE ATP-DEPENDENT RNA HELICASE PROTEIN
AL646053_1162206CAD18073.113981COG0582IntegraseHYPOTHETICAL PROTEIN
AL646052_2029858CAD15549.113981COG0582IntegraseHYPOTHETICAL PROTEIN
AL646053_1160702CAD18072.127014COG0582IntegraseHYPOTHETICAL PROTEIN
AL646052_2028354CAD15548.127014COG0582IntegraseHYPOTHETICAL PROTEIN
AL646053_1005261CAD17951.110112COG0587DNA polymerase III, alpha subunitPROBABLE DNA POLYMERASE III (ALPHA CHAIN) PROTEIN
AL646052_2387018CAD15912.110112COG0587DNA polymerase III, alpha subunitPROBABLE DNA POLYMERASE III (ALPHA CHAIN) PROTEIN
AL646052_1708234CAD15295.133302COG0708Exonuclease IIIPROBABLE EXODEOXYRIBONUCLEASE III PROTEIN
AL646052_162230CAD13668.133302COG0708Exonuclease IIIPUTATIVE EXODEOXYRIBONUCLEASE III PROTEIN
AL646052_3618358CAD17147.134486COG0776Bacterial nucleoid DNA-binding proteinPROBABLE HISTONE-LIKE DNA-BINDING PROTEIN HU-BETA (NS1)
AL646052_2728266CAD16228.134486COG0776Bacterial nucleoid DNA-binding proteinPROBABLE DNA-BINDING PROTEIN HU-BETA (NS1) (HU-1)
AL646052_1833103CAD15416.134486COG0776Bacterial nucleoid DNA-binding proteinPROBABLE DNA-BINDING PROTEIN HU-BETA
AL646052_1699590CAD15285.134486COG0776Bacterial nucleoid DNA-binding proteinPROBABLE INTEGRATION HOST FACTOR ALPHA-SUBUNIT (IHF-ALPHA) PROTEIN
AL646052_962338CAD14612.134486COG0776Bacterial nucleoid DNA-binding proteinPUTATIVE INTEGRATION HOST FACTOR BETA-SUBUNIT (IHF-BETA) PROTEIN
AL646052_3430395CAD16959.125501COG1961Site-specific recombinases, DNA invertase Pin homologsPUTATIVE SITE-SPECIFIC INTEGRASE/RESOLVASE PROTEIN
AL646052_937582CAD14593.125501COG1961Site-specific recombinases, DNA invertase Pin homologsPUTATIVE SITE-SPECIFIC INTEGRASE/RECOMBINASE PROTEIN
AL646052_3502812CAD17035.125501COG1961Site-specific recombinases, DNA invertase Pin homologsPUTATIVE SITE-SPECIFIC INTEGRASE PROTEIN
AL646052_2822729CAD16327.15013COG2003DNA repair proteinsCONSERVED HYPOTHETICAL PROTEIN
AL646052_2650253CAD16151.15013COG2003DNA repair proteinsPROBABLE DNA REPAIR PROTEIN RADC

Excluded Genes in ralstoniasolanacearum_gmi1000 : L
gene_idprotein_idgene_familycogcog_descriptionproduct
AL646052_2694535CAD16196.126664COG0582IntegrasePUTATIVE INTEGRASE PROTEIN
AL646052_2054819CAD15573.126664COG0582IntegrasePUTATIVE INTEGRASE PROPHAGE PROTEIN
AL646052_2084602CAD15598.126664COG0582IntegrasePUTATIVE INTEGRASE PROPHAGE PROTEIN
AL646052_1017298CAD14670.126664COG0582IntegrasePROBABLE CP4-LIKE INTEGRASE PROTEIN
AL646052_1781995CAD15357.19857COG0582IntegrasePROBABLE INTEGRASE/RECOMBINASE PROTEIN
AL646052_1669739CAD15256.19857COG0582IntegrasePUTATIVE INTEGRASE/RECOMBINASE PROTEIN
AL646053_710925CAD17721.117654COG0863DNA modification methylaseCONSERVED HYPOTHETICAL PROTEIN
AL646052_886057CAD14547.117654COG0863DNA modification methylaseCONSERVED HYPOTHETICAL PROTEIN
AL646052_2532717CAD16041.133411COG1484DNA replication proteinISRSO6-TRANSPOSASE ORFB PROTEIN
AL646052_276299CAD13776.133411COG1484DNA replication proteinISRSO6-TRANSPOSASE ORFB PROTEIN
