All COGs for caulobactercrescentuscb15 : L |
Genes (#) | COG | COG description |
2 | COG0187 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
2 | COG0188 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
3 | COG0350 | Methylated DNA-protein cysteine methyltransferase |
6 | COG0494 | NTP pyrophosphohydrolases including oxidative damage repair enzymes |
2 | COG0513 | Superfamily II DNA and RNA helicases |
2 | COG0587 | DNA polymerase III, alpha subunit |
2 | COG0708 | Exonuclease III |
4 | COG0776 | Bacterial nucleoid DNA-binding protein |
3 | COG2827 | Predicted endonuclease containing a URI domain |
Included Genes in caulobactercrescentuscb15 : L |
gene_id | protein_id | gene_family | cog | cog_description | product |
AE005673_166829 | AAK22147.1 | 4233 | COG0187 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit | DNA gyrase subunit B |
AE005673_2174469 | AAK23949.1 | 4233 | COG0187 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit | topoisomerase IV, subunit B |
AE005673_1729890 | AAK23545.1 | 1817 | COG0188 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit | topoisomerase IV, subunit A |
AE005673_1745328 | AAK23559.1 | 1817 | COG0188 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit | DNA gyrase subunit A |
AE005673_776741 | AAK22694.1 | 31928 | COG0350 | Methylated DNA-protein cysteine methyltransferase | ada regulatory protein, internal deletion |
AE005673_730199 | AAK22644.1 | 31928 | COG0350 | Methylated DNA-protein cysteine methyltransferase | methylated-DNA--protein-cysteinemethyltransferase |
AE005673_754920 | AAK22674.1 | 31928 | COG0350 | Methylated DNA-protein cysteine methyltransferase | methylated-DNA--protein-cysteinemethyltransferase |
AE005673_927872 | AAK22818.1 | 12241 | COG0494 | NTP pyrophosphohydrolases including oxidative damage repair enzymes | mutator mutT protein |
AE005673_1500188 | AAK23327.1 | 12241 | COG0494 | NTP pyrophosphohydrolases including oxidative damage repair enzymes | MutT/nudix family protein |
AE005673_3684018 | AAK25402.1 | 12241 | COG0494 | NTP pyrophosphohydrolases including oxidative damage repair enzymes | MutT/nudix family protein |
AE005673_1718538 | AAK23533.1 | 23832 | COG0494 | NTP pyrophosphohydrolases including oxidative damage repair enzymes | MutT/nudix family protein |
AE005673_3777835 | AAK25492.1 | 32357 | COG0494 | NTP pyrophosphohydrolases including oxidative damage repair enzymes | conserved hypothetical protein |
AE005673_3907634 | AAK25612.1 | 32357 | COG0494 | NTP pyrophosphohydrolases including oxidative damage repair enzymes | MutT/nudix family protein |
AE005673_929189 | AAK22820.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | ATP-dependent RNA helicase, DEAD/DEAH box family |
AE005673_2042181 | AAK23822.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | ATP-dependent RNA helicase, DEAD/DEAH box family |
AE005673_2122931 | AAK23901.1 | 10112 | COG0587 | DNA polymerase III, alpha subunit | DNA polymerase III, alpha subunit |
AE005673_3467008 | AAK25173.1 | 10112 | COG0587 | DNA polymerase III, alpha subunit | DNA polymerase III, alpha subunit, putative |
AE005673_3961387 | AAK25668.1 | 33302 | COG0708 | Exonuclease III | exodeoxyribonuclease III |
AE005673_2212365 | AAK23986.1 | 33302 | COG0708 | Exonuclease III | exodeoxyribonuclease III |
AE005673_1522587 | AAK23351.1 | 34486 | COG0776 | Bacterial nucleoid DNA-binding protein | integration host factor alpha-subunit |
AE005673_3843216 | AAK25548.1 | 34486 | COG0776 | Bacterial nucleoid DNA-binding protein | integration host factor beta subunit |
AE005673_2534155 | AAK24302.1 | 34486 | COG0776 | Bacterial nucleoid DNA-binding protein | DNA-binding protein HU |
AE005673_2154674 | AAK23934.1 | 34486 | COG0776 | Bacterial nucleoid DNA-binding protein | DNA-binding protein HU |
AE005673_1498101 | AAK23324.1 | 19328 | COG2827 | Predicted endonuclease containing a URI domain | conserved hypothetical protein |
AE005673_775716 | AAK22692.1 | 19328 | COG2827 | Predicted endonuclease containing a URI domain | conserved hypothetical protein |
AE005673_3761878 | AAK25480.1 | 19328 | COG2827 | Predicted endonuclease containing a URI domain | conserved hypothetical protein |
Excluded Genes in caulobactercrescentuscb15 : L |
gene_id | protein_id | gene_family | cog | cog_description | product |
AE005673_364395 | AAK22331.1 | 32603 | COG0582 | Integrase | integrase/recombinase XerC, putative |
AE005673_3225468 | AAK24968.1 | 32603 | COG0582 | Integrase | integrase/recombinase XerD |
AE005673_540134 | AAK22502.1 | 5535 | COG2801 | Transposase and inactivated derivatives | IS511, transposase OrfB |
AE005673_2905830 | AAK24655.1 | 5535 | COG2801 | Transposase and inactivated derivatives | IS511, transposase OrfB |
AE005673_2956536 | AAK24707.1 | 5535 | COG2801 | Transposase and inactivated derivatives | IS511, transposase OrfB |
AE005673_2492767 | AAK24261.1 | 5535 | COG2801 | Transposase and inactivated derivatives | IS511, transposase OrfB |
AE005673_2944180 | AAK24693.1 | 11348 | COG2963 | Transposase and inactivated derivatives | ISCc3, transposase OrfA |
AE005673_692769 | AAK22610.1 | 11348 | COG2963 | Transposase and inactivated derivatives | ISCc3, transposase OrfA |
AE005673_2874967 | AAK24624.1 | 11348 | COG2963 | Transposase and inactivated derivatives | ISCc3, transposase OrfA |
AE005673_1031377 | AAK22912.1 | 33454 | COG3293 | Transposase and inactivated derivatives | IS298, transposase OrfA |
AE005673_3578883 | AAK25295.1 | 33454 | COG3293 | Transposase and inactivated derivatives | IS298, transposase OrfA |
AE005673_3849884 | AAK25557.1 | 33454 | COG3293 | Transposase and inactivated derivatives | IS298, transposase OrfA |
AE005673_1436370 | AAK23272.1 | 33454 | COG3293 | Transposase and inactivated derivatives | IS298, transposase OrfA |
AE005673_3144476 | AAK24885.1 | 4172 | COG3547 | Transposase and inactivated derivatives | ISCc2, transposase |
AE005673_3037036 | AAK24780.1 | 4172 | COG3547 | Transposase and inactivated derivatives | ISCc2, transposase |
AE005673_709514 | AAK22627.1 | 4172 | COG3547 | Transposase and inactivated derivatives | ISCc2, transposase |
AE005673_1888945 | AAK23692.1 | 4172 | COG3547 | Transposase and inactivated derivatives | ISCc2, transposase |