All COGs for yersiniapestisco92 : K
Genes (#)COGCOG description
1COG0085DNA-directed RNA polymerase, beta subunit/140 kD subunit
1COG0086DNA-directed RNA polymerase, beta' subunit/160 kD subunit
2COG0317Guanosine polyphosphate pyrophosphohydrolases/synthetases
4COG0513Superfamily II DNA and RNA helicases
3COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
22COG0583Transcriptional regulator
14COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
2COG0782Transcription elongation factor
2COG0789Predicted transcriptional regulators
3COG1167Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
2COG1191DNA-directed RNA polymerase specialized sigma subunit
2COG1199Rad3-related DNA helicases
1COG1221Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
8COG1278Cold shock proteins
6COG1349Transcriptional regulators of sugar metabolism
2COG1396Predicted transcriptional regulators
4COG1522Transcriptional regulators
14COG1609Transcriptional regulators
3COG1737Transcriptional regulators
1COG1802Transcriptional regulators
2COG1846Transcriptional regulators
5COG1940Transcriptional regulator/sugar kinase
2COG1959Predicted transcriptional regulator
4COG2186Transcriptional regulators
3COG2188Transcriptional regulators
6COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
4COG2207AraC-type DNA-binding domain-containing proteins
3COG2390Transcriptional regulator, contains sigma factor-related N-terminal domain
2COG2771DNA-binding HTH domain-containing proteins
1COG3283Transcriptional regulator of aromatic amino acids metabolism
1COG5007Predicted transcriptional regulator, BolA superfamily

Included Genes in yersiniapestisco92 : K
gene_idprotein_idgene_familycogcog_descriptionproduct
YPOCO92_4201613CAC93215.19296COG0085DNA-directed RNA polymerase, beta subunit/140 kD subunitDNA-directed RNA polymerase beta chain
YPOCO92_4197264CAC93214.19296COG0086DNA-directed RNA polymerase, beta' subunit/160 kD subunitDNA-directed RNA polymerase beta' chain
YPOCO92_3768708CAC92610.132745COG0317Guanosine polyphosphate pyrophosphohydrolases/synthetasesGTP pyrophosphokinase
YPOCO92_50305CAC88905.132745COG0317Guanosine polyphosphate pyrophosphohydrolases/synthetasesguanosine-3',5'-bisbis(diphosphate)3'-pyrophosphydrolase
YPOCO92_2022577CAC90594.133241COG0513Superfamily II DNA and RNA helicasesATP-dependent RNA helicase
YPOCO92_3034941CAC92947.133241COG0513Superfamily II DNA and RNA helicasesATP-dependent RNA helicase
YPOCO92_3895290CAC92717.133241COG0513Superfamily II DNA and RNA helicasescold-shock dead-box protein A
YPOCO92_4343947CAC93337.133241COG0513Superfamily II DNA and RNA helicasesputative DEAD-box helicase
YPOCO92_4277091CAC93278.14991COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)RNA polymerase sigma-32 factor
YPOCO92_699212CAC89497.14991COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)RNA polymerase sigma factor RpoD
YPOCO92_3744225CAC92585.14991COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)RNA polymerase sigma factor RpoS
YPOCO92_502057CAC89327.133815COG0583Transcriptional regulatortranscriptional activator protein NhaR
YPOCO92_275398CAC89139.133815COG0583Transcriptional regulatorputative LysR-family transcriptional regulator
YPOCO92_690801CAC89485.133815COG0583Transcriptional regulatorLysR-family regulatory protein
YPOCO92_728935CAC89523.133815COG0583Transcriptional regulatorLysR-family regulatory protein
YPOCO92_876844CAC89646.133815COG0583Transcriptional regulatortranscriptional activator protein LysR
YPOCO92_1169923CAC89871.133815COG0583Transcriptional regulatorglycine cleavage system transcriptional activator
YPOCO92_1317355CAC90010.133815COG0583Transcriptional regulatorputative LysR-family regulatory protein
YPOCO92_1469609CAC90138.133815COG0583Transcriptional regulatorputative LysR-family transcriptional regulatory protein
YPOCO92_1706334CAC90326.133815COG0583Transcriptional regulatorputative LysR-family transcriptional regulatory protein
YPOCO92_2186344CAC90744.133815COG0583Transcriptional regulatorprobable LysR-family transcriptional regulator
YPOCO92_2419170CAC90959.133815COG0583Transcriptional regulatorLysR-family transcriptional regulatory protein
