| All COGs for mycobacteriumtuberculosiscdc1551 : L |
| Genes (#) | COG | COG description |
| 2 | COG0210 | Superfamily I DNA and RNA helicases |
| 4 | COG0266 | Formamidopyrimidine-DNA glycosylase |
| 2 | COG0389 | Nucleotidyltransferase/DNA polymerase involved in DNA repair |
| 2 | COG0513 | Superfamily II DNA and RNA helicases |
| 2 | COG0515 | Serine/threonine protein kinase |
| 2 | COG0587 | DNA polymerase III, alpha subunit |
| 2 | COG3285 | Predicted eukaryotic-type DNA primase |
| Included Genes in mycobacteriumtuberculosiscdc1551 : L |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| AE000516_3564013 | AAK47634.1 | 18279 | COG0210 | Superfamily I DNA and RNA helicases | ATP-dependent DNA helicase |
| AE000516_1058273 | AAK45224.1 | 18279 | COG0210 | Superfamily I DNA and RNA helicases | ATP-dependent helicase PcrA |
| AE000516_3232921 | AAK47321.1 | 31879 | COG0266 | Formamidopyrimidine-DNA glycosylase | formamidopyrimidine-DNA glycosylase |
| AE000516_2763704 | AAK46839.1 | 31879 | COG0266 | Formamidopyrimidine-DNA glycosylase | formamidopyrimidine-DNA glycosylase |
| AE000516_3676155 | AAK47739.1 | 31879 | COG0266 | Formamidopyrimidine-DNA glycosylase | endonuclease VIII |
| AE000516_1053754 | AAK45218.1 | 31879 | COG0266 | Formamidopyrimidine-DNA glycosylase | formamidopyrimidine-DNA-glycosylase |
| AE000516_3412427 | AAK47474.1 | 19914 | COG0389 | Nucleotidyltransferase/DNA polymerase involved in DNA repair | DNA-damage-inducible protein P, putative |
| AE000516_1739943 | AAK45855.1 | 19914 | COG0389 | Nucleotidyltransferase/DNA polymerase involved in DNA repair | DNA-damage-inducible protein P, putative |
| AE000516_3582701 | AAK47649.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | ATP-dependent RNA helicase DeaD |
| AE000516_1399457 | AAK45550.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | ATP-dependent RNA helicase DeaD |
| AE000516_1037933 | AAK45205.1 | 16517 | COG0515 | Serine/threonine protein kinase | serine/threonine protein kinase |
| AE000516_1413446 | AAK45563.1 | 16517 | COG0515 | Serine/threonine protein kinase | serine/threonine protein kinase |
| AE000516_3773733 | AAK47817.1 | 10112 | COG0587 | DNA polymerase III, alpha subunit | DNA polymerase III, alpha subunit, putative |
| AE000516_1747847 | AAK45865.1 | 10112 | COG0587 | DNA polymerase III, alpha subunit | DNA polymerase III, alpha subunit |
| AE000516_4172992 | AAK48202.1 | 16132 | COG3285 | Predicted eukaryotic-type DNA primase | conserved hypothetical protein |
| AE000516_323452 | AAK44501.1 | 16132 | COG3285 | Predicted eukaryotic-type DNA primase | conserved hypothetical protein |
| Excluded Genes in mycobacteriumtuberculosiscdc1551 : L |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| AE000516_3197547 | AAK47288.1 | 32603 | COG0582 | Integrase | phage integrase family protein |
| AE000516_2966694 | AAK47038.1 | 32603 | COG0582 | Integrase | phage integrase family protein |
| AE000516_3094920 | AAK47180.1 | 19933 | COG0675 | Transposase and inactivated derivatives | IS1602, transposase |
| AE000516_3188319 | AAK47278.1 | 19933 | COG0675 | Transposase and inactivated derivatives | IS1539, transposase |
| AE000516_3328104 | AAK47383.1 | 19933 | COG0675 | Transposase and inactivated derivatives | IS1538, transposase |
| AE000516_4293885 | AAK48302.1 | 19933 | COG0675 | Transposase and inactivated derivatives | IS1537, transposase |
| AE000516_1027698 | AAK45196.1 | 19933 | COG0675 | Transposase and inactivated derivatives | IS1535, transposase |
| AE000516_3284110 | AAK47343.1 | 33411 | COG1484 | DNA replication protein | IS1533, OrfB |
| AE000516_4069224 | AAK48099.1 | 33411 | COG1484 | DNA replication protein | IS1534, istB protein |
