All COGs for escherichiacolio157h7_edl933 : L
Genes (#)COGCOG description
3COG0084Mg-dependent DNase
2COG0187Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
2COG0188Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
2COG0210Superfamily I DNA and RNA helicases
2COG0266Formamidopyrimidine-DNA glycosylase
9COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymes
5COG0513Superfamily II DNA and RNA helicases
4COG0776Bacterial nucleoid DNA-binding protein
2COG1061DNA or RNA helicases of superfamily II
2COG1112Superfamily I DNA and RNA helicases and helicase subunits
2COG1199Rad3-related DNA helicases
3COG2003DNA repair proteins

Included Genes in escherichiacolio157h7_edl933 : L
gene_idprotein_idgene_familycogcog_descriptionproduct
AE005174_1600958AAG55846.13753COG0084Mg-dependent DNaseorf, hypothetical protein
AE005174_4888613AAG59035.13753COG0084Mg-dependent DNase
AE005174_5501663AAG59559.13753COG0084Mg-dependent DNase
AE005174_3986911AAG58169.14233COG0187Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunitDNA topoisomerase IV subunit B
AE005174_4732919AAG58896.14233COG0187Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunitDNA gyrase subunit B, type II topoisomerase, ATPase activity
AE005174_3133830AAG57360.11817COG0188Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunitDNA gyrase, subunit A, type II topoisomerase
AE005174_3971378AAG58155.11817COG0188Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunitDNA topoisomerase IV subunit A
AE005174_4860402AAG59006.118279COG0210Superfamily I DNA and RNA helicasesDNA-dependent ATPase I and helicase II
AE005174_4823066AAG58972.118279COG0210Superfamily I DNA and RNA helicasesrep helicase, a single-stranded DNA dependent ATPase
AE005174_824235AAG55037.131879COG0266Formamidopyrimidine-DNA glycosylaseendonuclease VIII and DNA N-glycosylase with an AP lyase activity
AE005174_4623183AAG58779.131879COG0266Formamidopyrimidine-DNA glycosylaseformamidopyrimidine DNA glycosylase
AE005174_115650AAG54403.112241COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymes7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP, causes AT-GC transversions
AE005174_3758143AAG57941.112241COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesputative invasion protein
AE005174_2516203AAG56745.112241COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesorf, hypothetical protein
AE005174_3165021AAG57382.112241COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesorf, hypothetical protein
AE005174_2871327AAG57111.117065COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesGDP-mannose mannosyl hydrolase
AE005174_2848476AAG57092.117065COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesGDP-mannose mannosylhydrolase
AE005174_3990688AAG58173.132357COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesorf, hypothetical protein
AE005174_4305003AAG58497.132357COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesorf, hypothetical protein
AE005174_3368859AAG57576.132357COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesorf, hypothetical protein
AE005174_954892AAG55168.133241COG0513Superfamily II DNA and RNA helicasesputative ATP-dependent RNA helicase
AE005174_2166809AAG56454.133241COG0513Superfamily II DNA and RNA helicasesATP-dependent RNA helicase
AE005174_3503106AAG57692.133241COG0513Superfamily II DNA and RNA helicasesATP-dependent RNA helicase
AE005174_4826754AAG58974.133241COG0513Superfamily II DNA and RNA helicasesputative ATP-dependent RNA helicase
AE005174_4115682AAG58298.133241COG0513Superfamily II DNA and RNA helicasesinducible ATP-independent RNA helicase
AE005174_527505AAG54790.134486COG0776Bacterial nucleoid DNA-binding proteinDNA-binding protein HU-beta, NS1 (HU-1)
AE005174_2470167AAG56699.134486COG0776Bacterial nucleoid DNA-binding proteinintegration host factor (IHF), alpha subunit; site specific recombination
