All COGs for bacillushalodurans : K
Genes (#)COGCOG description
1COG0085DNA-directed RNA polymerase, beta subunit/140 kD subunit
1COG0086DNA-directed RNA polymerase, beta' subunit/160 kD subunit
1COG0454Histone acetyltransferase HPA2 and related acetyltransferases
3COG0513Superfamily II DNA and RNA helicases
2COG0553Superfamily II DNA/RNA helicases, SNF2 family
3COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
6COG0583Transcriptional regulator
4COG0640Predicted transcriptional regulators
16COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
4COG1167Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
4COG1191DNA-directed RNA polymerase specialized sigma subunit
3COG1221Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
10COG1309Transcriptional regulator
2COG1316Transcriptional regulator
2COG1329Transcriptional regulators, similar to M. xanthus CarD
5COG1349Transcriptional regulators of sugar metabolism
3COG1414Transcriptional regulator
2COG1475Predicted transcriptional regulators
2COG1476Predicted transcriptional regulators
4COG1522Transcriptional regulators
4COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
14COG1609Transcriptional regulators
2COG1695Predicted transcriptional regulators
5COG1725Predicted transcriptional regulators
6COG1733Predicted transcriptional regulators
2COG1737Transcriptional regulators
1COG1802Transcriptional regulators
6COG1940Transcriptional regulator/sugar kinase
2COG1954Glycerol-3-phosphate responsive antiterminator (mRNA-binding)
5COG1959Predicted transcriptional regulator
2COG2002Regulators of stationary/sporulation gene expression
2COG2186Transcriptional regulators
6COG2188Transcriptional regulators
10COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
3COG2207AraC-type DNA-binding domain-containing proteins

Included Genes in bacillushalodurans : K
gene_idprotein_idgene_familycogcog_descriptionproduct
BA000004_155663BAB03845.19296COG0085DNA-directed RNA polymerase, beta subunit/140 kD subunitDNA-directed RNA polymerase beta subunit
BA000004_159295BAB03846.19296COG0086DNA-directed RNA polymerase, beta' subunit/160 kD subunitDNA-directed RNA polymerase beta' subunit
BA000004_1525176BAB05157.14421COG0454Histone acetyltransferase HPA2 and related acetyltransferases
BA000004_3464647BAB07067.133241COG0513Superfamily II DNA and RNA helicasesRNA helicase
BA000004_1468884BAB05104.133241COG0513Superfamily II DNA and RNA helicasesATP-dependent RNA helicase
BA000004_2504383BAB06103.133241COG0513Superfamily II DNA and RNA helicasesATP-dependent RNA helicase
BA000004_2941747BAB06536.11013COG0553Superfamily II DNA/RNA helicases, SNF2 familyhelicase (Snf2/Rad54 family)
BA000004_1041342BAB04688.11013COG0553Superfamily II DNA/RNA helicases, SNF2 familySNF2 helicase
BA000004_1461302BAB05095.14991COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)RNA polymerase major sigma factor
BA000004_2678964BAB06275.14991COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)RNA polymerase sporulation mother cell-specific (early) sigma-29 factor
BA000004_1378498BAB05004.14991COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)RNA polymerase sigma factor (sigma K) precursor
BA000004_4061485BAB07644.11215COG0583Transcriptional regulatortranscriptional regulator (LysR family)
BA000004_1857331BAB05506.11215COG0583Transcriptional regulatortranscriptional regulator (LysR family)
BA000004_2829697BAB06431.133815COG0583Transcriptional regulatortranscriptional regulator (LysR family)
BA000004_911953BAB04558.133815COG0583Transcriptional regulatortranscriptional regulator
BA000004_2245071BAB05836.133815COG0583Transcriptional regulatortranscriptional regulator (LysR family)
BA000004_2226014BAB05821.133815COG0583Transcriptional regulatortranscriptional activator of the glutamate synthase operon (LysR family)
BA000004_3120785BAB06719.12326COG0640Predicted transcriptional regulatorstranscriptional regulator (ArsR family)
BA000004_750012BAB04413.12326COG0640Predicted transcriptional regulatorstranscriptional regulator (ArsR family)
BA000004_1012416BAB04664.12326COG0640Predicted transcriptional regulatorstranscriptional regulator (ArsR family)
BA000004_2210620BAB05805.12326COG0640Predicted transcriptional regulatorstranscriptional regulator (ArsR family)
BA000004_4162111BAB07746.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domaintwo-component response regulator
BA000004_4044369BAB07630.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domaintwo-component response regulator
BA000004_1250215BAB04872.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domaintwo-component response regulator
BA000004_311225BAB04007.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domaintwo-component response regulator