YPOCO92_2682149CAC91193.133815COG0583Transcriptional regulatorLysR-family transcriptional regulatory protein
YPOCO92_2755992CAC91263.133815COG0583Transcriptional regulatorputative LysR-family transcriptional regulator
YPOCO92_2805967CAC91302.133815COG0583Transcriptional regulatorputativeLlysR-family transcriptional regulatory protein
YPOCO92_3139529CAC93041.133815COG0583Transcriptional regulatorputative LysR-family transcriptional regulatory protein
YPOCO92_3326714CAC92223.133815COG0583Transcriptional regulatorputative lysR-family transcriptional regulatory protein
YPOCO92_3953349CAC92774.133815COG0583Transcriptional regulatorlysR-family transcriptional regulatory protein
YPOCO92_4117798CAC93152.133815COG0583Transcriptional regulatorprobable lysR-family transcriptional regulatory protein
YPOCO92_4254451CAC93256.133815COG0583Transcriptional regulatorlysR-family transcriptional regulatory protein
YPOCO92_4397274CAC93381.133815COG0583Transcriptional regulatoroxidative stress transcriptional regulatory protein
YPOCO92_879311CAC89648.133815COG0583Transcriptional regulatorLysR-family transcriptional regulatory protein
YPOCO92_2871021CAC91358.133815COG0583Transcriptional regulatorLysR-family transcriptional regulatory protein
YPOCO92_1859917CAC90456.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domainresponse regulator protein
YPOCO92_3189777CAC92104.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domaintwo-component system response regulator
YPOCO92_3362417CAC92252.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domainputative two-component response regulator
YPOCO92_148695CAC88999.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domaintranscriptional regulatory protein
YPOCO92_4455313CAC93420.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domainputative response regulator protein
YPOCO92_3917555CAC92736.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domaintwo-component system response regulator
YPOCO92_3568572CAC92440.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domainphosphate regulon transcriptional regulatory protein
YPOCO92_3348209CAC92242.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domainputative two-component system response regulator
YPOCO92_3012648CAC92927.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domaintwo-component regulatory protein response regulator KdpE
YPOCO92_2595451CAC91113.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domaintwo-component regulatory system, response regulator protein
YPOCO92_2273770CAC90814.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domaintranscriptional activator
YPOCO92_981670CAC89740.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domainputative response regulator
YPOCO92_481575CAC89314.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domainaerobic respiration control protein
YPOCO92_83610CAC88940.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domaintwo component system response regulatory protein
YPOCO92_148044CAC88998.16876COG0782Transcription elongation factortranscription elongation factor
YPOCO92_3915367CAC92734.16876COG0782Transcription elongation factortranscription elongation factor
YPOCO92_235781CAC89096.117728COG0789Predicted transcriptional regulatorsMerR-family transcriptional regulator
YPOCO92_3440864CAC92327.117728COG0789Predicted transcriptional regulatorsputative regulatory protein
YPOCO92_2193069CAC90751.122905COG1167Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologsputative aminotransferase
YPOCO92_2226336CAC90775.16157COG1167Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologsputative GntR-family regulatory protein
YPOCO92_3176021CAC92097.16157COG1167Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologsputative GntR-family regulatory protein
YPOCO92_803710CAC89596.14991COG1191DNA-directed RNA polymerase specialized sigma subunitputative RNA polymerase sigma factor for flagellar operon
YPOCO92_2088117CAC90660.14991COG1191DNA-directed RNA polymerase specialized sigma subunitRNA polymerase sigma factor for flagellar operon
YPOCO92_2350433CAC90883.16067COG1199Rad3-related DNA helicasesputative DEAD box family helicase