AL646053_563974CAD17603.133411COG1484DNA replication proteinISRSO6-TRANSPOSASE ORFB PROTEIN
AL646053_1198057CAD18104.133411COG1484DNA replication proteinISRSO6-TRANSPOSASE ORFB PROTEIN
AL646053_708327CAD17718.132762COG2801Transposase and inactivated derivativesISRSO10-TRANSPOSASE ORFB PROTEIN
AL646052_2530467CAD16038.132762COG2801Transposase and inactivated derivativesISRSO10-TRANSPOSASE ORFB PROTEIN
AL646052_2001545CAD15532.132762COG2801Transposase and inactivated derivativesISRSO10-TRANSPOSASE ORFB PROTEIN
AL646052_1539489CAD15137.132762COG2801Transposase and inactivated derivativesISRSO10-TRANSPOSASE ORFB PROTEIN
AL646053_577528CAD17611.132762COG2801Transposase and inactivated derivativesISRSO10-TRANSPOSASE ORFB PROTEIN
AL646053_688094CAD17699.133272COG2801Transposase and inactivated derivativesISRSO8-TRANSPOSASE ORFB PROTEIN
AL646052_3326442CAD16798.133272COG2801Transposase and inactivated derivativesISRSO11-TRANSPOSASE ORFB PROTEIN
AL646052_2613253CAD16115.133272COG2801Transposase and inactivated derivativesISRSO11-TRANSPOSASE ORFB PROTEIN
AL646052_2456674CAD15972.133272COG2801Transposase and inactivated derivativesISRSO11-TRANSPOSASE ORFB PROTEIN
AL646052_2458072CAD15974.133272COG2801Transposase and inactivated derivativesISRSO8-TRANSPOSASE ORFB PROTEIN
AL646052_2514222CAD16020.133272COG2801Transposase and inactivated derivativesPUTATIVE TRANSPOSASE PROTEIN
AL646052_1661764CAD15251.133272COG2801Transposase and inactivated derivativesISRSO8-TRANSPOSASE ORFB PROTEIN
AL646052_1540188CAD15138.133272COG2801Transposase and inactivated derivativesISRSO11-TRANSPOSASE ORFB PROTEIN
AL646052_622286CAD14108.133272COG2801Transposase and inactivated derivativesISRSO8-TRANSPOSASE ORFB PROTEIN
AL646053_2046904CAD18775.15429COG2801Transposase and inactivated derivativesREMNANT OF A ISRSO16-TRANSPOSASE ORFA PROTEIN
AL646053_2049261CAD18780.15429COG2801Transposase and inactivated derivativesPROBABLE C-TERMINUS OF TISRSO16 ORFA TRANSPOSASE PROTEIN
AL646053_2048587CAD18779.15535COG2801Transposase and inactivated derivativesISRSO16-TRANSPOSASE ORFB PROTEIN
AL646053_1652750CAD18454.15535COG2801Transposase and inactivated derivativesPROBABLE TRANSPOSASE PROTEIN
AL646053_1682940CAD18484.15535COG2801Transposase and inactivated derivativesPROBABLE TRANSPOSASE PROTEIN
AL646053_1547821CAD18368.15535COG2801Transposase and inactivated derivativesISRSO14-TRANSPOSASE ORFB PROTEIN
AL646053_625591CAD17655.15535COG2801Transposase and inactivated derivativesISRSO12-TRANSPOSASE ORFB PROTEIN
AL646052_2910988CAD16413.15535COG2801Transposase and inactivated derivativesISRSO12-TRANSPOSASE ORFB PROTEIN
AL646052_2611716CAD16112.15535COG2801Transposase and inactivated derivativesISRSO14-TRANSPOSASE ORFB PROTEIN
AL646052_1597010CAD15194.15535COG2801Transposase and inactivated derivativesISRSO14-TRANSPOSASE ORFB PROTEIN
AL646052_1542234CAD15141.15535COG2801Transposase and inactivated derivativesISRSO12-TRANSPOSASE ORFB PROTEIN