BA000004_818068BAB04474.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domaintwo-component response regulator
BA000004_891039BAB04539.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domaintwo-component response regulator
BA000004_1656452BAB05299.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domaintwo-component response regulator
BA000004_2389653BAB05983.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domaintwo-component response regulator
BA000004_2820717BAB06420.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domaintwo-component response regulator
BA000004_3274229BAB06876.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domaintwo-component response regulator involved in phosphate regulation
BA000004_3538718BAB07145.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domaintwo-component response regulator
BA000004_293244BAB03990.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domaintwo-component response regulator
BA000004_401097BAB04091.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domaintwo-component response regulator
BA000004_1269410BAB04891.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domaintwo-component response regulator
BA000004_1883069BAB05527.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domaintwo-component response regulator
BA000004_2039725BAB05663.127701COG0745Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domaintwo-component response regulator
BA000004_1222169BAB04846.122905COG1167Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologsaminotransferase
BA000004_611438BAB04297.16157COG1167Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologstranscriptional regulator (GntR family)
BA000004_2035641BAB05659.16157COG1167Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologstranscriptional regulator (GntR family)
BA000004_2813789BAB06414.16157COG1167Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologstranscriptional regulator (GntR family)
BA000004_2554839BAB06150.14991COG1191DNA-directed RNA polymerase specialized sigma subunitRNA polymerase sigma-D factor
BA000004_2678028BAB06273.14991COG1191DNA-directed RNA polymerase specialized sigma subunitRNA polymerase sporulation forespore-specific (late) sigma-G factor
BA000004_553422BAB04248.14991COG1191DNA-directed RNA polymerase specialized sigma subunitRNA polymerase general stress sigma factor(sigma B)
BA000004_1614327BAB05257.14991COG1191DNA-directed RNA polymerase specialized sigma subunitRNA polymerase sigma-F factor (stage II sporulation protein AC)
BA000004_1963010BAB05598.131616COG1221Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domaintranscriptional regulator (sigma-L-dependent)
BA000004_2892592BAB06485.131616COG1221Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domaintranscriptional regulator
BA000004_2862676BAB06458.131616COG1221Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domaintranscriptional regulator
BA000004_1913621BAB05555.120987COG1309Transcriptional regulator
BA000004_3856502BAB07452.120987COG1309Transcriptional regulatortranscriptional regulator (TetR/AcrR family)
BA000004_3452963BAB07051.123784COG1309Transcriptional regulator
BA000004_1078817BAB04721.123784COG1309Transcriptional regulatortranscriptional regulator (TetR family)
BA000004_3510648BAB07113.128073COG1309Transcriptional regulator
BA000004_780018BAB04438.128073COG1309Transcriptional regulatortranscriptional regulator (TetR/AcrR family)
BA000004_3216849BAB06821.12921COG1309Transcriptional regulatortranscriptional regulator (TetR/AcrR family)
BA000004_2273001BAB05864.12921COG1309Transcriptional regulatortranscriptional regulator (TetR/AcrR family)
BA000004_614532BAB04299.13227COG1309Transcriptional regulatortranscriptional regulator (TetR/AcrR family)
BA000004_455756BAB04147.13227COG1309Transcriptional regulatortranscriptional regulator (TetR/AcrR family)
BA000004_3750198BAB07366.133966COG1316Transcriptional regulatortranscriptional regulator
BA000004_3782911BAB07389.133966COG1316Transcriptional regulatorattenuator for lytABC and lytR expression
BA000004_1467311BAB05102.131941COG1329Transcriptional regulators, similar to M. xanthus CarDtranscriptional factor
BA000004_4071392BAB07654.131941COG1329Transcriptional regulators, similar to M. xanthus CarDtranscriptional regulator
BA000004_897723BAB04545.134320COG1349Transcriptional regulators of sugar metabolismtranscriptional repressor
BA000004_874106BAB04520.134320COG1349Transcriptional regulators of sugar metabolismtranscriptional regulator
BA000004_1633647BAB05272.134320COG1349Transcriptional regulators of sugar metabolismtranscriptional regulator (DeoR family)
BA000004_2293063BAB05887.134320COG1349Transcriptional regulators of sugar metabolismtranscriptional regulator (DeoR family)
