| All COGs for pseudomonasaeruginosapao1 : L |
| Genes (#) | COG | COG description |
| 3 | COG0084 | Mg-dependent DNase |
| 2 | COG0187 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
| 2 | COG0188 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
| 2 | COG0210 | Superfamily I DNA and RNA helicases |
| 4 | COG0494 | NTP pyrophosphohydrolases including oxidative damage repair enzymes |
| 6 | COG0513 | Superfamily II DNA and RNA helicases |
| 2 | COG0587 | DNA polymerase III, alpha subunit |
| 3 | COG0708 | Exonuclease III |
| 5 | COG0776 | Bacterial nucleoid DNA-binding protein |
| Included Genes in pseudomonasaeruginosapao1 : L |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| AE004091_3995840 | AAG06952.1 | 3753 | COG0084 | Mg-dependent DNase | conserved hypothetical protein |
| AE004091_3218665 | AAG06254.1 | 3753 | COG0084 | Mg-dependent DNase | secretion protein MttC |
| AE004091_3318882 | AAG06347.1 | 3753 | COG0084 | Mg-dependent DNase | conserved hypothetical protein |
| AE004091_5576027 | AAG08352.1 | 4233 | COG0187 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit | topoisomerase IV subunit B |
| AE004091_4275 | AAG03394.1 | 4233 | COG0187 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit | DNA gyrase subunit B |
| AE004091_3556426 | AAG06556.1 | 1817 | COG0188 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit | DNA gyrase subunit A |
| AE004091_5572221 | AAG08349.1 | 1817 | COG0188 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit | topoisomerase IV subunit A |
| AE004091_5962715 | AAG08681.1 | 18279 | COG0210 | Superfamily I DNA and RNA helicases | ATP-dependent DNA helicase Rep |
| AE004091_6131087 | AAG08828.1 | 18279 | COG0210 | Superfamily I DNA and RNA helicases | DNA helicase II |
| AE004091_3882979 | AAG06858.1 | 12241 | COG0494 | NTP pyrophosphohydrolases including oxidative damage repair enzymes | hypothetical protein |
| AE004091_378096 | AAG03725.1 | 12241 | COG0494 | NTP pyrophosphohydrolases including oxidative damage repair enzymes | Nudix hydrolase YgdP |
| AE004091_5828903 | AAG08561.1 | 32357 | COG0494 | NTP pyrophosphohydrolases including oxidative damage repair enzymes | conserved hypothetical protein |
| AE004091_5580101 | AAG08356.1 | 32357 | COG0494 | NTP pyrophosphohydrolases including oxidative damage repair enzymes | adenosine diphosphate sugar pyrophosphatase |
| AE004091_4321433 | AAG07248.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | ATP-dependent RNA helicase RhlB |
| AE004091_3878032 | AAG06854.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | probable ATP-dependent RNA helicase |
| AE004091_3193885 | AAG06228.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | probable ATP-dependent RNA helicase |
| AE004091_4430598 | AAG07337.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | probable ATP-dependent RNA helicase |
| AE004091_513051 | AAG03844.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | RNA helicase DbpA |
| AE004091_477886 | AAG03817.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | probable ATP-dependent RNA helicase |
| AE004091_4075156 | AAG07028.1 | 10112 | COG0587 | DNA polymerase III, alpha subunit | DNA polymerase III, alpha chain |
| AE004091_727608 | AAG04058.1 | 10112 | COG0587 | DNA polymerase III, alpha subunit | probable DNA polymerase alpha chain |
| AE004091_2876554 | AAG05933.1 | 33302 | COG0708 | Exonuclease III | exodeoxyribonuclease III |
| AE004091_4668489 | AAG07559.1 | 33302 | COG0708 | Exonuclease III | probable nuclease |
| AE004091_6002120 | AAG08717.1 | 33302 | COG0708 | Exonuclease III | catabolite repression control protein |
| AE004091_6017149 | AAG08733.1 | 34486 | COG0776 | Bacterial nucleoid DNA-binding protein | probable DNA-binding protein |
| AE004091_3099809 | AAG06126.1 | 34486 | COG0776 | Bacterial nucleoid DNA-binding protein | integration host factor, alpha subunit |
| AE004091_4418302 | AAG07327.1 | 34486 | COG0776 | Bacterial nucleoid DNA-binding protein | probable DNA binding protein |
| AE004091_3547688 | AAG06549.1 | 34486 | COG0776 | Bacterial nucleoid DNA-binding protein | integration host factor beta subunit |
| AE004091_1958759 | AAG05193.1 | 34486 | COG0776 | Bacterial nucleoid DNA-binding protein | DNA-binding protein HU |
| Excluded Genes in pseudomonasaeruginosapao1 : L |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| AE004091_4190615 | AAG07125.1 | 32603 | COG0582 | Integrase | integrase/recombinase XerD |
| AE004091_5944326 | AAG08665.1 | 32603 | COG0582 | Integrase | site-specific recombinase Sss |
| AE004091_2118926 | AAG05326.1 | 33272 | COG2801 | Transposase and inactivated derivatives | conserved hypothetical protein |
| AE004091_1061207 | AAG04367.1 | 33272 | COG2801 | Transposase and inactivated derivatives | conserved hypothetical protein |
| AE004091_288384 | AAG03646.1 | 33272 | COG2801 | Transposase and inactivated derivatives | hypothetical protein |
| AE004091_2118585 | AAG05325.1 | 33231 | COG2963 | Transposase and inactivated derivatives | conserved hypothetical protein |
| AE004091_1062061 | AAG04368.1 | 33231 | COG2963 | Transposase and inactivated derivatives | conserved hypothetical protein |
| AE004091_1065138 | AAG04372.1 | 33231 | COG2963 | Transposase and inactivated derivatives | conserved hypothetical protein |
| AE004091_5382795 | AAG08183.1 | 33000 | COG3547 | Transposase and inactivated derivatives | probable transposase |
| AE004091_4473622 | AAG07380.1 | 33000 | COG3547 | Transposase and inactivated derivatives | probable transposase |
| AE004091_3842273 | AAG06822.1 | 33000 | COG3547 | Transposase and inactivated derivatives | probable transposase |
| AE004091_3043749 | AAG06078.1 | 33000 | COG3547 | Transposase and inactivated derivatives | probable transposase |
| AE004091_2556948 | AAG05707.1 | 33000 | COG3547 | Transposase and inactivated derivatives | probable transposase |
| AE004091_500104 | AAG03834.1 | 33000 | COG3547 | Transposase and inactivated derivatives | probable transposase |
