All COGs for escherichiacoli_k12_mg1655 : L
Genes (#)COGCOG description
1COG0084Mg-dependent DNase
2COG0187Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
2COG0188Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
2COG0210Superfamily I DNA and RNA helicases
2COG0266Formamidopyrimidine-DNA glycosylase
7COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymes
5COG0513Superfamily II DNA and RNA helicases
4COG0776Bacterial nucleoid DNA-binding protein
2COG1199Rad3-related DNA helicases
4COG2003DNA repair proteins

Included Genes in escherichiacoli_k12_mg1655 : L
gene_idprotein_idgene_familycogcog_descriptionproduct
U00096_1156000AAC74184.13753COG0084Mg-dependent DNaseorf, hypothetical protein
U00096_3875333AAC76722.14233COG0187Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunitDNA gyrase subunit B, type II topoisomerase, ATPase activity
U00096_3171520AAC76066.14233COG0187Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunitDNA topoisomerase IV subunit B
U00096_2334813AAC75291.11817COG0188Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunitDNA gyrase, subunit A, type II topoisomerase
U00096_3161731AAC76055.11817COG0188Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunitDNA topoisomerase IV subunit A
U00096_3958292AAC76783.118279COG0210Superfamily I DNA and RNA helicasesrep helicase, a single-stranded DNA dependent ATPase
U00096_3995596AAC76816.118279COG0210Superfamily I DNA and RNA helicasesDNA-dependent ATPase I and helicase II
U00096_3807970AAC76659.131879COG0266Formamidopyrimidine-DNA glycosylaseformamidopyrimidine DNA glycosylase
U00096_745158AAC73808.131879COG0266Formamidopyrimidine-DNA glycosylaseendonuclease VIII and DNA N-glycosylase with an AP lyase activity
U00096_2966469AAC75869.112241COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesputative invasion protein
U00096_2362574AAC75311.112241COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesorf, hypothetical protein
U00096_1839514AAC74829.112241COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesorf, hypothetical protein
U00096_111044AAC73210.112241COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymes7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP, causes AT-GC transversions
U00096_3523227AAC76422.132357COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesorf, hypothetical protein
U00096_3175297AAC76070.132357COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesorf, hypothetical protein
U00096_2580923AAC75520.132357COG0494NTP pyrophosphohydrolases including oxidative damage repair enzymesorf, hypothetical protein
U00096_3961980AAC76785.133241COG0513Superfamily II DNA and RNA helicasesputative ATP-dependent RNA helicase
U00096_3303612AAC76196.133241COG0513Superfamily II DNA and RNA helicasesinducible ATP-independent RNA helicase
U00096_2710916AAC75629.133241COG0513Superfamily II DNA and RNA helicasesATP-dependent RNA helicase
U00096_1407535AAC74425.133241COG0513Superfamily II DNA and RNA helicasesATP-dependent RNA helicase
U00096_830095AAC73884.133241COG0513Superfamily II DNA and RNA helicasesputative ATP-dependent RNA helicase
U00096_460675AAC73543.134486COG0776Bacterial nucleoid DNA-binding proteinDNA-binding protein HU-beta, NS1 (HU-1)
U00096_963051AAC73998.134486COG0776Bacterial nucleoid DNA-binding proteinintegration host factor (IHF), beta subunit; site-specific recombination
U00096_4197859AAC76974.134486COG0776Bacterial nucleoid DNA-binding proteinDNA-binding protein HU-alpha (HU-2)
U00096_1793277AAC74782.134486COG0776Bacterial nucleoid DNA-binding proteinintegration host factor (IHF), alpha subunit; site specific recombination
U00096_832293AAC73886.16067COG1199Rad3-related DNA helicasesprobably ATP-dependent helicase
U00096_1889349AAC74878.16067COG1199Rad3-related DNA helicasesputative enzyme
U00096_2074330AAC75063.15013COG2003DNA repair proteinsputative DNA repair protein, RADC family
U00096_3809518AAC76662.15013COG2003DNA repair proteinsDNA repair protein
U00096_2774407AAC75692.15013COG2003DNA repair proteinsputative DNA repair protein
U00096_263480AAC73350.15013COG2003DNA repair proteinsputative DNA repair protein