BA000004_922256BAB04566.134320COG1349Transcriptional regulators of sugar metabolismtranscriptional repressor
BA000004_1893323BAB05538.132577COG1414Transcriptional regulatortranscriptional regulator (IclR family)
BA000004_3848537BAB07444.132577COG1414Transcriptional regulatortranscriptional regulator (IclR family)
BA000004_2264572BAB05856.132577COG1414Transcriptional regulatortranscriptional regulator (IclR family)
BA000004_4192710BAB07776.1436COG1475Predicted transcriptional regulatorsstage 0 sporulation protein J
BA000004_4194477BAB07778.1436COG1475Predicted transcriptional regulatorsDNA-binding protein Spo0J-like homolog
BA000004_394809BAB04083.11794COG1476Predicted transcriptional regulatorstranscriptional regulator
BA000004_487350BAB04179.11794COG1476Predicted transcriptional regulatorstranscriptional regulator
BA000004_227903BAB03931.133976COG1522Transcriptional regulatorstranscriptional regulator (Lrp/AsnC family)
BA000004_451343BAB04142.133976COG1522Transcriptional regulatorstranscriptional regulator
BA000004_940358BAB04587.133976COG1522Transcriptional regulatorstranscriptional regulator
BA000004_4007374BAB07596.133976COG1522Transcriptional regulatorstranscriptional regulator (Lrp/AsnC family)
BA000004_3477012BAB07081.135013COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
BA000004_674792BAB04339.135013COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 homologRNA polymerase ECF-type sigma factor
BA000004_283538BAB03982.135013COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 homologRNA polymerase ECF-type sigma factor
BA000004_2134035BAB05745.135013COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 homologRNA polymerase ECF-type sigma factor
BA000004_3347330BAB06949.125605COG1609Transcriptional regulatorstranscriptional regulator (LacI family)
BA000004_2342532BAB05938.125605COG1609Transcriptional regulatorstranscriptional regulator involved in degradation
BA000004_3037275BAB06642.125605COG1609Transcriptional regulatorstranscriptional regulator involved in carbon catabolite control
BA000004_2018587BAB05647.125605COG1609Transcriptional regulatorstranscriptional regulator (LacI family)
BA000004_974015BAB04620.125605COG1609Transcriptional regulatorstranscriptional regulator
BA000004_2353193BAB05946.125605COG1609Transcriptional regulatorstranscriptional regulator (AraC/XylS family)
BA000004_3850540BAB07446.125605COG1609Transcriptional regulatorstranscriptional repressor of the ribose operon
BA000004_2122208BAB05737.125605COG1609Transcriptional regulatorstranscriptional repressor (beta-galactosidase gene)
BA000004_1594512BAB05235.125605COG1609Transcriptional regulatorsglucose-resistance amylase regulator
BA000004_2435951BAB06032.125605COG1609Transcriptional regulatorstranscriptional regulator
BA000004_3360510BAB06960.125605COG1609Transcriptional regulatorstranscriptional regulator involved in carbon catabolite control
BA000004_3808830BAB07411.125605COG1609Transcriptional regulatorstranscriptional regulator
BA000004_1931921BAB05574.125605COG1609Transcriptional regulatorstranscriptional regulator
BA000004_1343984BAB04969.125605COG1609Transcriptional regulatorstranscriptional regulator (LacI family)
BA000004_4120237BAB07700.11496COG1695Predicted transcriptional regulators
BA000004_432501BAB04125.11496COG1695Predicted transcriptional regulators
BA000004_2768737BAB06366.135377COG1725Predicted transcriptional regulatorstranscriptional regulator (GntR family)
BA000004_1262517BAB04883.135377COG1725Predicted transcriptional regulatorstranscriptional regulator (GntR family)
BA000004_412630BAB04102.135377COG1725Predicted transcriptional regulatorstranscriptional regulator (GntR family)
BA000004_3600360BAB07211.135377COG1725Predicted transcriptional regulatorstranscriptional regulator (GntR family)
BA000004_705383BAB04370.135377COG1725Predicted transcriptional regulatorstranscriptional regulator (GntR family)
BA000004_1088327BAB04728.110791COG1733Predicted transcriptional regulators
BA000004_536355BAB04227.110791COG1733Predicted transcriptional regulators
BA000004_708747BAB04374.110791COG1733Predicted transcriptional regulators
BA000004_798248BAB04456.110791COG1733Predicted transcriptional regulatorscinnamoyl ester hydrolase
BA000004_4012701BAB07603.110791COG1733Predicted transcriptional regulators
BA000004_3430091BAB07022.110791COG1733Predicted transcriptional regulators
BA000004_2794969BAB06394.18467COG1737Transcriptional regulatorstranscriptional regulator (RpiR family)
BA000004_3678907BAB07295.18467COG1737Transcriptional regulatorstranscriptional regulator (hex regulon repressor)
BA000004_1143292BAB04781.132965COG1802Transcriptional regulatorstranscriptional regulator (GntR family)
BA000004_869630BAB04516.122273COG1940Transcriptional regulator/sugar kinaseglucose kinase
