| All COGs for bacillushalodurans : L |
| Genes (#) | COG | COG description |
| 2 | COG0178 | Excinuclease ATPase subunit |
| 2 | COG0187 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
| 2 | COG0188 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
| 2 | COG0210 | Superfamily I DNA and RNA helicases |
| 2 | COG0350 | Methylated DNA-protein cysteine methyltransferase |
| 2 | COG0389 | Nucleotidyltransferase/DNA polymerase involved in DNA repair |
| 3 | COG0513 | Superfamily II DNA and RNA helicases |
| 2 | COG0553 | Superfamily II DNA/RNA helicases, SNF2 family |
| 2 | COG0776 | Bacterial nucleoid DNA-binding protein |
| 2 | COG1193 | Mismatch repair ATPase (MutS family) |
| Included Genes in bacillushalodurans : L |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| BA000004_3694032 | BAB07313.1 | 5240 | COG0178 | Excinuclease ATPase subunit | excinuclease ABC (subunit A) |
| BA000004_774623 | BAB04433.1 | 5240 | COG0178 | Excinuclease ATPase subunit | excinuclease ABC (subunit A) |
| BA000004_5130 | BAB03725.1 | 4233 | COG0187 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit | DNA gyrase subunit B |
| BA000004_2268473 | BAB05859.1 | 4233 | COG0187 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit | DNA topoisomerase IV subunit B |
| BA000004_7065 | BAB03726.1 | 1817 | COG0188 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit | DNA gyrase subunit A |
| BA000004_2266020 | BAB05858.1 | 1817 | COG0188 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit | DNA topoisomerase IV subunit A |
| BA000004_2952811 | BAB06553.1 | 18279 | COG0210 | Superfamily I DNA and RNA helicases | ATP-dependent DNA helicase |
| BA000004_699605 | BAB04367.1 | 18279 | COG0210 | Superfamily I DNA and RNA helicases | ATP-dependent DNA helicase |
| BA000004_420919 | BAB04112.1 | 31928 | COG0350 | Methylated DNA-protein cysteine methyltransferase | O6-methylguanine-DNA alkyltransferase |
| BA000004_1101249 | BAB04740.1 | 31928 | COG0350 | Methylated DNA-protein cysteine methyltransferase | O6-methylguanine DNA alkyltransferase |
| BA000004_2865634 | BAB06460.1 | 19914 | COG0389 | Nucleotidyltransferase/DNA polymerase involved in DNA repair | ATP/GTP-binding protein (ImpB/MucB/SamB family) |
| BA000004_1551418 | BAB05191.1 | 19914 | COG0389 | Nucleotidyltransferase/DNA polymerase involved in DNA repair | |
| BA000004_3464647 | BAB07067.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | RNA helicase |
| BA000004_1468884 | BAB05104.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | ATP-dependent RNA helicase |
| BA000004_2504383 | BAB06103.1 | 33241 | COG0513 | Superfamily II DNA and RNA helicases | ATP-dependent RNA helicase |
| BA000004_2941747 | BAB06536.1 | 1013 | COG0553 | Superfamily II DNA/RNA helicases, SNF2 family | helicase (Snf2/Rad54 family) |
| BA000004_1041342 | BAB04688.1 | 1013 | COG0553 | Superfamily II DNA/RNA helicases, SNF2 family | SNF2 helicase |
| BA000004_3471792 | BAB07075.1 | 34486 | COG0776 | Bacterial nucleoid DNA-binding protein | non-specific DNA-binding protein II (HB) (HU) |
| BA000004_1400243 | BAB05028.1 | 34486 | COG0776 | Bacterial nucleoid DNA-binding protein | non-specific DNA-binding protein II (HB) (HU) |
| BA000004_404623 | BAB04095.1 | 2008 | COG1193 | Mismatch repair ATPase (MutS family) | DNA mismatch repair protein |
| BA000004_3222070 | BAB06825.1 | 2008 | COG1193 | Mismatch repair ATPase (MutS family) | DNA mismatch repair protein |
| Excluded Genes in bacillushalodurans : L |
| gene_id | protein_id | gene_family | cog | cog_description | product |
| BA000004_2582666 | BAB06184.1 | 32603 | COG0582 | Integrase | integrase/recombinase |
| BA000004_1606262 | BAB05248.1 | 32603 | COG0582 | Integrase | integrase/recombinase |
| BA000004_4137074 | BAB07718.1 | 33411 | COG1484 | DNA replication protein | transposase (26) |
| BA000004_4106714 | BAB07685.1 | 33411 | COG1484 | DNA replication protein | transposase (23) |
| BA000004_4137817 | BAB07719.1 | 33411 | COG1484 | DNA replication protein | transposase (27) |
| BA000004_3352876 | BAB06952.1 | 32768 | COG1943 | Transposase and inactivated derivatives | transposase (09) |
| BA000004_3576621 | BAB07185.1 | 32768 | COG1943 | Transposase and inactivated derivatives | transposase (09) |
| BA000004_2962650 | BAB06561.1 | 32768 | COG1943 | Transposase and inactivated derivatives | transposase (09) |