AL646052_869969CAD14530.15535COG2801Transposase and inactivated derivativesISRSO14-TRANSPOSASE ORFB PROTEIN
AL646053_699723CAD17709.15535COG2801Transposase and inactivated derivativesISRSO16-TRANSPOSASE ORFB PROTEIN
AL646053_2046984CAD18776.15535COG2801Transposase and inactivated derivativesREMNANT OF ISRSO16-TRANSPOSASE ORFB PROTEIN
AL646053_1648707CAD18450.17800COG2801Transposase and inactivated derivativesISRSO12-TRANSPOSASE ORFA PROTEIN
AL646053_1547531CAD18367.17800COG2801Transposase and inactivated derivativesISRSO14-TRANSPOSASE ORFA PROTEIN
AL646053_699424CAD17708.17800COG2801Transposase and inactivated derivativesISRSO16-TRANSPOSASE ORFA PROTEIN
AL646053_625175CAD17654.17800COG2801Transposase and inactivated derivativesISRSO12-TRANSPOSASE ORFA PROTEIN
AL646052_2911842CAD16414.17800COG2801Transposase and inactivated derivativesISRSO12-TRANSPOSASE ORFA PROTEIN
AL646052_1597864CAD15195.17800COG2801Transposase and inactivated derivativesISRSO14-TRANSPOSASE ORFA PROTEIN
AL646052_1541818CAD15140.17800COG2801Transposase and inactivated derivativesISRSO12-TRANSPOSASE ORFA PROTEIN
AL646052_870823CAD14531.17800COG2801Transposase and inactivated derivativesISRSO14-TRANSPOSASE ORFA PROTEIN
AL646052_2612570CAD16113.17800COG2801Transposase and inactivated derivativesISRSO14-TRANSPOSASE ORFA PROTEIN
AL646053_707962CAD17717.132623COG2963Transposase and inactivated derivativesISRSO10-TRANSPOSASE ORFA PROTEIN
AL646053_578373CAD17612.132623COG2963Transposase and inactivated derivativesISRSO10-TRANSPOSASE ORFA PROTEIN
AL646052_2531312CAD16039.132623COG2963Transposase and inactivated derivativesISRSO10-TRANSPOSASE ORFA PROTEIN
AL646052_2002390CAD15533.132623COG2963Transposase and inactivated derivativesISRSO10-TRANSPOSASE ORFA PROTEIN
AL646052_1538878CAD15136.132623COG2963Transposase and inactivated derivativesISRSO10-TRANSPOSASE ORFA PROTEIN
AL646053_687804CAD17698.133231COG2963Transposase and inactivated derivativesISRSO8-TRANSPOSASE ORFA PROTEIN
AL646052_2458959CAD15975.133231COG2963Transposase and inactivated derivativesISRSO8-TRANSPOSASE ORFA PROTEIN
AL646052_2515076CAD16021.133231COG2963Transposase and inactivated derivativesPROBABLE TRANSPOSASE PROTEIN
AL646052_1661338CAD15250.133231COG2963Transposase and inactivated derivativesPUTATIVE TRANSPOSASE-RELATED PROTEIN
AL646052_1662651CAD15252.133231COG2963Transposase and inactivated derivativesISRSO8-TRANSPOSASE ORFA PROTEIN
AL646052_623173CAD14109.133231COG2963Transposase and inactivated derivativesISRSO8-TRANSPOSASE ORFA PROTEIN
AL646052_3327275CAD16799.134800COG2963Transposase and inactivated derivativesISRSO11-TRANSPOSASE ORFA PROTEIN
AL646052_2614086CAD16116.134800COG2963Transposase and inactivated derivativesISRSO11-TRANSPOSASE ORFA PROTEIN
AL646052_1541021CAD15139.134800COG2963Transposase and inactivated derivativesPROBABLE ISRSO11-TRANSPOSASE ORFA PROTEIN