YPOCO92_1356934CAC90044.16067COG1199Rad3-related DNA helicasesputative ATP-dependent helicase DinG
YPOCO92_2645159CAC91157.131616COG1221Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domainpsp operon transcriptional activator
YPOCO92_1989489CAC90565.132653COG1278Cold shock proteinscold shock protein
YPOCO92_1534391CAC90195.132653COG1278Cold shock proteinscold shock-like protein
YPOCO92_1883773CAC90477.132653COG1278Cold shock proteinscold shock protein
YPOCO92_2917054CAC92838.132653COG1278Cold shock proteinsputative cold shock protein
YPOCO92_4065083CAC93112.132653COG1278Cold shock proteinsmajor cold shock protein Cspa2
YPOCO92_4065555CAC93113.132653COG1278Cold shock proteinsmajor cold shock protein Cspa1
YPOCO92_1581996CAC90227.132653COG1278Cold shock proteinscold shock-like protein
YPOCO92_2984316CAC92898.132653COG1278Cold shock proteinscold shock protein
YPOCO92_911375CAC89678.134320COG1349Transcriptional regulators of sugar metabolismDeoR-family regulatory protein
YPOCO92_1396615CAC90071.134320COG1349Transcriptional regulators of sugar metabolismputative transcriptional regulatory protein
YPOCO92_1488332CAC90152.134320COG1349Transcriptional regulators of sugar metabolismdeoxyribose operon repressor
YPOCO92_3712002CAC92559.134320COG1349Transcriptional regulators of sugar metabolismputative deoR-family regulatory protein
YPOCO92_2196676CAC90753.134320COG1349Transcriptional regulators of sugar metabolismprobable deoR-family transcriptional regulatory protein
YPOCO92_128686CAC88984.134320COG1349Transcriptional regulators of sugar metabolismglycerol-3-phosphate repressor protein
YPOCO92_968547CAC89729.13967COG1396Predicted transcriptional regulatorsputative DNA binding protein
YPOCO92_4543227CAC93486.13967COG1396Predicted transcriptional regulatorsputative regulator
YPOCO92_804CAC88869.133976COG1522Transcriptional regulatorsregulatory protein
YPOCO92_1545754CAC90204.133976COG1522Transcriptional regulatorsleucine-responsive regulatory protein
YPOCO92_1876877CAC90473.133976COG1522Transcriptional regulatorsAsnC-family transcriptional regulatory protein
YPOCO92_3506992CAC92381.133976COG1522Transcriptional regulatorsprobable AsnC-family regulatory protein
YPOCO92_183067CAC89028.125605COG1609Transcriptional regulatorsLacI-family transcriptional regulator
YPOCO92_671532CAC89465.125605COG1609Transcriptional regulatorsLacI-family regulatory protein
YPOCO92_812567CAC89608.125605COG1609Transcriptional regulatorsLacI-family regulatory protein
YPOCO92_874348CAC89644.125605COG1609Transcriptional regulatorsgalactose operon repressor
YPOCO92_932764CAC89696.125605COG1609Transcriptional regulatorslactose operon repressor
YPOCO92_2681035CAC91192.125605COG1609Transcriptional regulatorspurine nucleotide synthesis repressor
YPOCO92_2883523CAC91370.125605COG1609Transcriptional regulatorsLacI-family transcriptional regulatory protein
YPOCO92_4133047CAC93166.125605COG1609Transcriptional regulatorstrehalose operon repressor
YPOCO92_4452730CAC93417.125605COG1609Transcriptional regulatorsgluconate utilization system Gnt-I transcriptional repressor
YPOCO92_1867622CAC90464.125605COG1609Transcriptional regulatorssucrose operon repressor LacI-family
YPOCO92_116150CAC88973.125605COG1609Transcriptional regulatorstranscriptional repressor
YPOCO92_2847916CAC91339.125605COG1609Transcriptional regulatorsputative LacI-family transcriptional regulatory protein
YPOCO92_2780052CAC91283.125605COG1609Transcriptional regulatorsLacI-family transcriptional regulatory protein
YPOCO92_2563325CAC91088.125605COG1609Transcriptional regulatorsputative LacI-family transcriptional regulatory protein
YPOCO92_2344763CAC90877.18467COG1737Transcriptional regulatorshex regulon repressor
YPOCO92_3372309CAC92260.18467COG1737Transcriptional regulatorsputative rpiR-family transcriptional regulatory protein
YPOCO92_3271775CAC92174.18467COG1737Transcriptional regulatorsputative RpiR-family transcriptional regulatory protein
YPOCO92_4071191CAC93120.132965COG1802Transcriptional regulatorsputative GntR-family transcriptional regulatory protein
YPOCO92_2666674CAC91179.135604COG1846Transcriptional regulatorsMarR-family transcriptional regulatory protein