BA000004_1512180BAB05144.122273COG1940Transcriptional regulator/sugar kinaseglucose kinase
BA000004_853749BAB04505.122273COG1940Transcriptional regulator/sugar kinasetranscriptional regulator
BA000004_2883278BAB06477.133539COG1940Transcriptional regulator/sugar kinasetranscriptional repressor of the xylose operon
BA000004_1179894BAB04813.133539COG1940Transcriptional regulator/sugar kinasetranscriptional repressor of the xylose operon
BA000004_756753BAB04419.133539COG1940Transcriptional regulator/sugar kinasetranscriptional repressor of the xylose operon
BA000004_1176634BAB04810.13706COG1954Glycerol-3-phosphate responsive antiterminator (mRNA-binding)transcriptional antiterminator of glycerol uptake operon
BA000004_1157543BAB04794.13706COG1954Glycerol-3-phosphate responsive antiterminator (mRNA-binding)transcriptional antiterminator of glycerol uptake operon
BA000004_3243035BAB06844.135488COG1959Predicted transcriptional regulator
BA000004_1354675BAB04978.135488COG1959Predicted transcriptional regulator
BA000004_327296BAB04025.135488COG1959Predicted transcriptional regulator
BA000004_709259BAB04375.135488COG1959Predicted transcriptional regulator
BA000004_1136188BAB04776.135488COG1959Predicted transcriptional regulator
BA000004_65879BAB03769.12371COG2002Regulators of stationary/sporulation gene expressiontranscriptional pleiotropic regulator of transition state genes
BA000004_4121573BAB07701.12371COG2002Regulators of stationary/sporulation gene expressiontranscriptional pleiotropic regulator of transition state genes
BA000004_3284870BAB06886.132965COG2186Transcriptional regulatorstranscriptional regulator (GntR family)
BA000004_1912692BAB05554.132965COG2186Transcriptional regulatorstranscriptional regulator (GntR family)
BA000004_4052915BAB07636.134181COG2188Transcriptional regulatorstranscriptional regulator (GntR family)
BA000004_3445124BAB07042.134181COG2188Transcriptional regulatorstranscriptional regulator (GntR family)
BA000004_2514197BAB06113.134181COG2188Transcriptional regulatorstranscriptional regulator (GntR family)
BA000004_446868BAB04138.134181COG2188Transcriptional regulatorstranscriptional regulator (GntR family)
BA000004_946119BAB04592.134181COG2188Transcriptional regulatorstranscriptional repressor of the trehalose operon
BA000004_987400BAB04633.134181COG2188Transcriptional regulatorstranscriptional regulator (GntR family)
BA000004_425952BAB04117.127701COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domaintwo-component response regulator
BA000004_3729401BAB07347.127701COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domaintwo-component response regulator involved in degradative enzyme
BA000004_615114BAB04300.127701COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domaintwo-component response regulator
BA000004_1128982BAB04770.127701COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domaintwo-component response regulator
BA000004_2220217BAB05816.127701COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domaintwo-component response regulator
BA000004_2336283BAB05932.127701COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domaintwo-component response regulator
BA000004_2874209BAB06470.127701COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domaintwo-component response regulator
BA000004_3961548BAB07557.127701COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domaintwo-component response regulator
BA000004_1290956BAB04919.127701COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domaintwo-component response regulator
BA000004_2251525BAB05842.127701COG2197Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domaintwo-component response regulator
BA000004_3615215BAB07225.14471COG2207AraC-type DNA-binding domain-containing proteinstranscriptional regulator (AraC/XylS family)
BA000004_627526BAB04313.14471COG2207AraC-type DNA-binding domain-containing proteinstranscriptional regulator (AraC/XylS family)
BA000004_3734596BAB07353.14471COG2207AraC-type DNA-binding domain-containing proteinstranscriptional regulator (AraC/XylS family)

Excluded Genes in bacillushalodurans : K
gene_idprotein_idgene_familycogcog_descriptionproduct
BA000004_2283473BAB05876.134290COG0454Histone acetyltransferase HPA2 and related acetyltransferases
BA000004_454236BAB04145.134290COG0454Histone acetyltransferase HPA2 and related acetyltransferases
BA000004_1381009BAB05007.133892COG1396Predicted transcriptional regulatorstranscriptional repressor of PBSX genes
BA000004_1527875BAB05162.133892COG1396Predicted transcriptional regulatorstranscriptional regulator
BA000004_3650015BAB07268.133892COG1396Predicted transcriptional regulatorsimmunity repressor protein (phage-related protein)


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