AL646052_2457507CAD15973.134800COG2963Transposase and inactivated derivativesISRSO11-TRANSPOSASE ORFA PROTEIN
AL646053_720130CAD17735.115421COG3039Transposase and inactivated derivatives, IS5 familyISRSO9-TRANSPOSASE PROTEIN
AL646052_3365772CAD16832.115421COG3039Transposase and inactivated derivatives, IS5 familyISRSO9-TRANSPOSASE PROTEIN
AL646052_3395360CAD16854.115421COG3039Transposase and inactivated derivatives, IS5 familyISRSO9-TRANSPOSASE PROTEIN
AL646052_883334CAD14545.115421COG3039Transposase and inactivated derivatives, IS5 familyIRSO9 TRANSPOSASE PROTEIN
AL646052_3695703CAD16918.115421COG3039Transposase and inactivated derivatives, IS5 familyISRSO9-TRANSPOSASE PROTEIN
AL646053_179165CAD17306.115421COG3039Transposase and inactivated derivatives, IS5 familyISRSO9-TRANSPOSASE PROTEIN
AL646053_1486564CAD18330.131311COG3039Transposase and inactivated derivatives, IS5 familyTIS1021-TRANSPOSASE PROTEIN
AL646053_254650CAD17357.131311COG3039Transposase and inactivated derivatives, IS5 familyTIS1021-TRANSPOSASE PROTEIN
AL646052_1820273CAD15406.131311COG3039Transposase and inactivated derivatives, IS5 familyISRSO18-TRANSPOSASE PROTEIN
AL646053_1430593CAD18287.131311COG3039Transposase and inactivated derivatives, IS5 familyISRSO18-TRANSPOSASE PROTEIN
AL646053_1245576CAD18142.133454COG3039Transposase and inactivated derivatives, IS5 familyTIS1421-TRANSPOSASE ORFB PROTEIN
AL646053_717424CAD17733.133454COG3039Transposase and inactivated derivatives, IS5 familyIS1421-TRANSPOSASE ORFB PROTEIN
AL646053_395530CAD17452.133454COG3039Transposase and inactivated derivatives, IS5 familyTIS1421-TRANSPOSASE ORFA PROTEIN
AL646053_101434CAD17244.133454COG3039Transposase and inactivated derivatives, IS5 familyTIS1421-TRANSPOSASE ORFB PROTEIN
AL646053_46308CAD17193.133454COG3039Transposase and inactivated derivatives, IS5 familyTIS1421-TRANSPOSASE ORFB PROTEIN
AL646052_1792212CAD15373.133454COG3039Transposase and inactivated derivatives, IS5 familyTIS1421-TRANSPOSASE ORFB PROTEIN
AL646053_1682133CAD18483.133454COG3293Transposase and inactivated derivativesISRSO1-TRANSPOSASE PROTEIN
AL646053_1245160CAD18141.133454COG3293Transposase and inactivated derivativesPROBABLE TIS1421-TRANSPOSASE ORFA PROTEIN
AL646053_395928CAD17453.133454COG3293Transposase and inactivated derivativesTIS1421-TRANSPOSASE ORFB PROTEIN
AL646053_147355CAD17278.133454COG3293Transposase and inactivated derivativesISRSO1 TRANSPOSASE PROTEIN
AL646053_45892CAD17192.133454COG3293Transposase and inactivated derivativesTIS1421-TRANSPOSASE ORFA PROTEIN
AL646052_3483333CAD17009.133454COG3293Transposase and inactivated derivativesPROBABLE TRANSPOSASE PROTEIN
AL646052_939530CAD14595.133454COG3293Transposase and inactivated derivativesPROBABLE TRANSPOSASE PROTEIN
AL646052_3612040CAD17139.133454COG3293Transposase and inactivated derivativesTRANSPOSASE PROTEIN
AL646052_231914CAD13736.133454COG3293Transposase and inactivated derivativesISRSO1-TRANSPOSASE PROTEIN