YPOCO92_3637431CAC92500.135604COG1846Transcriptional regulatorsMarR-family transcriptional regulatory protein
YPOCO92_1853654CAC90451.122273COG1940Transcriptional regulator/sugar kinaseconserved hypothetical protein
YPOCO92_3373928CAC92263.122273COG1940Transcriptional regulator/sugar kinaseputative sugar kinase
YPOCO92_3577020CAC92445.122273COG1940Transcriptional regulator/sugar kinaseconserved hypothetical protein
YPOCO92_2550453CAC91072.133539COG1940Transcriptional regulator/sugar kinaseputative ROK family transcriptional regulatory protein
YPOCO92_2949792CAC92868.133539COG1940Transcriptional regulator/sugar kinaseputative N-acetylglucosamine regulatory protein
YPOCO92_3240230CAC92148.135488COG1959Predicted transcriptional regulatorconserved hypothetical protein
YPOCO92_394281CAC89238.135488COG1959Predicted transcriptional regulatorconserved hypothetical protein
YPOCO92_11016CAC88877.132965COG2186Transcriptional regulatorsputative GntR-famly transcriptional regulator
YPOCO92_619701CAC89433.132965COG2186Transcriptional regulatorsexu regulon transcriptional regulator
YPOCO92_1438210CAC90112.132965COG2186Transcriptional regulatorsputative transcriptional regulatory protein
YPOCO92_3823160CAC92650.132965COG2186Transcriptional regulatorspyruvate dehydrogenase complex repressor
YPOCO92_2240953CAC90787.134181COG2188Transcriptional regulatorsputative GntR-family transcriptional regulatory protein
YPOCO92_3864023CAC92685.134181COG2188Transcriptional regulatorsprobable gntR-family transcriptional regulatory protein
YPOCO92_2127967CAC90705.134181COG2188Transcriptional regulatorsGntR-family putative transcriptional regulatory protein
YPOCO92_1376533CAC90056.127701COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domainprobable two component response regulator component B
YPOCO92_2111798CAC90682.127701COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domainresponse regulator protein
YPOCO92_4522790CAC93471.127701COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domaintwo-component system response regulator
YPOCO92_2182012CAC90740.127701COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domainputative two-component response regulator
YPOCO92_3395130CAC92283.127701COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domainnitrate/nitrite response regulator protein NarP
YPOCO92_1798092CAC90398.127701COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domainputative GerR-family transcriptional regulatory protein
YPOCO92_2519275CAC91049.14471COG2207AraC-type DNA-binding domain-containing proteinsputative AraC-family transcriptional regulatory protein
YPOCO92_479842CAC89312.14471COG2207AraC-type DNA-binding domain-containing proteinsputative right origin-binding protein
YPOCO92_341050CAC89193.18420COG2207AraC-type DNA-binding domain-containing proteinsL-rhamnose operon regulatory protein
YPOCO92_342004CAC89194.18420COG2207AraC-type DNA-binding domain-containing proteinsL-rhamnose operon transcriptional activator
YPOCO92_3690760CAC92542.116407COG2390Transcriptional regulator, contains sigma factor-related N-terminal domainputative transcriptional regulatory protein
YPOCO92_3734812CAC92578.116407COG2390Transcriptional regulator, contains sigma factor-related N-terminal domaintranscriptional regulatory protein
YPOCO92_2613751CAC91129.116407COG2390Transcriptional regulator, contains sigma factor-related N-terminal domainputative transcriptional regulatory protein
YPOCO92_1091994CAC89829.18739COG2771DNA-binding HTH domain-containing proteinsquorum-sensing transcriptional regulator
YPOCO92_2754768CAC91262.18739COG2771DNA-binding HTH domain-containing proteinsquorum-sensing transcriptional activator YpeR
YPOCO92_2637850CAC91149.131616COG3283Transcriptional regulator of aromatic amino acids metabolismtranscriptional regulatory protein
YPOCO92_3983677CAC92799.134690COG5007Predicted transcriptional regulator, BolA superfamilyBolA-like protein

Excluded Genes in yersiniapestisco92 : K
gene_idprotein_idgene_familycogcog_descriptionproduct
YPOCO92_2818442CAC91313.134290COG0454Histone acetyltransferase HPA2 and related acetyltransferasesconserved hypothetical protein

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