AE005174_1182694AAG55397.134486COG0776Bacterial nucleoid DNA-binding proteinintegration host factor (IHF), beta subunit; site-specific recombination
AE005174_5077850AAG59197.134486COG0776Bacterial nucleoid DNA-binding proteinDNA-binding protein HU-alpha (HU-2)
AE005174_1066952AAG55274.121930COG1061DNA or RNA helicases of superfamily IIputative helicase
AE005174_1462559AAG55683.121930COG1061DNA or RNA helicases of superfamily IIputative helicase
AE005174_1123332AAG55347.110439COG1112Superfamily I DNA and RNA helicases and helicase subunits
AE005174_1518939AAG55757.110439COG1112Superfamily I DNA and RNA helicases and helicase subunits
AE005174_959163AAG55171.16067COG1199Rad3-related DNA helicasesputative ATP-dependent helicase
AE005174_2568356AAG56797.16067COG1199Rad3-related DNA helicasesputative enzyme
AE005174_1141379AAG55362.15013COG2003DNA repair proteinsputative DNA repair protein, RADC family
AE005174_1536985AAG55772.15013COG2003DNA repair proteinsputative DNA repair protein, RADC family
AE005174_4624731AAG58782.15013COG2003DNA repair proteinsDNA repair protein

Excluded Genes in escherichiacolio157h7_edl933 : L
gene_idprotein_idgene_familycogcog_descriptionproduct
AE005174_2151024AAG56430.133524COG0270Site-specific DNA methylaseputative DNA modification methyltransferase encoded within prophage CP-933R
AE005174_2730657AAG56975.133524COG0270Site-specific DNA methylaseDNA cytosine methylase
AE005174_371783AAG54651.114355COG0582Integrase
AE005174_5426946AAG59495.114355COG0582Integraserecombinase involved in phase variation; regulator for fimA
AE005174_5425866AAG59494.114355COG0582Integraserecombinase involved in phase variation; regulator for fimA
AE005174_310756AAG54584.126664COG0582Integraseintegrase protein for prophage CP-933I
AE005174_1454402AAG55674.126664COG0582Integraseputative P4-family integrase
AE005174_5387443AAG59476.126664COG0582Integrasepartial putative integrase
AE005174_3263062AAG57476.126664COG0582Integraseputative prophage integrase
AE005174_3919543AAG58098.126664COG0582Integraseputative pathogenicity island integrase
AE005174_4650040AAG58803.126664COG0582Integraseputative integrase for prophage 933L and the LEE pathogenicity island
AE005174_1058795AAG55265.126664COG0582Integraseputative P4-family integrase
AE005174_3844302AAG58022.132603COG0582Integrasesite-specific recombinase
AE005174_4858706AAG59004.132603COG0582Integrasesite-specific recombinase, acts on cer sequence of ColE1, effects chromosome segregation at cell division
AE005174_1849487AAG56112.15052COG0582Integraseputative integrase for prophage CP-933O
AE005174_1626722AAG55869.15052COG0582Integrasepartial integrase for prophage CP-933N
AE005174_892845AAG55102.15052COG0582Integraseputative integrase encoded by prophage CP-933K; partial
AE005174_1702185AAG55963.15052COG0582Integraseputative integrase of prophage CP-933X
AE005174_1330857AAG55553.17846COG0582Integraseintegrase for bacteriophage BP-933W
AE005174_1878801AAG56154.17846COG0582Integraseputative integrase within CP-933O; partial
AE005174_2164458AAG56452.17846COG0582Integraseputative integrase for prophage CP-933R
AE005174_2329683AAG56568.17846COG0582Integraseintegrase fragment, cryptic prophage CP-933P
AE005174_3013726AAG57258.17846COG0582Integraseputative integrase for prophage CP-933V
AE005174_1250521AAG55457.19499COG0582Integraseputative integrase for cryptic prophage CP-933M
AE005174_2787324AAG57039.19499COG0582Integraseputative integrase for prophage CP-933U
AE005174_3315871AAG57523.133375COG0675Transposase and inactivated derivativesputative virulence protein
AE005174_5312194AAG59403.133375COG0675Transposase and inactivated derivativesputative virulence protein
AE005174_1260216AAG55471.17240COG1484DNA replication proteinputative DNA replication factor encoded within cryptic prophage CP-933M
AE005174_5488588AAG59544.17240COG1484DNA replication proteinchromosome replication; initiation and chain elongation