Excluded Genes in escherichiacoli_k12_mg1655 : L
gene_idprotein_idgene_familycogcog_descriptionproduct
U00096_4538525AAC77268.114355COG0582Integraserecombinase involved in phase variation; regulator for fimA
U00096_4539605AAC77269.114355COG0582Integraserecombinase involved in phase variation; regulator for fimA
U00096_4494318AAC77227.126664COG0582Integraseprophage P4 integrase
U00096_2464565AAC75408.126664COG0582Integraseputative prophage Sf6-like integrase
U00096_2754180AAC75670.126664COG0582Integraseprophage CP4-57 integrase
U00096_2556791AAC75495.126664COG0582Integraseputative prophage integrase
U00096_3993900AAC76814.132603COG0582Integrasesite-specific recombinase, acts on cer sequence of ColE1, effects chromosome segregation at cell division
U00096_3036867AAC75932.132603COG0582Integrasesite-specific recombinase
U00096_1649536AAC74651.17846COG0582Integraseputative transposase
U00096_1410024AAC74427.17846COG0582Integraseputative transposase
U00096_4597807AAC77317.17240COG1484DNA replication proteinchromosome replication; initiation and chain elongation
U00096_1420007AAC74442.17240COG1484DNA replication proteinputative DNA replication factor
U00096_1976542AAC74963.132761COG1662Transposase and inactivated derivatives, IS1 familyIS1 protein InsB
U00096_278402AAC73367.132761COG1662Transposase and inactivated derivatives, IS1 familyIS1 protein InsB
U00096_289873AAC73377.132761COG1662Transposase and inactivated derivatives, IS1 familyIS1 protein InsB
U00096_3581308AAC76470.132761COG1662Transposase and inactivated derivatives, IS1 familyIS1 protein InsB
U00096_19811AAC73132.132761COG1662Transposase and inactivated derivatives, IS1 familyIS1 protein InsB
U00096_1049250AAC74073.132761COG1662Transposase and inactivated derivatives, IS1 familyIS1 protein InsB
U00096_1431108AAC74456.133680COG1961Site-specific recombinases, DNA invertase Pin homologsputative transposon resolvase
U00096_1631646AAC74618.133680COG1961Site-specific recombinases, DNA invertase Pin homologsorf, hypothetical protein
U00096_1208908AAC74242.133680COG1961Site-specific recombinases, DNA invertase Pin homologsinversion of adjacent DNA; at locus of e14 element
U00096_4496163AAC77229.132762COG2801Transposase and inactivated derivativesIS2 hypothetical protein
U00096_2994394AAC75899.132762COG2801Transposase and inactivated derivativesIS2 hypothetical protein
U00096_1648905AAC74650.132762COG2801Transposase and inactivated derivativesorf, hypothetical protein
U00096_3184526AAC76081.132762COG2801Transposase and inactivated derivativesIS2 hypothetical protein
U00096_2066974AAC75057.132762COG2801Transposase and inactivated derivativesIS2 hypothetical protein
U00096_1465945AAC74484.132762COG2801Transposase and inactivated derivativesIS2 hypothetical protein
U00096_2168554AAC75150.133272COG2801Transposase and inactivated derivativesIS3 putative transposase
U00096_390963AAC73475.133272COG2801Transposase and inactivated derivativesIS3 putative transposase
U00096_566361AAC73642.133272COG2801Transposase and inactivated derivativesIS3 putative transposase
U00096_3718827AAC76582.133272COG2801Transposase and inactivated derivativesIS150 putative transposase
U00096_4506526AAC77241.133272COG2801Transposase and inactivated derivativesputative transposase
U00096_271054AAC73360.133272COG2801Transposase and inactivated derivativesputative transposase
U00096_314811AAC73402.133272COG2801Transposase and inactivated derivativesIS3 putative transposase
U00096_1093498AAC74111.133272COG2801Transposase and inactivated derivativesIS3 putative transposase
U00096_269827AAC73359.133322COG2826Transposase and inactivated derivatives, IS30 familyIS30 transposase
U00096_4505034AAC77240.133322COG2826Transposase and inactivated derivatives, IS30 familyIS30 transposase
U00096_1467382AAC74486.133322COG2826Transposase and inactivated derivatives, IS30 familyIS30 transposase
U00096_380530AAC73463.132623COG2963Transposase and inactivated derivativesIS2 hypothetical protein
U00096_2995257AAC75900.132623COG2963Transposase and inactivated derivativesIS2 hypothetical protein
U00096_4495795AAC77228.132623COG2963Transposase and inactivated derivativesIS2 hypothetical protein
U00096_3184203AAC76080.132623COG2963Transposase and inactivated derivativesIS2 hypothetical protein
U00096_2067837AAC75058.132623COG2963Transposase and inactivated derivativesIS2 hypothetical protein
U00096_1466808AAC74485.132623COG2963Transposase and inactivated derivativesIS2 hypothetical protein
U00096_2168249AAC75149.133231COG2963Transposase and inactivated derivativesorf, hypothetical protein
U00096_269466AAC73358.133231COG2963Transposase and inactivated derivativesIS911 hypothetical protein, variant (IS911A)
U00096_4504729AAC77239.133231COG2963Transposase and inactivated derivativesIS911 hypothetical protein (IS911B)
U00096_314506AAC73401.133231COG2963Transposase and inactivated derivativesputative factor
U00096_1094361AAC74112.133231COG2963Transposase and inactivated derivativesorf, hypothetical protein
U00096_391826AAC73476.133231COG2963Transposase and inactivated derivativesputative factor
U00096_566056AAC73641.133231COG2963Transposase and inactivated derivativesorf, hypothetical protein
U00096_3363337AAC76250.131311COG3039Transposase and inactivated derivatives, IS5 familyIS5 transposase
U00096_3128193AAC76018.131311COG3039Transposase and inactivated derivatives, IS5 familyIS5 transposase
U00096_2064327AAC75055.131311COG3039Transposase and inactivated derivatives, IS5 familyIS5 transposase
U00096_1394100AAC74413.131311COG3039Transposase and inactivated derivatives, IS5 familyIS5 transposase
U00096_573960AAC73653.131311COG3039Transposase and inactivated derivatives, IS5 familyIS5 transposase
U00096_2099917AAC75091.131311COG3039Transposase and inactivated derivatives, IS5 familyIS5 transposase
U00096_3649812AAC76530.131311COG3039Transposase and inactivated derivatives, IS5 familyIS5 transposase
U00096_273325AAC73362.131311COG3039Transposase and inactivated derivatives, IS5 familyIS5 transposase
U00096_687220AAC73757.131311COG3039Transposase and inactivated derivatives, IS5 familyIS5 transposase
U00096_2287085AAC75252.131311COG3039Transposase and inactivated derivatives, IS5 familyIS5 transposase
U00096_1425770AAC74452.131311COG3039Transposase and inactivated derivatives, IS5 familyIS5 transposase
U00096_607288AAC73683.128137COG3385FOG: Transposase and inactivated derivativesIS186 hypothetical protein
U00096_15445AAC73127.128137COG3385FOG: Transposase and inactivated derivativesIS186 hypothetical protein
U00096_4499671AAC77234.132921COG3385FOG: Transposase and inactivated derivativesIS4 hypothetical protein

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