| BA000004_1718573 | BAB05361.1 | 32768 | COG1943 | Transposase and inactivated derivatives | transposase (09) |
| BA000004_1981147 | BAB05614.1 | 32768 | COG1943 | Transposase and inactivated derivatives | transposase (09) |
| BA000004_291039 | BAB03988.1 | 32768 | COG1943 | Transposase and inactivated derivatives | transposase (09) |
| BA000004_194272 | BAB03895.1 | 32768 | COG1943 | Transposase and inactivated derivatives | transposase (09) |
| BA000004_3587310 | BAB07197.1 | 32768 | COG1943 | Transposase and inactivated derivatives | transposase (09) |
| BA000004_3529870 | BAB07136.1 | 33272 | COG2801 | Transposase and inactivated derivatives | transposase (06) |
| BA000004_744360 | BAB04408.1 | 33272 | COG2801 | Transposase and inactivated derivatives | transposase (06) |
| BA000004_2463121 | BAB06062.1 | 33272 | COG2801 | Transposase and inactivated derivatives | transposase (06) |
| BA000004_356725 | BAB04054.1 | 33272 | COG2801 | Transposase and inactivated derivatives | transposase (06) |
| BA000004_3556108 | BAB07163.1 | 33272 | COG2801 | Transposase and inactivated derivatives | transposase (06) |
| BA000004_3611405 | BAB07222.1 | 33322 | COG2826 | Transposase and inactivated derivatives, IS30 family | transposase (10) |
| BA000004_2645647 | BAB06243.1 | 33322 | COG2826 | Transposase and inactivated derivatives, IS30 family | transposase (10) |
| BA000004_4089152 | BAB07669.1 | 33322 | COG2826 | Transposase and inactivated derivatives, IS30 family | transposase (10) |
| BA000004_3530697 | BAB07137.1 | 33231 | COG2963 | Transposase and inactivated derivatives | transposase (05) |
| BA000004_744034 | BAB04407.1 | 33231 | COG2963 | Transposase and inactivated derivatives | transposase (05) |
| BA000004_356399 | BAB04053.1 | 33231 | COG2963 | Transposase and inactivated derivatives | transposase (05) |
| BA000004_2462795 | BAB06061.1 | 33231 | COG2963 | Transposase and inactivated derivatives | transposase (05) |
| BA000004_3556935 | BAB07164.1 | 33231 | COG2963 | Transposase and inactivated derivatives | transposase (05) |
| BA000004_3570055 | BAB07177.1 | 34374 | COG3328 | Transposase and inactivated derivatives | transposase (04) |
| BA000004_381124 | BAB04075.1 | 34374 | COG3328 | Transposase and inactivated derivatives | transposase (04) |
| BA000004_415406 | BAB04106.1 | 34374 | COG3328 | Transposase and inactivated derivatives | transposase (04) |
| BA000004_988390 | BAB04634.1 | 34374 | COG3328 | Transposase and inactivated derivatives | transposase (04) |
| BA000004_330255 | BAB04030.1 | 34374 | COG3328 | Transposase and inactivated derivatives | transposase (04) |
| BA000004_745393 | BAB04409.1 | 34374 | COG3328 | Transposase and inactivated derivatives | transposase (04) |
| BA000004_2215885 | BAB05812.1 | 34374 | COG3328 | Transposase and inactivated derivatives | transposase (04) |
| BA000004_3085471 | BAB06684.1 | 34374 | COG3328 | Transposase and inactivated derivatives | transposase (04) |
| BA000004_3776115 | BAB07383.1 | 34374 | COG3328 | Transposase and inactivated derivatives | transposase (04) |
| BA000004_565572 | BAB04252.1 | 32799 | COG3344 | Retron-type reverse transcriptase | transposase (11) |
| BA000004_56938 | BAB03758.1 | 32799 | COG3344 | Retron-type reverse transcriptase | transposase (11) |
| BA000004_130700 | BAB03818.1 | 32799 | COG3344 | Retron-type reverse transcriptase | transposase (11) |
| BA000004_242716 | BAB03943.1 | 32799 | COG3344 | Retron-type reverse transcriptase | transposase (11) |
| BA000004_663032 | BAB04330.1 | 32799 | COG3344 | Retron-type reverse transcriptase | transposase (11) |
| BA000004_746734 | BAB04410.1 | 7217 | COG3385 | FOG: Transposase and inactivated derivatives | transposase (15) |
| BA000004_834193 | BAB04488.1 | 7217 | COG3385 | FOG: Transposase and inactivated derivatives | transposase (16) |
| BA000004_3873221 | BAB07471.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (01) |
| BA000004_3687451 | BAB07304.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (01) |
| BA000004_3367701 | BAB06966.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (02) |
| BA000004_3522449 | BAB07128.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (02) |
| BA000004_3616309 | BAB07226.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (02) |