AL646052_1059517CAD14711.133454COG3293Transposase and inactivated derivativesISRSO1-TRANSPOSASE PROTEIN
AL646052_1792610CAD15374.133454COG3293Transposase and inactivated derivativesTIS1421-TRANSPOSASE ORFA PROTEIN
AL646052_3460622CAD16987.133454COG3293Transposase and inactivated derivativesTRANSPOSASE PROTEIN
AL646053_101832CAD17245.133454COG3293Transposase and inactivated derivativesTIS1421-TRANSPOSASE ORFA PROTEIN
AL646053_717008CAD17732.133454COG3293Transposase and inactivated derivativesIS1421-TRANSPOSASE ORFA PROTEIN
AL646053_1651943CAD18453.133454COG3293Transposase and inactivated derivativesISRSO1-TRANSPOSASE PROTEIN
AL646052_282838CAD13780.134374COG3328Transposase and inactivated derivativesISRSO7-TRANSPOSASE PROTEIN
AL646053_598845CAD17629.134374COG3328Transposase and inactivated derivativesISRSO7-TRANSPOSASE PROTEIN
AL646053_2087388CAD18826.133791COG3335Transposase and inactivated derivativesISRSO5-TRANSPOSASE PROTEIN
AL646053_1451412CAD18303.133791COG3335Transposase and inactivated derivativesISRSO5-TRANSPOSASE PROTEIN
AL646053_269781CAD17368.133791COG3335Transposase and inactivated derivativesISRSO5-TRANSPOSASE PROTEIN
AL646052_3659384CAD16890.133791COG3335Transposase and inactivated derivativesISRSO5-TRANSPOSASE PROTEIN
AL646052_683432CAD14167.133791COG3335Transposase and inactivated derivativesISRSO5-TRANSPOSASE PROTEIN
AL646052_127903CAD13638.133791COG3335Transposase and inactivated derivativesISRSO5-TRANSPOSASE PROTEIN
AL646053_564871CAD17604.133791COG3335Transposase and inactivated derivativesREMNANT OF ISRSO5 TRANSPOSASE PROTEIN
AL646052_117992CAD13631.133791COG3335Transposase and inactivated derivativesISRSO5-TRANSPOSASE PROTEIN
AL646052_2360185CAD15883.133791COG3335Transposase and inactivated derivativesISRSO5-TRANSPOSASE PROTEIN
AL646053_562296CAD17601.133791COG3335Transposase and inactivated derivativesREMNANT OF ISRSO5-TRANSPOSASE PROTEIN
AL646052_2780153CAD16280.126244COG3464Transposase and inactivated derivativesISRSO15-TRANSPOSASE PROTEIN
AL646053_1947872CAD18698.126244COG3464Transposase and inactivated derivativesISRSO15-TRANSPOSASE PROTEIN
AL646053_562934CAD17602.131456COG4584Transposase and inactivated derivativesISRSO6-TRANSPOSASE ORFA PROTEIN
AL646052_2531677CAD16040.131456COG4584Transposase and inactivated derivativesISRSO6-TRANSPOSASE ORFA PROTEIN
AL646052_275259CAD13775.131456COG4584Transposase and inactivated derivativesPROBABLE ISRSO6-TRANSPOSASE ORFA PROTEIN
AL646053_1196996CAD18103.131456COG4584Transposase and inactivated derivativesISRSO3-TRANSPOSASE ORFA PROTEIN
AL646052_57356CAD13580.132603COG4973Site-specific recombinase XerCPROBABLE SITE SPECIFIC INTEGRASE/RECOMBINASE PROTEIN
AL646052_2752033CAD16251.132603COG4974Site-specific recombinase XerDPROBABLE INTEGRASE/RECOMBINASE PROTEIN
AL646053_98795CAD17241.132603COG4974Site-specific recombinase XerDPROBABLE INTEGRASE/RECOMBINASE PROTEIN


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