AE005174_2155158AAG56437.17240COG1484DNA replication proteinputative DNA replication factor encoded by prophage CP-933R
AE005174_1511474AAG55747.132761COG1662Transposase and inactivated derivatives, IS1 familyIS1 protein InsB
AE005174_1062497AAG55268.132761COG1662Transposase and inactivated derivatives, IS1 familyunknown in IS1N
AE005174_1115867AAG55337.132761COG1662Transposase and inactivated derivatives, IS1 familyIS1 protein InsB
AE005174_1458104AAG55677.132761COG1662Transposase and inactivated derivatives, IS1 familyunknown in IS1N
AE005174_306856AAG54580.133680COG1961Site-specific recombinases, DNA invertase Pin homologsDNA invertase from prophage CP-933H
AE005174_5383209AAG59471.133680COG1961Site-specific recombinases, DNA invertase Pin homologsputative resolvase
AE005174_3270705AAG57485.133680COG1961Site-specific recombinases, DNA invertase Pin homologsputative resolvase
AE005174_309886AAG54583.132762COG2801Transposase and inactivated derivativesunknown protein encoded by IS2
AE005174_1670022AAG55925.132762COG2801Transposase and inactivated derivativesputative IS encoded protein
AE005174_1871076AAG56143.133272COG2801Transposase and inactivated derivativesputative transposase within CP-933O
AE005174_1776912AAG56045.133272COG2801Transposase and inactivated derivativestransposase for IS629
AE005174_1525140AAG55762.133272COG2801Transposase and inactivated derivativespartial transposase
AE005174_1142979AAG55366.133272COG2801Transposase and inactivated derivativesputative transposase
AE005174_1129534AAG55352.133272COG2801Transposase and inactivated derivativespartial transposase
AE005174_1468539AAG55688.133272COG2801Transposase and inactivated derivativesunknown in IS600
AE005174_1538585AAG55774.133272COG2801Transposase and inactivated derivativestransposase for IS629
AE005174_1072932AAG55279.133272COG2801Transposase and inactivated derivativesunknown in IS600
AE005174_1120106AAG55343.133272COG2801Transposase and inactivated derivativesputative transposase
AE005174_1515713AAG55753.133272COG2801Transposase and inactivated derivativesputative transposase
AE005174_1755358AAG56023.133272COG2801Transposase and inactivated derivativesputative transposase for IS629
AE005174_1896974AAG56181.133272COG2801Transposase and inactivated derivativesputative transposase encoded within prophage CP-933O
AE005174_2961047AAG57189.133272COG2801Transposase and inactivated derivativesputative transposase for IS629
AE005174_4651859AAG58805.133272COG2801Transposase and inactivated derivativesputative transposase
AE005174_5379890AAG59466.133272COG2801Transposase and inactivated derivativesputative transposase
AE005174_4101040AAG58280.133272COG2801Transposase and inactivated derivativesputative transposase
AE005174_2761891AAG57010.133272COG2801Transposase and inactivated derivativesputative transposase encoded within prophage CP-933U
AE005174_2142586AAG56421.133272COG2801Transposase and inactivated derivativesputative IS629 transposase within prophage CP-933R
AE005174_2177309AAG56463.133272COG2801Transposase and inactivated derivativesputative transposase for IS629
AE005174_2529764AAG56758.133272COG2801Transposase and inactivated derivativesputative transposase
AE005174_2678808AAG56913.133272COG2801Transposase and inactivated derivativesIS629 transposase encoded within prophage CP-933T
AE005174_2818561AAG57060.133272COG2801Transposase and inactivated derivativesIS629 transposase
AE005174_3551083AAG57740.133272COG2801Transposase and inactivated derivativespartial putative transposase
AE005174_3550845AAG57739.133272COG2801Transposase and inactivated derivativespartial putative transposase
AE005174_3936686AAG58118.133272COG2801Transposase and inactivated derivativesIS629 transposase
AE005174_1072481AAG55278.133322COG2826Transposase and inactivated derivatives, IS30 familypartial putative transposase