| BA000004_2496604 | BAB06096.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (02) |
| BA000004_2596912 | BAB06196.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (02) |
| BA000004_2771928 | BAB06370.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (02) |
| BA000004_2899777 | BAB06493.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (01) |
| BA000004_3087677 | BAB06686.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (01) |
| BA000004_3035900 | BAB06641.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (02) |
| BA000004_3098672 | BAB06697.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (02) |
| BA000004_3251637 | BAB06856.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (01) |
| BA000004_1776570 | BAB05420.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (02) |
| BA000004_1758111 | BAB05405.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (02) |
| BA000004_2019825 | BAB05648.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (01) |
| BA000004_1126442 | BAB04768.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (01) |
| BA000004_1433166 | BAB05066.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (01) |
| BA000004_408755 | BAB04098.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (01) |
| BA000004_108136 | BAB03808.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (01) |
| BA000004_291658 | BAB03989.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (01) |
| BA000004_443760 | BAB04135.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (01) |
| BA000004_830902 | BAB04486.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (01) |
| BA000004_1422414 | BAB05057.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (02) |
| BA000004_1497609 | BAB05131.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (01) |
| BA000004_1465678 | BAB05100.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase related protein (17) |
| BA000004_1622118 | BAB05265.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (01) |
| BA000004_2058027 | BAB05682.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (02) |
| BA000004_2281074 | BAB05873.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase related protein (19) |
| BA000004_3606856 | BAB07218.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (01) |
| BA000004_3666876 | BAB07284.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (02) |
| BA000004_721433 | BAB04387.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (01) |
| BA000004_1277828 | BAB04902.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (02) |
| BA000004_267850 | BAB03964.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (01) |
| BA000004_2042307 | BAB05665.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (01) |
| BA000004_153213 | BAB03842.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (01) |
| BA000004_1025611 | BAB04673.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (02) |
| BA000004_1267263 | BAB04889.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (01) |
| BA000004_1397729 | BAB05026.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (01) |
| BA000004_1552896 | BAB05192.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (02) |
| BA000004_2324674 | BAB05923.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (02) |
| BA000004_2590982 | BAB06191.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (02) |
| BA000004_2761350 | BAB06360.1 | 6039 | COG3464 | Transposase and inactivated derivatives | transposase (02) |
| BA000004_3824532 | BAB07423.1 | 8776 | COG3547 | Transposase and inactivated derivatives | transposase (03) |
| BA000004_1069479 | BAB04712.1 | 8776 | COG3547 | Transposase and inactivated derivatives | transposase (03) |
| BA000004_1625711 | BAB05267.1 | 8776 | COG3547 | Transposase and inactivated derivatives | transposase (03) |
| BA000004_4179651 | BAB07760.1 | 8776 | COG3547 | Transposase and inactivated derivatives | |
| BA000004_3573158 | BAB07180.1 | 8776 | COG3547 | Transposase and inactivated derivatives | transposase (03) |
| BA000004_1391974 | BAB05020.1 | 8776 | COG3547 | Transposase and inactivated derivatives | transposase (03) |
| BA000004_1300141 | BAB04926.1 | 8776 | COG3547 | Transposase and inactivated derivatives | transposase (03) |
| BA000004_461345 | BAB04153.1 | 8776 | COG3547 | Transposase and inactivated derivatives | transposase (03) |
