All COGs for deinococcusradiodurans_r1 : K
Genes (#)COGCOG description
1COG0085DNA-directed RNA polymerase, beta subunit/140 kD subunit
1COG0086DNA-directed RNA polymerase, beta' subunit/160 kD subunit
4COG0454Histone acetyltransferase HPA2 and related acetyltransferases
2COG0583Transcriptional regulator
6COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
3COG0782Transcription elongation factor
4COG1167Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
4COG1309Transcriptional regulator
3COG1414Transcriptional regulator
2COG1475Predicted transcriptional regulators
2COG1522Transcriptional regulators
3COG1695Predicted transcriptional regulators
2COG1940Transcriptional regulator/sugar kinase
3COG1959Predicted transcriptional regulator
1COG2188Transcriptional regulators
5COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Included Genes in deinococcusradiodurans_r1 : K
gene_idprotein_idgene_familycogcog_descriptionproduct
AE000513_923560AAF10490.19296COG0085DNA-directed RNA polymerase, beta subunit/140 kD subunitDNA-directed RNA polymerase, beta subunit
AE000513_918781AAF10485.19296COG0086DNA-directed RNA polymerase, beta' subunit/160 kD subunitDNA-directed RNA polymerase, beta` subunit
AE000513_1068135AAF10624.128039COG0454Histone acetyltransferase HPA2 and related acetyltransferasesphosphinothricin acetyltransferase, putative
AE000513_1069192AAF10632.128039COG0454Histone acetyltransferase HPA2 and related acetyltransferaseshypothetical protein
AE000513_689369AAF10266.130515COG0454Histone acetyltransferase HPA2 and related acetyltransferaseshypothetical protein
AE000513_688880AAF10265.130515COG0454Histone acetyltransferase HPA2 and related acetyltransferaseshypothetical protein
AE001825_367818AAF12446.133815COG0583Transcriptional regulatortranscriptional regulator, HTH_1 family
AE000513_626751AAF10192.133815COG0583Transcriptional regulatortranscriptional regulator, LysR family
AE000513_796758AAF10359.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domainresponse regulator, OmpR/PhoB family
AE000513_2421284AAF11967.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domainDNA-binding response regulator
AE000513_2416984AAF11960.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domainDNA-binding response regulator
AE000513_2325282AAF11874.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domainresponse regulator
AE000513_759073AAF10321.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domainresponse regulator
AE000513_2238511AAF11793.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domainphosphate regulon transcriptional regulatory protein PhoB
AE000513_2376985AAF11920.16876COG0782Transcription elongation factortranscription elongation factor
AE000513_1172331AAF10735.16876COG0782Transcription elongation factortranscription elongation factor
AE000513_1990265AAF11523.16876COG0782Transcription elongation factortranscription elongation factor
AE000513_1042129AAF10603.122905COG1167Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologsaminotransferase, putative
AE000513_1607434AAF11148.122905COG1167Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologsaminotransferase, class I, putative
AE000513_852257AAF10417.16157COG1167Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologsregulatory protein MocR, putative
AE000513_1814915AAF11342.16157COG1167Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologsmocR protein
AE000513_1386243AAF10951.130201COG1309Transcriptional regulatortranscriptional repressor, TetR family
AE000513_2399542AAF11942.130201COG1309Transcriptional regulatortranscriptional repressor, TetR family
AE000513_1390186AAF10954.130201COG1309Transcriptional regulatortranscriptional regulator, TetR family
AE000513_71920AAF09664.130201COG1309Transcriptional regulatortranscriptional regulator, TetR family
AE001825_153598AAF12212.132577COG1414Transcriptional regulatortranscriptional regulator, IclR family
AE000513_1167114AAF10730.132577COG1414Transcriptional regulatortranscriptional regulator
AE000513_1224567AAF10789.132577COG1414Transcriptional regulatortranscriptional regulator, IclR family
AE001825_1432AAF12300.1436COG1475Predicted transcriptional regulatorschromosome partitioning protein, ParB family
AE000513_13333AAF09605.1436COG1475Predicted transcriptional regulatorschromosome partitioning protein
AE000513_1913643AAF11448.133976COG1522Transcriptional regulatorstranscriptional regulator, AsnC family
AE000513_203333AAF09787.133976COG1522Transcriptional regulatorstranscriptional regulator, Lrp/AsnC family
AE000513_1870891AAF11396.11496COG1695Predicted transcriptional regulatorsconserved hypothetical protein
AE000513_2640754AAF12165.11496COG1695Predicted transcriptional regulatorsconserved hypothetical protein
AE000513_1974797AAF11503.11496COG1695Predicted transcriptional regulatorsconserved hypothetical protein
AE000513_835370AAF10398.122273COG1940Transcriptional regulator/sugar kinaseROK family protein
AE000513_2293094AAF11841.122273COG1940Transcriptional regulator/sugar kinaseglucokinase
AE001825_253536AAF12395.135488COG1959Predicted transcriptional regulatorconserved hypothetical protein
AE000513_2105518AAF11645.135488COG1959Predicted transcriptional regulatorrrf2 protein
AE000513_2201595AAF11750.135488COG1959Predicted transcriptional regulatorconserved hypothetical protein
AE001825_221435AAF12419.134181COG2188Transcriptional regulatorstranscriptional regulator, GntR family
AE000513_430655AAF10009.127701COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domainDNA-binding response regulator
AE000513_899143AAF10469.127701COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domainDNA-binding response regulator
AE000513_1005049AAF10563.127701COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domainDNA-binding response regulator
AE001825_9816AAF12288.127701COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domainDNA-binding response regulator
AE000513_1577133AAF11120.127701COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domainDNA-binding response regulator

Excluded Genes in deinococcusradiodurans_r1 : K
gene_idprotein_idgene_familycogcog_descriptionproduct
AE000513_122858AAF09716.134290COG0454Histone acetyltransferase HPA2 and related acetyltransferasesacetyltransferase, putative
AE000513_685601AAF10251.134290COG0454Histone acetyltransferase HPA2 and related acetyltransferasesacetyltransferase, putative
AE000513_2434228AAF11973.134290COG0454Histone acetyltransferase HPA2 and related acetyltransferasesconserved hypothetical protein
AE000513_241049AAF09834.134290COG0454Histone acetyltransferase HPA2 and related acetyltransferaseshypothetical protein
AE000513_685167AAF10257.134290COG0454Histone acetyltransferase HPA2 and related acetyltransferaseshypothetical protein

Contact:
VIB / UGent
Bioinformatics & Evolutionary Genomics
Technologiepark 927
B-9052 Gent
BELGIUM
+32 (0) 9 33 13807 (phone)
+32 (0) 9 33 13809 (fax)
Don't hesitate to contact the in case of problems with the website!