All COGs for brucellamelitensis16m : L |
Genes (#) | COG | COG description |
2 | COG0187 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
2 | COG0188 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
2 | COG0350 | Methylated DNA-protein cysteine methyltransferase |
3 | COG0494 | NTP pyrophosphohydrolases including oxidative damage repair enzymes |
3 | COG0513 | Superfamily II DNA and RNA helicases |
2 | COG0587 | DNA polymerase III, alpha subunit |
2 | COG0708 | Exonuclease III |
3 | COG0776 | Bacterial nucleoid DNA-binding protein |
2 | COG1198 | Primosomal protein N' (replication factor Y) - superfamily II helicase |
Included Genes in brucellamelitensis16m : L |
gene_id | protein_id | gene_family | cog | cog_description | product |
AE008917_1860625 | AAL53004.1 | 4233 | COG0187 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit | DNA GYRASE SUBUNIT B |
AE008918_710669 | AAL53918.1 | 4233 | COG0187 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit | DNA GYRASE SUBUNIT B |
AE008917_915776 | AAL52065.1 | 1817 | COG0188 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit | DNA GYRASE SUBUNIT A |
AE008917_1242945 | AAL52381.1 | 1817 | COG0188 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit | TOPOISOMERASE IV SUBUNIT A |
AE008918_424622 | AAL53647.1 | 9166 | COG0350 | Methylated DNA-protein cysteine methyltransferase | ADA REGULATORY PROTEIN / O-6-METHYLGUANINE-DNA-ALKYLTRANSFERASE |
AE008917_1602007 | AAL52739.1 | 9166 | COG0350 | Methylated DNA-protein cysteine methyltransferase | ADA REGULATORY PROTEIN / O-6-METHYLGUANINE-DNA-ALKYLTRANSFERASE |
AE008917_123216 | AAL51308.1 | 12241 | COG0494 | NTP pyrophosphohydrolases including oxidative damage repair enzymes | MUTATOR MUTT PROTEIN (7,8-DIHYDRO-8-OXOGUANINE-TRIPHOSPHATASE) (8-OXO-DGTPASE) |
AE008917_1692263 | AAL52821.1 | 12241 | COG0494 | NTP pyrophosphohydrolases including oxidative damage repair enzymes | PHOSPHOHYDROLASE (MUTT/NUDIX FAMILY PROTEIN) |
AE008917_221343 | AAL51397.1 | 12241 | COG0494 | NTP pyrophosphohydrolases including oxidative damage repair enzymes | (Di)nucleoside polyphosphate hydrolase |
AE008917_1863162 | AAL53005.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | ATP-DEPENDENT RNA HELICASE DEAD |
AE008917_965830 | AAL52115.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | ATP-DEPENDENT RNA HELICASE RHLE |
AE008917_1072417 | AAL52216.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | ATP-DEPENDENT RNA HELICASE DEAD |
AE008917_1179807 | AAL52318.1 | 10112 | COG0587 | DNA polymerase III, alpha subunit | DNA POLYMERASE III, ALPHA CHAIN |
AE008917_1927275 | AAL53057.1 | 10112 | COG0587 | DNA polymerase III, alpha subunit | DNA POLYMERASE III, ALPHA CHAIN |
AE008917_66029 | AAL51250.1 | 33302 | COG0708 | Exonuclease III | EXODEOXYRIBONUCLEASE III |
AE008917_1140455 | AAL52274.1 | 33302 | COG0708 | Exonuclease III | EXODEOXYRIBONUCLEASE III |
AE008917_1832604 | AAL52975.1 | 34486 | COG0776 | Bacterial nucleoid DNA-binding protein | INTEGRATION HOST FACTOR BETA-SUBUNIT |
AE008917_907699 | AAL52058.1 | 34486 | COG0776 | Bacterial nucleoid DNA-binding protein | DNA-BINDING PROTEIN HU-ALPHA |
AE008917_1223660 | AAL52360.1 | 34486 | COG0776 | Bacterial nucleoid DNA-binding protein | INTEGRATION HOST FACTOR ALPHA-SUBUNIT |
AE008917_255457 | AAL51427.1 | 10608 | COG1198 | Primosomal protein N' (replication factor Y) - superfamily II helicase | PRIMOSOMAL PROTEIN N' |
AE008917_256304 | AAL51428.1 | 10608 | COG1198 | Primosomal protein N' (replication factor Y) - superfamily II helicase | PRIMOSOMAL PROTEIN N' |
Excluded Genes in brucellamelitensis16m : L |
gene_id | protein_id | gene_family | cog | cog_description | product |
AE008917_144647 | AAL51329.1 | 32603 | COG0582 | Integrase | INTEGRASE |
AE008918_242758 | AAL53469.1 | 33272 | COG2801 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008917_1453577 | AAL52578.1 | 33272 | COG2801 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008918_195542 | AAL53424.1 | 33272 | COG2801 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008918_196441 | AAL53425.1 | 33231 | COG2963 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008918_242480 | AAL53468.1 | 33231 | COG2963 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008917_1092804 | AAL52233.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008917_1043044 | AAL52182.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008917_1209738 | AAL52344.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008917_1459810 | AAL52591.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008917_1455807 | AAL52583.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008917_1093079 | AAL52234.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008918_757738 | AAL53961.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008918_757373 | AAL53960.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008918_755120 | AAL53958.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008918_751312 | AAL53952.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008918_465524 | AAL53687.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008917_1852501 | AAL52996.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008917_1852112 | AAL52995.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008917_1043433 | AAL52183.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008917_1210013 | AAL52345.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008917_1467885 | AAL52602.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008917_1460255 | AAL52593.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008917_1460103 | AAL52592.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008917_1458549 | AAL52588.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008917_1458274 | AAL52587.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008917_1457919 | AAL52586.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008917_1456244 | AAL52584.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008917_1454723 | AAL52581.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008917_1454571 | AAL52580.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008917_1454236 | AAL52579.1 | 33454 | COG3293 | Transposase and inactivated derivatives | TRANSPOSASE |
AE008917_37038 | AAL51222.1 | 32603 | COG4974 | Site-specific recombinase XerD | INTEGRASE/RECOMBINASE XERD |