| AE000516_3096299 | AAK47181.1 | 15831 | COG2452 | Predicted site-specific integrase-resolvase | IS1602, resolvase |
| AE000516_3189698 | AAK47279.1 | 15831 | COG2452 | Predicted site-specific integrase-resolvase | IS1539, resolvase |
| AE000516_3329483 | AAK47384.1 | 15831 | COG2452 | Predicted site-specific integrase-resolvase | IS1538, resolvase |
| AE000516_4295108 | AAK48303.1 | 15831 | COG2452 | Predicted site-specific integrase-resolvase | IS1537, resolvase |
| AE000516_1027117 | AAK45195.1 | 15831 | COG2452 | Predicted site-specific integrase-resolvase | IS1535, resolvase |
| AE000516_702854 | AAK44857.1 | 15831 | COG2452 | Predicted site-specific integrase-resolvase | IS1536, resolvase |
| AE000516_3372135 | AAK47429.1 | 33272 | COG2801 | Transposase and inactivated derivatives | IS6110, transposase |
| AE000516_3115354 | AAK47204.1 | 33272 | COG2801 | Transposase and inactivated derivatives | IS6110, transposase |
| AE000516_1985567 | AAK46076.1 | 33272 | COG2801 | Transposase and inactivated derivatives | IS6110, transposase |
| AE000516_483432 | AAK44637.1 | 33272 | COG2801 | Transposase and inactivated derivatives | IS6110, transposase |
| AE000516_3116289 | AAK47205.1 | 33231 | COG2963 | Transposase and inactivated derivatives | IS6110, hypothetical protein |
| AE000516_3371758 | AAK47428.1 | 33231 | COG2963 | Transposase and inactivated derivatives | IS6110, hypothetical protein |
| AE000516_484367 | AAK44638.1 | 33231 | COG2963 | Transposase and inactivated derivatives | IS6110, hypothetical protein |
| AE000516_1986502 | AAK46077.1 | 33231 | COG2963 | Transposase and inactivated derivatives | IS6110, hypothetical protein |
| AE000516_3791660 | AAK47831.1 | 10620 | COG3039 | Transposase and inactivated derivatives, IS5 family | IS1560, transposase |
| AE000516_1158962 | AAK45315.1 | 10620 | COG3039 | Transposase and inactivated derivatives, IS5 family | IS1560' protein |
| AE000516_3835243 | AAK47877.1 | 34374 | COG3328 | Transposase and inactivated derivatives | IS1535, transposase |
| AE000516_2824043 | AAK46892.1 | 34374 | COG3328 | Transposase and inactivated derivatives | IS1081, transposase |
| AE000516_4070760 | AAK48101.1 | 34374 | COG3328 | Transposase and inactivated derivatives | IS1553, transposase |
| AE000516_1340845 | AAK45494.1 | 34374 | COG3328 | Transposase and inactivated derivatives | IS1081, transposase |
| AE000516_3377111 | AAK47437.1 | 34374 | COG3328 | Transposase and inactivated derivatives | IS1081, transposase |
| AE000516_3477184 | AAK47537.1 | 34374 | COG3328 | Transposase and inactivated derivatives | IS1081, transposase |
| AE000516_1169406 | AAK45328.1 | 34374 | COG3328 | Transposase and inactivated derivatives | IS1081, transposase |
| AE000516_1025510 | AAK45194.1 | 34374 | COG3328 | Transposase and inactivated derivatives | IS1554, transposase |
| AE000516_4245315 | AAK48271.1 | 18928 | COG3464 | Transposase and inactivated derivatives | IS1557, transposase |
| AE000516_1467712 | AAK45615.1 | 18928 | COG3464 | Transposase and inactivated derivatives | IS1557, transposase |
| AE000516_890240 | AAK45060.1 | 33849 | COG3547 | Transposase and inactivated derivatives | IS1547, transposase |
| AE000516_2717625 | AAK46794.1 | 5251 | COG3547 | Transposase and inactivated derivatives | IS1558, transposase |
| AE000516_2436615 | AAK46518.1 | 5251 | COG3547 | Transposase and inactivated derivatives | IS1558', transposase |
| AE000516_3876079 | AAK47921.1 | 16546 | COG3747 | Phage terminase, small subunit | conserved hypothetical protein |
| AE000516_2970713 | AAK47043.1 | 16546 | COG3747 | Phage terminase, small subunit | hypothetical protein |
| AE000516_1917004 | AAK46009.1 | 32603 | COG4974 | Site-specific recombinase XerD | integrase/recombinase XerD |