AE005174_1468088AAG55687.133322COG2826Transposase and inactivated derivatives, IS30 familypartial putative transposase
AE005174_3557853AAG57749.133322COG2826Transposase and inactivated derivatives, IS30 familyIS30 transposase
AE005174_2687186AAG56925.133322COG2826Transposase and inactivated derivatives, IS30 familyIS30 transposase encoded within prophage CP-933T
AE005174_1748654AAG56016.132792COG2963Transposase and inactivated derivativesunknown protein encoded by ISEc8 in prophage CP-933X
AE005174_1525442AAG55763.132792COG2963Transposase and inactivated derivativesunknown in putative ISEc8
AE005174_1089346AAG55304.132792COG2963Transposase and inactivated derivativesunknown in ISEc8
AE005174_345429AAG54623.132792COG2963Transposase and inactivated derivativesunknown protein encoded in ISEc8
AE005174_1129836AAG55353.132792COG2963Transposase and inactivated derivativesunknown in putative ISEc8
AE005174_1484953AAG55713.132792COG2963Transposase and inactivated derivativesunknown in ISEc8
AE005174_2811937AAG57055.132792COG2963Transposase and inactivated derivativesunknown protein encoded by ISEc8
AE005174_3921799AAG58100.132792COG2963Transposase and inactivated derivativesunknown protein encoded by ISEc8
AE005174_4655040AAG58811.132792COG2963Transposase and inactivated derivativesunknown protein encoded by ISEc8 within prophage CP-933L
AE005174_1777799AAG56046.133231COG2963Transposase and inactivated derivativesunknown in IS629
AE005174_1516600AAG55754.133231COG2963Transposase and inactivated derivativesunknown in IS
AE005174_1083803AAG55295.133231COG2963Transposase and inactivated derivativesunknown in IS
AE005174_1143866AAG55367.133231COG2963Transposase and inactivated derivativesunknown in IS
AE005174_1479410AAG55704.133231COG2963Transposase and inactivated derivativesunknown in IS
AE005174_1539472AAG55775.133231COG2963Transposase and inactivated derivativesunknown protein encoded by IS629
AE005174_1120993AAG55344.133231COG2963Transposase and inactivated derivativesunknown in IS
AE005174_1754792AAG56022.133231COG2963Transposase and inactivated derivativesunknown in IS629
AE005174_1871963AAG56144.133231COG2963Transposase and inactivated derivativesputative IS encoded protein within CP-933O
AE005174_1896408AAG56180.133231COG2963Transposase and inactivated derivativesputative transposase encoded within prophage CP-933O
AE005174_2142019AAG56420.133231COG2963Transposase and inactivated derivativesorf; hypothetical protein in IS629 within prophage CP-933R
AE005174_2176743AAG56462.133231COG2963Transposase and inactivated derivativesunknown protein in IS629
AE005174_2761543AAG57009.133231COG2963Transposase and inactivated derivativesunknown in IS629 encoded within prophage CP-933U
AE005174_5379324AAG59465.133231COG2963Transposase and inactivated derivativesorf; hypothetical protein in IS
AE005174_4100474AAG58279.133231COG2963Transposase and inactivated derivativesorf; hypothetical protein in IS629
AE005174_2529438AAG56757.133231COG2963Transposase and inactivated derivativesunknown protein encoded within IS629
AE005174_2679497AAG56914.133231COG2963Transposase and inactivated derivativesunknown protein of IS629 encoded within prophage CP-933T
AE005174_2818238AAG57059.133231COG2963Transposase and inactivated derivativesunknown protein encoded by IS629
AE005174_2961934AAG57190.133231COG2963Transposase and inactivated derivativesunknown protein in IS629
AE005174_3550278AAG57737.133231COG2963Transposase and inactivated derivativesputative transposase
AE005174_3937573AAG58119.133231COG2963Transposase and inactivated derivativesunknown protein in IS629
AE005174_4651320AAG58804.133231COG2963Transposase and inactivated derivativesunknown protein encoded by IS911 within prophage CP-933L
AE005174_1671207AAG55927.110880COG3328Transposase and inactivated derivativesputative IS encoded protein
AE005174_1877450AAG56152.134374COG3328Transposase and inactivated derivativesputative transposase within CP-933O; partial
AE005174_1874667AAG56148.134374COG3328Transposase and inactivated derivativesputative transposase within CP-933O
AE005174_1487373AAG55716.132629COG3436Transposase and inactivated derivativesunknown in ISEc8
AE005174_1485756AAG55715.132629COG3436Transposase and inactivated derivativesunknown in ISEc8
AE005174_1484148AAG55712.132629COG3436Transposase and inactivated derivativesunknown in ISEc8
AE005174_1091766AAG55307.132629COG3436Transposase and inactivated derivativesunknown in ISEc8
AE005174_1090149AAG55306.132629COG3436Transposase and inactivated derivativesunknown in ISEc8
AE005174_1088541AAG55303.132629COG3436Transposase and inactivated derivativesunknown in ISEc8
AE005174_1465700AAG55685.132629COG3436Transposase and inactivated derivativesunknown protein encoded in ISEc8
AE005174_346224AAG54625.132629COG3436Transposase and inactivated derivativesunknown protein encoded in ISEc8
AE005174_1070093AAG55276.132629COG3436Transposase and inactivated derivativesunknown protein encoded in ISEc8
AE005174_1749458AAG56018.132629COG3436Transposase and inactivated derivativesunknown protein encoded by ISEc8 in prophage CP-933X
AE005174_1875211AAG56149.132629COG3436Transposase and inactivated derivativesputative IS encoded protein within CP-933O
AE005174_2812732AAG57057.132629COG3436Transposase and inactivated derivativesunknown protein encoded by ISEc8
AE005174_3938487AAG58121.132629COG3436Transposase and inactivated derivativesunknown protein encoded by ISEc8
AE005174_1907372AAG56196.132629COG3436Transposase and inactivated derivativesputative IS encoded protein encoded within prophage CP-933O
AE005174_3922837AAG58102.132629COG3436Transposase and inactivated derivativesunknown protein encoded by ISEc8
AE005174_3920925AAG58099.132629COG3436Transposase and inactivated derivativesunknown protein encoded by ISEc8
AE005174_3940811AAG58123.132629COG3436Transposase and inactivated derivativesunknown protein encoded by ISEc8
AE005174_4655835AAG58813.132629COG3436Transposase and inactivated derivativesunknown protein encoded by ISEc8 within prophage CP-933L
AE005174_1876694AAG56151.132689COG3436Transposase and inactivated derivativesputative IS encoded protein within CP-933O
AE005174_1870228AAG56142.132689COG3436Transposase and inactivated derivativesputative IS encoded proteinen coded by prophage CP-933O
AE005174_1488312AAG55717.132689COG3436Transposase and inactivated derivativesunknown in ISEc8
AE005174_1089768AAG55305.132689COG3436Transposase and inactivated derivativesunknown in ISEc8
AE005174_1071681AAG55277.132689COG3436Transposase and inactivated derivativesunknown protein encoded in ISEc8
AE005174_345827AAG54624.132689COG3436Transposase and inactivated derivativesunknown protein encoded in ISEc8
AE005174_1467288AAG55686.132689COG3436Transposase and inactivated derivativesunknown protein encoded in ISEc8
AE005174_1092705AAG55308.132689COG3436Transposase and inactivated derivativesunknown in ISEc8
AE005174_1485375AAG55714.132689COG3436Transposase and inactivated derivativesunknown in ISEc8
AE005174_4655438AAG58812.132689COG3436Transposase and inactivated derivativesunknown protein encoded by ISEc8 within prophage CP-933L
AE005174_1906762AAG56195.132689COG3436Transposase and inactivated derivativesputative IS encoded protein encoded within prophage CP-933O
AE005174_2812335AAG57056.132689COG3436Transposase and inactivated derivativesunknown protein encoded by ISEc8
AE005174_3938090AAG58120.132689COG3436Transposase and inactivated derivativesunknown protein encoded by ISEc8
AE005174_3922470AAG58101.132689COG3436Transposase and inactivated derivativesunknown protein encoded by ISEc8
AE005174_3940248AAG58122.132689COG3436Transposase and inactivated derivativesunknown protein encoded by ISEc8


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